(Linear) MAP of: ./Fgr-S_1_B07_T7.seq check: 3643 from: 1 to: 498 Fgr-S_1_B07_T7 0 0 0 1 498 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. EagI KpnI DraI BsaBI BpmI EcoRI | | | | | | GCGTGGTCGCGGCCGAGGTACCATCAATTTAAACCTCACTGATAAAAATCAAGATACAAAGTACATCAACAGACAAAGCCTCTCCAGGAATTCAGACAAA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGGTAGTTAAATTTGGAGTGACTATTTTTAGTTCTATGTTTCATGTAGTTGTCTGTTTCGGAGAGGTCCTTAAGTCTGTTT a A W S R P R Y H Q F K P H * * K S R Y K V H Q Q T K P L Q E F R Q S - b R G R G R G T I N L N L T D K N Q D T K Y I N R Q S L S R N S D K - c V V A A E V P S I * T S L I K I K I Q S T S T D K A S P G I Q T K - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P V M L K F R V S L F * S V F Y M L L C L R E L F E S L - e H D R G L Y W * N L G * Q Y F D L Y L T C * C V F G R W S N L C - f T T A A S T G D I * V E S I F I L I C L V D V S L A E G P I * V F - SphI | GCGGAGAACAGATCAGGACAGCGCATGCCACAATCAGCTAGTCCAACGTCAATCCATGTTCTGACTAGATGATGCGAACAATGTCGTCCCTTGTCATTAT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CGCCTCTTGTCTAGTCCTGTCGCGTACGGTGTTAGTCGATCAGGTTGCAGTTAGGTACAAGACTGATCTACTACGCTTGTTACAGCAGGGAACAGTAATA a G E Q I R T A H A T I S * S N V N P C S D * M M R T M S S L V I I - b A E N R S G Q R M P Q S A S P T S I H V L T R * C E Q C R P L S L S - c R R T D Q D S A C H N Q L V Q R Q S M F * L D D A N N V V P C H Y - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d A S F L D P C R M G C D A L G V D I W T R V L H H S C H R G K D N - e L P S C I L V A C A V I L * D L T L G H E S * I I R V I D D R T M I - f R L V S * S L A H W L * S T W R * D M N Q S S S A F L T T G Q * * - ApaBI BpmI PvuII| | || CCTGTTTGCATCTTGCATCCTCTCCAGGATGAACTCTACTTGGCCTCTAGTGTAAGCAACAGCTGCATCTCTGTTGACTGTTTGCTCAACTTCATCAATG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GGACAAACGTAGAACGTAGGAGAGGTCCTACTTGAGATGAACCGGAGATCACATTCGTTGTCGACGTAGAGACAACTGACAAACGAGTTGAAGTAGTTAC a L F A S C I L S R M N S T W P L V * A T A A S L L T V C S T S S M - b C L H L A S S P G * T L L G L * C K Q Q L H L C * L F A Q L H Q W - c P V C I L H P L Q D E L Y L A S S V S N S C I S V D C L L N F I N G - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d D Q K C R A D E G P H V R S P R * H L C C S C R Q Q S N A * S * * H - e R N A D Q M R E L I F E V Q G R T Y A V A A D R N V T Q E V E D I - f G T Q M K C G R W S S S * K A E L T L L L Q M E T S Q K S L K M L - NsiI BclI BclI BsrDI | | | | | GACATTTGATCAACATGGTTTGCCAGCACATGCTGTCCAAGAATTGCCTCAAATGCTTCCATTCTCTGTGAAGAAACATCCTGATCATTTGATGCATTGC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CTGTAAACTAGTTGTACCAAACGGTCGTGTACGACAGGTTCTTAACGGAGTTTACGAAGGTAAGAGACACTTCTTTGTAGGACTAGTAAACTACGTAACG a D I * S T W F A S T C C P R I A S N A S I L C E E T S * S F D A L P - b T F D Q H G L P A H A V Q E L P Q M L P F S V K K H P D H L M H C - c H L I N M V C Q H M L S K N C L K C F H S L * R N I L I I * C I A - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d V N S * C P K G A C A T W S N G * I S G N E T F F C G S * K I C Q - e S M Q D V H N A L V H Q G L I A E F A E M R Q S S V D Q D N S A N - f P C K I L M T Q W C M S D L F Q R L H K W E R H L F M R I M Q H M A - EagI NotI BglI| BspMI|| SmaI ||| Bpu10I BsrDI SrfI |||BsrBI | | | ||| | CTGAGCCTCCATCCACATCCATTGGGTCGTTGCCAGAGCTTCCATGCACATCTGCATTGCCACCGCTTGCACCTCCACCTGCCCGGGCGGCCGCTCGA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+-------- 498 GACTCGGAGGTAGGTGTAGGTAACCCAGCAACGGTCTCGAAGGTACGTGTAGACGTAACGGTGGCGAACGTGGAGGTGGACGGGCCCGCCGGCGAGCT a E P P S T S I G S L P E L P C T S A L P P L A P P P A R A A A R - b L S L H P H P L G R C Q S F H A H L H C H R L H L H L P G R P L - c * A S I H I H W V V A R A S M H I C I A T A C T S T C P G G R S - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+-------- 498 d R L R W G C G N P R Q W L K W A C R C Q W R K C R W R G P R G S S - e G S G G D V D M P D N G S S G H V D A N G G S A G G G A R A A A R - f Q A E M W M W Q T T A L A E M C M Q M A V A Q V E V Q G P P R E - Enzymes that do cut: ApaBI BclI BglI BpmI Bpu10I BsaBI BspMI BsrBI BsrDI DraI EagI EcoRI KpnI NotI NsiI PvuII SmaI SphI SrfI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BfiI BglII BplI Bpu1102I BsaI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI EcoRV FseI FspI HgiEII HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI