(Linear) MAP of: ./Fgr-S_1_B05_T7.seq check: 4060 from: 1 to: 266 Fgr-S_1_B05_T7 0 0 0 1 266 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. DrdII NcoI BsmBI | MscI| BsmI | | || | TTCGTCTCCTGGAACCAATTTATAAGTCGTCGAATGGGCCACTGGCCATGGAATGCTCAGTGATAAAATTCTTAATCTTTTGCAGGGCCTCCACAGCAAT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 AAGCAGAGGACCTTGGTTAAATATTCAGCAGCTTACCCGGTGACCGGTACCTTACGAGTCACTATTTTAAGAATTAGAAAACGTCCCGGAGGTGTCGTTA a F V S W N Q F I S R R M G H W P W N A Q * * N S * S F A G P P Q Q Y - b S S P G T N L * V V E W A T G H G M L S D K I L N L L Q G L H S N - c R L L E P I Y K S S N G P L A M E C S V I K F L I F C R A S T A I - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d T E Q F W N I L R R I P W Q G H F A * H Y F E * D K A P G G C C - e R R R S G I * L D D F P G S A M S H E T I F N K I K Q L A E V A I - f E D G P V L K Y T T S H A V P W P I S L S L I R L R K C P R W L L - EarI RcaI SapI | | ATCAGTTGGGGTTAGCTGAGAGACATCATCATGACCCTTTTTAGCTGCAAGCTCTTCAAAAGAAACCCTCACATCGGCGTATGCGTAAGCATCCCCTCTT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TAGTCAACCCCAATCGACTCTCTGTAGTAGTACTGGGAAAAATCGACGTTCGAGAAGTTTTCTTTGGGAGTGTAGCCGCATACGCATTCGTAGGGGAGAA a Q L G L A E R H H H D P F * L Q A L Q K K P S H R R M R K H P L F - b I S W G * L R D I I M T L F S C K L F K R N P H I G V C V S I P S L - c S V G V S * E T S S * P F L A A S S S K E T L T S A Y A * A S P L - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d Y * N P N A S L C * * S G K * S C A R * F F G E C R R I R L C G R K - e D T P T L Q S V D D H G K K A A L E E F S V R V D A Y A Y A D G R - f I L Q P * S L S M M M V R K L Q L S K L L F G * M P T H T L M G E - Bpu1102I EagI | | TGCTCAGCGAGCACGCTGAGTTTCGTGAAAGCCTGACCTCGGCCGCGACCACGCXXXXXXXXXXXX 201 ---------+---------+---------+---------+---------+---------+------ 266 ACGAGTCGCTCGTGCGACTCAAAGCACTTTCGGACTGGAGCCGGCGCTGGTGCGXXXXXXXXXXXX a A Q R A R * V S * K P D L G R D H A ? ? ? - b L S E H A E F R E S L T S A A T T ? ? ? ? - c C S A S T L S F V K A * P R P R P R ? ? ? ? - 201 ---------+---------+---------+---------+---------+---------+------ 266 d A * R A R Q T E H F G S R P R S W A ? ? ? ? - e Q E A L V S L K T F A Q G R G R G R ? ? ? ? - f K S L S C A S N R S L R V E A A V V ? ? ? ? - Enzymes that do cut: Bpu1102I BsmI BsmBI DrdII EagI EarI MscI NcoI RcaI SapI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BfiI BglI BglII BplI BpmI Bpu10I BsaI BsaBI BsaXI BsbI BseRI BsgI BsiWI BspEI BspGI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI NarI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RsrII SacI SacII SalI SanDI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI