(Linear) MAP of: ./Fgr-S_1_B06_T7.seq check: 902 from: 1 to: 360 Fgr-S_1_B06_T7 0 0 0 1 360 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. EagI KpnI SpeI | | | GCGTGGTCGCGGCCGAGGTACCTTCTGCAAATTCGACTAGTTCACCTGACATTATTTCACCAAGACCTATAATACGAGCAATCCCATCCCCCACTTGAAC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGGAAGACGTTTAAGCTGATCAAGTGGACTGTAATAAAGTGGTTCTGGATATTATGCTCGTTAGGGTAGGGGGTGAACTTG a A W S R P R Y L L Q I R L V H L T L F H Q D L * Y E Q S H P P L E L - b R G R G R G T F C K F D * F T * H Y F T K T Y N T S N P I P H L N - c V V A A E V P S A N S T S S P D I I S P R P I I R A I P S P T * T - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P V K Q L N S * N V Q C * K V L V * L V L L G M G W K F - e H D R G L Y R R C I R S T * R V N N * W S R Y Y S C D W G G S S - f T T A A S T G E A F E V L E G S M I E G L G I I R A I G D G V Q V - SalI | TACGCGACCTATATTCTCAATCCCTACTTTCCTATTATATTGTTCAATACGTTCGCGGAGAATTTTATGAATTTCGTCGACTCGAAGGGTTGCCATTAGT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ATGCGCTGGATATAAGAGTTAGGGATGAAAGGATAATATAACAAGTTATGCAAGCGCCTCTTAAAATACTTAAAGCAGCTGAGCTTCCCAACGGTAATCA a R D L Y S Q S L L S Y Y I V Q Y V R G E F Y E F R R L E G L P L V - b Y A T Y I L N P Y F P I I L F N T F A E N F M N F V D S K G C H * C - c T R P I F S I P T F L L Y C S I R S R R I L * I S S T R R V A I S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d * A V * I R L G * K G I I N N L V N A S F K I F K T S E F P Q W * - e S R S R Y E * D R S E * * I T * Y T R P S N * S N R R S S P N G N T - f V R G I N E I G V K R N Y Q E I R E R L I K H I E D V R L T A M L - StuI VspI EarI | | | GTTTCTTGACTCTTTTTTCGGAAGCAAGGGGAAAAATAATGCCTAAATTCTAAACGAAAGTAGAAGTTCAAGGCCTAATTAATTTAATTATCTCTTCCAT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CAAAGAACTGAGAAAAAAGCCTTCGTTCCCCTTTTTATTACGGATTTAAGATTTGCTTTCATCTTCAAGTTCCGGATTAATTAAATTAATAGAGAAGGTA a F L D S F F G S K G K N N A * I L N E S R S S R P N * F N Y L F H - b F L T L F S E A R G K I M P K F * T K V E V Q G L I N L I I S S I - c V S * L F F R K Q G E K * C L N S K R K * K F K A * L I * L S L P F - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d H K K V R K E S A L P F I I G L N * V F T S T * P R I L K I I E E M - e N R S E K K P L L P F F L A * I R F S L L L E L G L * N L * R K W - f T E Q S K K R F C P S F Y H R F E L R F Y F N L A * N I * N D R G - EagI NotI BglI| BspMI|| SspI SmaI ||| SanDI BsmI | SrfI |||BsrBI | | | | ||| | TCCAGGGACCCGAGAATGCCAATATTAGCACGAATCGTACCTGCCCGGGCGGCCGCTCGA 301 ---------+---------+---------+---------+---------+---------+ 360 AGGTCCCTGGGCTCTTACGGTTATAATCGTGCTTAGCATGGACGGGCCCGCCGGCGAGCT a S R D P R M P I L A R I V P A R A A A R - b P G T R E C Q Y * H E S Y L P G R P L - c Q G P E N A N I S T N R T C P G G R S - 301 ---------+---------+---------+---------+---------+---------+ 360 d G P V R S H W Y * C S D Y R G P R G S S - e E L S G L I G I N A R I T G A R A A A R - f N W P G S F A L I L V F R V Q G P P R E - Enzymes that do cut: BglI BsmI BspMI BsrBI EagI EarI KpnI NotI SalI SanDI SmaI SpeI SrfI SspI StuI VspI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BfiI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI Sse8387I Sse8647I SwaI Tth111I XbaI XcmI XhoI XmnI