(Linear) MAP of: ./Fgr-S_1_B04_T7.seq check: 155 from: 1 to: 312 Fgr-S_1_B04_T7 0 0 0 1 312 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. ApaBI | GAGTAATTGCGATACTCTCTGGGAACTATCATTGTTCGGCAAGTTATGCTGCTCGCAGCCGATAACTACATGCAGTAAGGTACAAAGTCTGATACACAGT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTCATTAACGCTATGAGAGACCCTTGATAGTAACAAGCCGTTCAATACGACGAGCGTCGGCTATTGATGTACGTCATTCCATGTTTCAGACTATGTGTCA a E * L R Y S L G T I I V R Q V M L L A A D N Y M Q * G T K S D T Q C - b S N C D T L W E L S L F G K L C C S Q P I T T C S K V Q S L I H S - c V I A I L S G N Y H C S A S Y A A R S R * L H A V R Y K V * Y T V - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d L L Q S V R Q S S D N N P L N H Q E C G I V V H L L T C L R I C L - e Y N R Y E R P V I M T R C T I S S A A S L * M C Y P V F D S V C - f T I A I S E P F * * Q E A L * A A R L R Y S C A T L Y L T Q Y V T - BsrDI AlwNI BsaBI MscI|DraIII | XmnI | || | | | GCTGAAACGAAGATAAGTATCAGAGCTTGATATTGCTAGGGAAGTATCACAGGTTCAGAGAGCAATGGCCACACAGTGCCTGATCGAAGTAGTTCAGCTC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CGACTTTGCTTCTATTCATAGTCTCGAACTATAACGATCCCTTCATAGTGTCCAAGTCTCTCGTTACCGGTGTGTCACGGACTAGCTTCATCAAGTCGAG a * N E D K Y Q S L I L L G K Y H R F R E Q W P H S A * S K * F S S - b A E T K I S I R A * Y C * G S I T G S E S N G H T V P D R S S S A L - c L K R R * V S E L D I A R E V S Q V Q R A M A T Q C L I E V V Q L - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d A S V F I L I L A Q Y Q * P L I V P E S L L P W V T G S R L L E A - e H Q F S S L Y * L K I N S P F Y * L N L S C H G C L A Q D F Y N L E - f S F R L Y T D S S S I A L S T D C T * L A I A V C H R I S T T * S - BsbI AceIII | EarI | | PvuII BspMI SapI | | AceIII | SmaI | BpmI| | | Bpu10I | | PstI BfiI BsrDI SrfI | || | | | | | | | | | | TTCTGAGTGTTGCCTCCCTCCAGCTCTTTCCTCAGCTGCAGTGAGAAATCATCGTTCACGTCGTCATCATCCCAGTCATCCTCCCATTGCACCTGCCCGG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AAGACTCACAACGGAGGGAGGTCGAGAAAGGAGTCGACGTCACTCTTTAGTAGCAAGTGCAGCAGTAGTAGGGTCAGTAGGAGGGTAACGTGGACGGGCC a S E C C L P P A L S S A A V R N H R S R R H H P S H P P I A P A R - b L S V A S L Q L F P Q L Q * E I I V H V V I I P V I L P L H L P G - c F * V L P P S S S F L S C S E K S S F T S S S S Q S S S H C T C P G - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d R R L T A E R W S K G * S C H S I M T * T T M M G T M R G N C R G P - e E S H Q R G G A R E E A A T L F * R E R R * * G L * G G M A G A R - f K Q T N G G E L E K R L Q L S F D D N V D D D D W D D E W Q V Q G - EagI NotI BglI|BsrBI || | GCGGCCGCTCGA 301 ---------+-- 312 CGCCGGCGAGCT a A A A R - b R P L - c G R S - 301 ---------+-- 312 d R G S S - e A A A R - f P P R E - Enzymes that do cut: AceIII AlwNI ApaBI BfiI BglI BpmI Bpu10I BsaBI BsbI BspMI BsrBI BsrDI DraIII EagI EarI MscI NotI PstI PvuII SapI SmaI SrfI XmnI Enzymes that do not cut: AatII AflII AhdI ApaI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BglII BplI Bpu1102I BsaI BsaXI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DrdI DrdII EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SacI SacII SalI SanDI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI