(Linear) MAP of: ./Fgr-S_1_B01_T7.seq check: 2955 from: 1 to: 557 Fgr-S_1_B01_T7 0 0 0 1 557 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. BspMI EagI | BglI NotI | SmaI Bpu1102I BsrBI| | SrfI BseRI BssSI | || | | | | | TCGAGCGGCCGCCCGGGCAGGTGCGCCTTCGGGCACGGGGCACAGAAACGGAGGAGCAAATCCAAAAGCGACTAAGAAATGCTCGTGCTGAGCTTGACCA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 AGCTCGCCGGCGGGCCCGTCCACGCGGAAGCCCGTGCCCCGTGTCTTTGCCTCCTCGTTTAGGTTTTCGCTGATTCTTTACGAGCACGACTCGAACTGGT a S S G R P G R C A F G H G A Q K R R S K S K S D * E M L V L S L T S - b R A A A R A G A P S G T G H R N G G A N P K A T K K C S C * A * P - c E R P P G Q V R L R A R G T E T E E Q I Q K R L R N A R A E L D Q - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d L P R G P L H A K P C P A C F R L L L D L L S * S I S T S L K V - e S R G G P C T R R R A R P V S V S S C I W F R S L F A R A S S S W - f R A A A R A P A G E P V P C L F P P A F G F A V L F H E H Q A Q G - SexAI BclI SphI | | | GTCCAATTCACCAGGTCTTTTTGATCATCTTTTGGTAAATGATAACCTTGAAGCATGCTATGAGAATTTGAAGAAGATGCTTTCGTTGGATGATGACCAC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CAGGTTAAGTGGTCCAGAAAAACTAGTAGAAAACCATTTACTATTGGAACTTCGTACGATACTCTTAAACTTCTTCTACGAAAGCAACCTACTACTGGTG a P I H Q V F L I I F W * M I T L K H A M R I * R R C F R W M M T T - b V Q F T R S F * S S F G K * * P * S M L * E F E E D A F V G * * P Q - c S N S P G L F D H L L V N D N L E A C Y E N L K K M L S L D D D H - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d L G I * W T K K I M K Q Y I I V K F C A I L I Q L L H K R Q I I V V - e D L E G P R K S * R K T F S L R S A H * S F K F F I S E N S S S W - f T W N V L D K Q D D K P L H Y G Q L M S H S N S S S A K T P H H G - AAAGATTCAGATGGTTGTTTCATCGAGGATGGGAAAGCAACCGCATGTTATTCTATCCTGTCCAAAACAGAGTCAGAAGTTTTTTTGCAGTCTGAAACTG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TTTCTAAGTCTACCAACAAAGTAGCTCCTACCCTTTCGTTGGCGTACAATAAGATAGGACAGGTTTTGTCTCAGTCTTCAAAAAAACGTCAGACTTTGAC a K I Q M V V S S R M G K Q P H V I L S C P K Q S Q K F F C S L K L - b R F R W L F H R G W E S N R M L F Y P V Q N R V R S F F A V * N W - c K D S D G C F I E D G K A T A C Y S I L S K T E S E V F L Q S E T G - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d F I * I T T E D L I P F C G C T I R D Q G F C L * F N K Q L R F S - e L S E S P Q K M S S P F A V A H * E I R D L V S D S T K K C D S V - f C L N L H N N * R P H S L L R M N N * G T W F L T L L K K A T Q F Q - AceIII HindIII NheI SalI BspGI AflII | | | | | | GCGAAGTAGTAAAAGGAGCTGCAAGCTTGCTAGCGGTCGACTTATCCTCTCTCACAGGTGGCGCTCCTGGACGAACAAGAGGTCTTAAGATACACTCAAT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CGCTTCATCATTTTCCTCGACGTTCGAACGATCGCCAGCTGAATAGGAGAGAGTGTCCACCGCGAGGACCTGCTTGTTCTCCAGAATTCTATGTGAGTTA a A K * * K E L Q A C * R S T Y P L S Q V A L L D E Q E V L R Y T Q L - b R S S K R S C K L A S G R L I L S H R W R S W T N K R S * D T L N - c E V V K G A A S L L A V D L S S L T G G A P G R T R G L K I H S I - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d A F Y Y F S S C A Q * R D V * G R E C T A S R S S C S T K L Y V * - e P S T T F P A A L K S A T S K D E R V P P A G P R V L P R L I C E I - f R L L L L L Q L S A L P R S I R E * L H R E Q V F L L D * S V S L - MfeI Eco57I BsbI Eco57I | | | | TAACTCAATTGACAACGATCTGAAGGGCATTAGATAACCCAAAACATTCTTACAAACGATGTCGCAGAAGTGTTGACTGATGGATTTTGGATCAATTAGT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 ATTGAGTTAACTGTTGCTAGACTTCCCGTAATCTATTGGGTTTTGTAAGAATGTTTGCTACAGCGTCTTCACAACTGACTACCTAAAACCTAGTTAATCA a T Q L T T I * R A L D N P K H S Y K R C R R S V D * W I L D Q L V - b * L N * Q R S E G H * I T Q N I L T N D V A E V L T D G F W I N * * - c N S I D N D L K G I R * P K T F L Q T M S Q K C * L M D F G S I S - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d N V * N V V I Q L A N S L G F C E * L R H R L L T S Q H I K S * N T - e L E I S L S R F P M L Y G L V N K C V I D C F H Q S I S K P D I L - f * S L Q C R D S P C * I V W F M R V F S T A S T N V S P N Q I L * - GAGATATAACAGCTTCAGAAACATATTAGTTAGAGAAAAAGGACAACATAAGTGGGA 501 ---------+---------+---------+---------+---------+------- 557 CTCTATATTGTCGAAGTCTTTGTATAATCAATCTCTTTTTCCTGTTGTATTCACCCT a R Y N S F R N I L V R E K G Q H K W - b D I T A S E T Y * L E K K D N I S G - c E I * Q L Q K H I S * R K R T T * V G - 501 ---------+---------+---------+---------+---------+------- 557 d L Y L L K L F M N T L S F P C C L H S - e S I Y C S * F C I L * L F L V V Y T P - f H S I V A E S V Y * N S F F S L M L P - Enzymes that do cut: AceIII AflII BclI BglI Bpu1102I BsbI BseRI BspGI BspMI BsrBI BssSI EagI Eco57I HindIII MfeI NheI NotI SalI SexAI SmaI SphI SrfI Enzymes that do not cut: AatII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BfiI BglII BplI BpmI Bpu10I BsaI BsaBI BsaXI BsgI BsiWI BsmI BsmBI BspEI BspLU11I BsrDI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III EcoNI EcoRI EcoRV FseI FspI HgiEII HpaI KpnI MluI MscI NarI NcoI NdeI NgoAIV NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SanDI SapI ScaI SfiI SgfI SgrAI SnaBI SpeI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI