(Linear) MAP of: ./Fgr-S_4_B12_T7.seq check: 6480 from: 1 to: 362 Fgr-S_4_B12_T7 0 0 0 1 362 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. EagI HindIII NheI | | | GCGTGGTCGCGGCCGAGGTCGCCGCTTGAACAATAGCATCCTCACGGGCACGGACTTGTGAATCAGCATGAATAAGAAAGAAGCTTCAAAGGCTAGCAGG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCAGCGGCGAACTTGTTATCGTAGGAGTGCCCGTGCCTGAACACTTAGTCGTACTTATTCTTTCTTCGAAGTTTCCGATCGTCC a A W S R P R S P L E Q * H P H G H G L V N Q H E * E R S F K G * Q E - b R G R G R G R R L N N S I L T G T D L * I S M N K K E A S K A S R - c V V A A E V A A * T I A S S R A R T C E S A * I R K K L Q R L A G - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d H D R G L D G S S C Y C G * P C P S T F * C S Y S L L K L P * C - e T T A A S T A A Q V I A D E R A R V Q S D A H I L F F S * L S A P - f R P R P R P R R K F L L M R V P V S K H I L M F L F S A E F A L L - PinAI SpeI | | AAATTTCTATCTTTTACAGACCGGTAGATTCTCCATTTTCTTCCTATATATATGTCTCTCGTAAGGATTAGTATGTAGACTTGTGTGCTTGTACTAGTTG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TTTAAAGATAGAAAATGTCTGGCCATCTAAGAGGTAAAAGAAGGATATATATACAGAGAGCATTCCTAATCATACATCTGAACACACGAACATGATCAAC a I S I F Y R P V D S P F S S Y I Y V S R K D * Y V D L C A C T S C - b K F L S F T D R * I L H F L P I Y M S L V R I S M * T C V L V L V A - c N F Y L L Q T G R F S I F F L Y I C L S * G L V C R L V C L Y * L - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d S I E I K * L G T S E G N E E * I Y T E R L S * Y T S K H A Q V L Q - e F K * R K C V P L N E M K K R Y I H R E Y P N T H L S T H K Y * N - f F N R D K V S R Y I R W K R G I Y I D R T L I L I Y V Q T S T S T - BglII BsgI | NsiI NdeI | | | | CTAGTGATGCTTTAGATCTTAGCAACTGCACCTAGCTACCTCATGGTTATGTATGCATACCTAGTATGTGTATGTAACAGGGAAGCATATGGAGTGGTTT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GATCACTACGAAATCTAGAATCGTTGACGTGGATCGATGGAGTACCAATACATACGTATGGATCATACACATACATTGTCCCTTCGTATACCTCACCAAA a * * C F R S * Q L H L A T S W L C M H T * Y V Y V T G K H M E W F - b S D A L D L S N C T * L P H G Y V C I P S M C M * Q G S I W S G F - c L V M L * I L A T A P S Y L M V M Y A Y L V C V C N R E A Y G V V L - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d * H H K L D * C S C R A V E H N H I C V * Y T Y T V P F C I S H N - e S T I S * I K A V A G L * R M T I Y A Y R T H T H L L S A Y P T T - f A L S A K S R L L Q V * S G * P * T H M G L I H I Y C P L M H L P K - EagI NotI BglI| BspMI|| SmaI ||| SrfI |||BsrBI | ||| | TGCCTCTTTGGTGCATTTGAGACAACTAGATGCCTACTGTACCTGCCCGGGCGGCCGCTCGA 301 ---------+---------+---------+---------+---------+---------+-- 362 ACGGAGAAACCACGTAAACTCTGTTGATCTACGGATGACATGGACGGGCCCGCCGGCGAGCT a C L F G A F E T T R C L L Y L P G R P L - b A S L V H L R Q L D A Y C T C P G G R S - c P L W C I * D N * M P T V P A R A A A R - 301 ---------+---------+---------+---------+---------+---------+-- 362 d Q R K P A N S V V L H R S Y R G P R G S S - e K G R Q H M Q S L * I G V T G A R A A A R - f A E K T C K L C S S A * Q V Q G P P R E - Enzymes that do cut: BglI BglII BsgI BspMI BsrBI EagI HindIII NdeI NheI NotI NsiI PinAI SmaI SpeI SrfI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BfiI BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HpaI KpnI MfeI MluI MscI NarI NcoI NgoAIV NruI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI