(Linear) MAP of: ./Fgr-S_1_B08_T7.seq check: 1974 from: 1 to: 350 Fgr-S_1_B08_T7 0 0 0 1 350 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. BspMI EagI | BglI NotI | SmaI BsrBI| | SrfI AceIII || | | | TCGAGCGGCCGCCCGGGCAGGTGGCGAGGGCCAGGATTGTCAATGCCGGTGGCGAGTGCCTTACCTTTGACCAGCTCGCGCTCCGTGCTCCGCTTGGACA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 AGCTCGCCGGCGGGCCCGTCCACCGCTCCCGGTCCTAACAGTTACGGCCACCGCTCACGGAATGGAAACTGGTCGAGCGCGAGGCACGAGGCGAACCTGT a S S G R P G R W R G P G L S M P V A S A L P L T S S R S V L R L D R - b R A A A R A G G E G Q D C Q C R W R V P Y L * P A R A P C S A W T - c E R P P G Q V A R A R I V N A G G E C L T F D Q L A L R A P L G Q - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d L P R G P L H R P G P N D I G T A L A K G K V L E R E T S R K S - e S R G G P C T A L A L I T L A P P S H R V K S W S A S R A G S P C - f R A A A R A P P S P W S Q * H R H R T G * R Q G A R A G H E A Q V - Bsu36I SanDI BglI BpmI NdeI BcgI | | | | | | GAACACGCTTCTCCTGAGGGGTCCCAAGAACGCCAGGGAGGCTGTTAGGCACTTTGGCAAGGCTCCAGGAGTGCCACACAGCCACACCAAGCCATATGTC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CTTGTGCGAAGAGGACTCCCCAGGGTTCTTGCGGTCCCTCCGACAATCCGTGAAACCGTTCCGAGGTCCTCACGGTGTGTCGGTGTGGTTCGGTATACAG a T R F S * G V P R T P G R L L G T L A R L Q E C H T A T P S H M S - b E H A S P E G S Q E R Q G G C * A L W Q G S R S A T Q P H Q A I C P - c N T L L L R G P K N A R E A V R H F G K A P G V P H S H T K P Y V - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d L V R K E Q P T G L V G P L S N P V K A L S W S H W V A V G L W I D - e F V S R R L P G L F A L S A T L C K P L A G P T G C L W V L G Y T - f S C A E G S P D W S R W P P Q * A S Q C P E L L A V C G C W A M H - BsrBI BcgI | | CGCTCCAAGGGCAGGAAATTCGAGAAGGCAAGAGGAAGGAGGAACAGCAGGGGCTTCAAGGTTTAAGCCGTGGAGTTTTCGGCACCCTTGTCACATTTGC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GCGAGGTTCCCGTCCTTTAAGCTCTTCCGTTCTCCTTCCTCCTTGTCGTCCCCGAAGTTCCAAATTCGGCACCTCAAAAGCCGTGGGAACAGTGTAAACG a A P R A G N S R R Q E E G G T A G A S R F K P W S F R H P C H I C - b L Q G Q E I R E G K R K E E Q Q G L Q G L S R G V F G T L V T F A - c R S K G R K F E K A R G R R N S R G F K V * A V E F S A P L S H L L - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d A G L A P F E L L C S S P P V A P A E L N L G H L K R C G Q * M Q - e R E L P L F N S F A L P L L F L L P K L T * A T S N E A G K D C K - f G S W P C S I R S P L L F S S C C P S * P K L R P T K P V R T V N A - EagI KpnI | | | TGTTATCGGTCAATCTTCACTTTTTTGGGTACCTCGGCCGCGACCACGCX 301 ---------+---------+---------+---------+---------+ 350 ACAATAGCCAGTTAGAAGTGAAAAAACCCATGGAGCCGGCGCTGGTGCGX a C Y R S I F T F L G T S A A T T - b V I G Q S S L F W V P R P R P R - c L S V N L H F F G Y L G R D H A - 301 ---------+---------+---------+---------+---------+ 350 d Q * R D I K V K K P V E A A V V ? - e S N D T L R * K K P Y R P R S W A - f T I P * D E S K Q T G R G R G R - Enzymes that do cut: AceIII BcgI BglI BpmI BspMI BsrBI Bsu36I EagI KpnI NdeI NotI SanDI SmaI SrfI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BclI BfiI BglII BplI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI MfeI MluI MscI NarI NcoI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI