(Linear) MAP of: ./Fgr-S_1_C05_T7.seq check: 3389 from: 1 to: 270 Fgr-S_1_C05_T7 0 0 0 1 270 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. EagI NcoI | | GCGTGGTCGCGGCCGAGGTACATTACCATGGCAGTTCAGGGGAAATGCAGAGAACAAGCCATTTCAGGCTTACACGCGCATACGCATCATAGACTACATA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGTAATGGTACCGTCAAGTCCCCTTTACGTCTCTTGTTCGGTAAAGTCCGAATGTGCGCGTATGCGTAGTATCTGATGTAT a A W S R P R Y I T M A V Q G K C R E Q A I S G L H A H T H H R L H I - b R G R G R G T L P W Q F R G N A E N K P F Q A Y T R I R I I D Y I - c V V A A E V H Y H G S S G E M Q R T S H F R L T R A Y A S * T T Y - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P V N G H C N L P F A S F L G N * A * V R M R M M S * M - e H D R G L Y M V M A T * P F H L S C A M E P K C A C V C * L S C - f T T A A S T C * W P L E P S I C L V L W K L S V R A Y A D Y V V Y - EcoNI NcoI BspMI | | | TATGAAACGGCCTTTGTTAGGCAGCAGAGTTTCCACAAGTCCATGGCTATGTCTTATTTATCTTCACCAGATGCACCAACAGCAGGTTATCCGGTTGACG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ATACTTTGCCGGAAACAATCCGTCGTCTCAAAGGTGTTCAGGTACCGATACAGAATAAATAGAAGTGGTCTACGTGGTTGTCGTCCAATAGGCCAACTGC a * N G L C * A A E F P Q V H G Y V L F I F T R C T N S R L S G * R - b Y E T A F V R Q Q S F H K S M A M S Y L S S P D A P T A G Y P V D E - c M K R P L L G S R V S T S P W L C L I Y L H Q M H Q Q Q V I R L T - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d Y S V A K T L C C L K W L D M A I D * K D E G S A G V A P * G T S - e I H F P R Q * A A S N G C T W P * T K N I K V L H V L L L N D P Q R - f I F R G K N P L L T E V L G H S H R I * R * W I C W C C T I R N V - EagI NotI BglI| BspMI|| NheI SmaI ||| Sse8647I PstI| SrfI |||BsrBI | || | ||| | AGGCAGCGTCCTCAGACAAGGACCTGGGCTGCAGCTAGCCTAGCAATCACCTGCCCGGGCGGCCGCTCGA 201 ---------+---------+---------+---------+---------+---------+---------+ 270 TCCGTCGCAGGAGTCTGTTCCTGGACCCGACGTCGATCGGATCGTTAGTGGACGGGCCCGCCGGCGAGCT a G S V L R Q G P G L Q L A * Q S P A R A A A R - b A A S S D K D L G C S * P S N H L P G R P L - c R Q R P Q T R T W A A A S L A I T C P G G R S - 201 ---------+---------+---------+---------+---------+---------+---------+ 270 d S A A D E S L S R P Q L * G L L * R G P R G S S - e P L T R L C P G P S C S A * C D G A R A A A R - f L C R G * V L V Q A A A L R A I V Q G P P R E - Enzymes that do cut: BglI BspMI BsrBI EagI EcoNI NcoI NheI NotI PstI SmaI SrfI Sse8647I Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BfiI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NdeI NgoAIV NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI