(Linear) MAP of: ./Fgr-S_3_A11_T7.seq check: 5482 from: 1 to: 432 Fgr-S_3_A11_T7 0 0 0 1 432 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. EagI BsaXI | | GCGTGGTCGCGGCCGAGGTGGGATATAATGGAGGTAATGTGGATTAGCAGTAGTAATTCCATGTGCTCCATATATAATTGTTTGACCTTGTTTTGTGGAT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCACCCTATATTACCTCCATTACACCTAATCGTCATCATTAAGGTACACGAGGTATATATTAACAAACTGGAACAAAACACCTA a A W S R P R W D I M E V M W I S S S N S M C S I Y N C L T L F C G L - b R G R G R G G I * W R * C G L A V V I P C A P Y I I V * P C F V D - c V V A A E V G Y N G G N V D * Q * * F H V L H I * L F D L V L W I - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P P I Y H L Y H P N A T T I G H A G Y I I T Q G Q K T S - e H D R G L H S I I S T I H I L L L L E M H E M Y L Q K V K N Q P - f T T A A S T P Y L P P L T S * C Y Y N W T S W I Y N N S R T K H I - SphI NsiI | BsrDI | | | TGACAAGCTGAGATATAATACTTCTCTTTATTCCATCCCGATGCATGCAGATTTTGAGCAATGGGTTCTTCAAGAGCCTGGTGCATAGGGTTGTGACCAA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ACTGTTCGACTCTATATTATGAAGAGAAATAAGGTAGGGCTACGTACGTCTAAAACTCGTTACCCAAGAAGTTCTCGGACCACGTATCCCAACACTGGTT a T S * D I I L L F I P S R C M Q I L S N G F F K S L V H R V V T N - b * Q A E I * Y F S L F H P D A C R F * A M G S S R A W C I G L * P T - c D K L R Y N T S L Y S I P M H A D F E Q W V L Q E P G A * G C D Q - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d Q C A S I Y Y K E K N W G S A H L N Q A I P E E L A Q H M P N H G - e N V L Q S I I S R K I G D R H M C I K L L P N K L L R T C L T T V L - f S L S L Y L V E R * E M G I C A S K S C H T R * S G P A Y P Q S W - BsgI Bce83I| Eco47III SexAI ||BsaI | | || | CGCGGAGAAAGAGCGCTTGTCGTTGGTGCTGGTCTATACATTGGAGCTAGAGACAGAGCTTGAGCCGGTGTCAGACCTGGTGGATGACAAGAGACCTGCA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GCGCCTCTTTCTCGCGAACAGCAACCACGACCAGATATGTAACCTCGATCTCTGTCTCGAACTCGGCCACAGTCTGGACCACCTACTGTTCTCTGGACGT a A E K E R L S L V L V Y T L E L E T E L E P V S D L V D D K R P A - b R R K S A C R W C W S I H W S * R Q S L S R C Q T W W M T R D L H - c R G E R A L V V G A G L Y I G A R D R A * A G V R P G G * Q E T C T - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d V R L F L A Q R Q H Q D I C Q L * L C L K L R H * V Q H I V L S R C - e A S F S R K D N T S T * V N S S S V S S S G T D S R T S S L L G A - f R P S L A S T T P A P R Y M P A L S L A Q A P T L G P P H C S V Q - BspMI RcaI BglII | | | CGATACATGAAGATCAAGCTCCACGACTACATGGAAAAATATCATGACACTTATGCCACAGGGACACTAGCCATCGACGGCGTGAAGATCTGAATATGAT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GCTATGTACTTCTAGTTCGAGGTGCTGATGTACCTTTTTATAGTACTGTGAATACGGTGTCCCTGTGATCGGTAGCTGCCGCACTTCTAGACTTATACTA a R Y M K I K L H D Y M E K Y H D T Y A T G T L A I D G V K I * I * F - b D T * R S S S T T T W K N I M T L M P Q G H * P S T A * R S E Y D - c I H E D Q A P R L H G K I S * H L C H R D T S H R R R E D L N M I - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S V H L D L E V V V H F F I M V S I G C P C * G D V A H L D S Y S - e R Y M F I L S W S * M S F Y * S V * A V P V S A M S P T F I Q I H - f V I C S S * A G R S C P F I D H C K H W L S V L W R R R S S R F I I - EagI NotI BglI| BspMI|| SmaI ||| SrfI |||BsrBI | ||| | TCTGATGTGTACCTGCCCGGGCGGCCGCTCGA 401 ---------+---------+---------+-- 432 AGACTACACATGGACGGGCCCGCCGGCGAGCT a * C V P A R A A A R - b S D V Y L P G R P L - c L M C T C P G G R S - 401 ---------+---------+---------+-- 432 d E S T Y R G P R G S S - e N Q H T G A R A A A R - f R I H V Q G P P R E - Enzymes that do cut: Bce83I BglI BglII BsaI BsaXI BsgI BspMI BsrBI BsrDI EagI Eco47III NotI NsiI RcaI SexAI SmaI SphI SrfI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BcgI BclI BfiI BplI BpmI Bpu10I Bpu1102I BsaBI BsbI BseRI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RsrII SacI SacII SalI SanDI SapI ScaI SfiI SgfI SgrAI SnaBI SpeI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI