(Linear) MAP of: ./Fgr-S_1_B09_T7.seq check: 8126 from: 1 to: 336 Fgr-S_1_B09_T7 0 0 0 1 336 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. EagI Eco57I | | GCGTGGTCGCGGCCGAGGTACTTTTTCAGCACAATATACAATGGTCAAAATATAAATTTTTCTGATAACCATGAACATTTTGACCTTATTCATTATGTAT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGAAAAAGTCGTGTTATATGTTACCAGTTTTATATTTAAAAAGACTATTGGTACTTGTAAAACTGGAATAAGTAATACATA a A W S R P R Y F F S T I Y N G Q N I N F S D N H E H F D L I H Y V F - b R G R G R G T F S A Q Y T M V K I * I F L I T M N I L T L F I M Y - c V V A A E V L F Q H N I Q W S K Y K F F * * P * T F * P Y S L C I - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P V K E A C Y V I T L I Y I K R I V M F M K V K N M I Y - e H D R G L Y K K L V I Y L P * F I F K E S L W S C K S R I * * T - f T T A A S T S K * C L I C H D F Y L N K Q Y G H V N Q G * E N H I - TCGATATACTTCAGTTTAGTTGAATTTCTTTATGAAGCCGATTATGAGCGCACTAATTTCCTCTGGCTTTTCTTCATTTATGAAATGCCCCACATCTTTC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 AGCTATATGAAGTCAAATCAACTTAAAGAAATACTTCGGCTAATACTCGCGTGATTAAAGGAGACCGAAAAGAAGTAAATACTTTACGGGGTGTAGAAAG a D I L Q F S * I S L * S R L * A H * F P L A F L H L * N A P H L S - b S I Y F S L V E F L Y E A D Y E R T N F L W L F F I Y E M P H I F H - c R Y T S V * L N F F M K P I M S A L I S S G F S S F M K C P T S F - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d E I Y K L K T S N R * S A S * S R V L K R Q S K K M * S I G W M K - e N S I S * N L Q I E K H L R N H A C * N G R A K R * K H F A G C R E - f R Y V E T * N F K K I F G I I L A S I E E P K E E N I F H G V D K - BsaI Bce83I SspI BglII | | | | ATTATCACCACGTCATCTAGTAATGGAACAAACTTCTTGAGACCACCTTTGTTAATGAAAACTTTTGCCCCTGCAATATTGTATGTTAGATCTAAGTTGC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TAATAGTGGTGCAGTAGATCATTACCTTGTTTGAAGAACTCTGGTGGAAACAATTACTTTTGAAAACGGGGACGTTATAACATACAATCTAGATTCAACG a L S P R H L V M E Q T S * D H L C * * K L L P L Q Y C M L D L S C - b Y H H V I * * W N K L L E T T F V N E N F C P C N I V C * I * V A - c I I T T S S S N G T N F L R P P L L M K T F A P A I L Y V R S K L P - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d * * * W T M * Y H F L S R S V V K T L S F K Q G Q L I T H * I * T A - e N D G R * R T I S C V E Q S W R Q * H F S K G R C Y Q I N S R L Q - f M I V V D D L L P V F K K L G G K N I F V K A G A I N Y T L D L N - EagI NotI BglI| BspMI|| SmaI ||| SrfI |||BsrBI | ||| | CAACTGTGAACTTCACCTGCCCGGGCGGCCGCTCGA 301 ---------+---------+---------+------ 336 GTTGACACTTGAAGTGGACGGGCCCGCCGGCGAGCT a Q L * T S P A R A A A R - b N C E L H L P G R P L - c T V N F T C P G G R S - 301 ---------+---------+---------+------ 336 d L Q S S * R G P R G S S - e W S H V E G A R A A A R - f G V T F K V Q G P P R E - Enzymes that do cut: Bce83I BglI BglII BsaI BspMI BsrBI EagI Eco57I NotI SmaI SrfI SspI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BcgI BclI BfiI BplI BpmI Bpu10I Bpu1102I BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI