(Linear) MAP of: ./Fgr-S_4_F08_T7.seq check: 6366 from: 1 to: 679 Fgr-S_4_F08_T7 0 0 0 1 679 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. BspGI EagI AlwNI PstI | BcgI | | | | | GCGTGGTCGCGGCCGAGGTACTCACGGTTGCTTTTCTCCCTCTTTTCCCTTTTTCTATACCGGATTGTCGCAACCAGATGCTGCAGTCCAGGAGCTAGAG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGAGTGCCAACGAAAAGAGGGAGAAAAGGGAAAAAGATATGGCCTAACAGCGTTGGTCTACGACGTCAGGTCCTCGATCTC a A W S R P R Y S R L L F S L F S L F L Y R I V A T R C C S P G A R D - b R G R G R G T H G C F S P S F P F F Y T G L S Q P D A A V Q E L E - c V V A A E V L T V A F L P L F P F S I P D C R N Q M L Q S R S * R - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d T T A A S T S V T A K R G R K G K E I G S Q R L W I S C D L L * L - e R P R P R P V * P Q K E G E K G K K * V P N D C G S A A T W S S S - f H D R G L Y E R N S K E R K E R K R Y R I T A V L H Q L G P A L - BcgI BseRI StuI NheI | | | | ATCCCGAGGATGATGCTACATGGAGTTCGGCTTCGAGGAGTAGTTGGGAGGTCCCAGGCAGGAGGCCTTGCCTTTTCGATTGTTGCTACTTTTGTGCTAG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TAGGGCTCCTACTACGATGTACCTCAAGCCGAAGCTCCTCATCAACCCTCCAGGGTCCGTCCTCCGGAACGGAAAAGCTAACAACGATGAAAACACGATC a P E D D A T W S S A S R S S W E V P G R R P C L F D C C Y F C A S - b I P R M M L H G V R L R G V V G R S Q A G G L A F S I V A T F V L A - c S R G * C Y M E F G F E E * L G G P R Q E A L P F R L L L L L C * - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d D R P H H * M S N P K S S Y N P P G L C S A K G K R N N S S K H * - e I G L I I S C P T R S R P T T P L D W A P P R A K E I T A V K T S - f S G S S S A V H L E A E L L L Q S T G P L L G Q R K S Q Q * K Q A L - AflII BglI EcoNI MfeI XhoI | | | | | CCTTCTTAAGGCAAATCTGTTTAACTTATGTCTGTACTCAGACATTGTTGCTTCCGCTGACTCGTCTATGATCGAGCAATTGTATTCGAGCCCTCGAGGC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GGAAGAATTCCGTTTAGACAAATTGAATACAGACATGAGTCTGTAACAACGAAGGCGACTGAGCAGATACTAGCTCGTTAACATAAGCTCGGGAGCTCCG a L L K A N L F N L C L Y S D I V A S A D S S M I E Q L Y S S P R G - b F L R Q I C L T Y V C T Q T L L L P L T R L * S S N C I R A L E A - c P S * G K S V * L M S V L R H C C F R * L V Y D R A I V F E P S R P - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d G E * P L D T * S I D T S L C Q Q K R Q S T * S R A I T N S G E L - e A K K L C I Q K V * T Q V * V N N S G S V R R H D L L Q I R A R S A - f R R L A F R N L K H R Y E S M T A E A S E D I I S C N Y E L G R P - BsbI EcoRV BsaBI | | | CCCTGGCTTGTATTATGATGCTTGTATGACTTATTTATGTTGTAGAGTTGTGTTGTGATATCTTCCCGTGAGTCCCTGATCTTGATCGTACACATTTGCG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GGGACCGAACATAATACTACGAACATACTGAATAAATACAACATCTCAACACAACACTATAGAAGGGCACTCAGGGACTAGAACTAGCATGTGTAAACGC a P W L V L * C L Y D L F M L * S C V V I S S R E S L I L I V H I C V - b P G L Y Y D A C M T Y L C C R V V L * Y L P V S P * S * S Y T F A - c L A C I M M L V * L I Y V V E L C C D I F P * V P D L D R T H L R - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d G R A Q I I I S T H S I * T T S N H Q S I K G H T G S R S R V C K R - e G P K Y * S A Q I V * K H Q L T T N H Y R G T L G Q D Q D Y V N A - f G Q S T N H H K Y S K N I N Y L Q T T I D E R S D R I K I T C M Q - BsrDI | TGCATGATTAGTGTATGGTCAAATCGGGGGCGTCACAATTCCATTAGCAATGACAGGGAAATTACTATCAGAGAAGTGATAAATAAAGGTTGGGGGCTAT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 ACGTACTAATCACATACCAGTTTAGCCCCCGCAGTGTTAAGGTAATCGTTACTGTCCCTTTAATGATAGTCTCTTCACTATTTATTTCCAACCCCCGATA a H D * C M V K S G A S Q F H * Q * Q G N Y Y Q R S D K * R L G A M - b C M I S V W S N R G R H N S I S N D R E I T I R E V I N K G W G L C - c A * L V Y G Q I G G V T I P L A M T G K L L S E K * * I K V G G Y - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d A H N T Y P * I P P T V I G N A I V P F N S D S F H Y I F T P P * - e H M I L T H D F R P R * L E M L L S L S I V I L S T I F L P Q P S - f T C S * H I T L D P A D C N W * C H C P F * * * L L S L Y L N P A I - SspI | GTCTTTTAGAAGAACAATTTGTGGAGGATATGAAAATCTCTGGGATAGCCTAAAAAGGAGATGTGAGGAAATAATATTGCATGGAGGGAGGGACAAACCC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CAGAAAATCTTCTTGTTAAACACCTCCTATACTTTTAGAGACCCTATCGGATTTTTCCTCTACACTCCTTTATTATAACGTACCTCCCTCCCTGTTTGGG a S F R R T I C G G Y E N L W D S L K R R C E E I I L H G G R D K P - b L L E E Q F V E D M K I S G I A * K G D V R K * Y C M E G G T N P - c V F * K N N L W R I * K S L G * P K K E M * G N N I A W R E G Q T H - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d T K * F F L K H L I H F D R P Y G L F S I H P F L I A H L S P C V - e H R K S S C N T S S I F I E P I A * F P S T L F Y Y Q M S P P V F G - f D K L L V I Q P P Y S F R Q S L R F L L H S S I I N C P P L S L G - NdeI | ATATGGATACTGACTGCTAATAGGGAATTTACTGCTAAATCTTTATATCTGCATGTAGTTAAAATTGATGTTGGCTTTC 601 ---------+---------+---------+---------+---------+---------+---------+--------- 679 TATACCTATGACTGACGATTATCCCTTAAATGACGATTTAGAAATATAGACGTACATCAATTTTAACTACAACCGAAAG a I W I L T A N R E F T A K S L Y L H V V K I D V G F - b Y G Y * L L I G N L L L N L Y I C M * L K L M L A F - c M D T D C * * G I Y C * I F I S A C S * N * C W L - 601 ---------+---------+---------+---------+---------+---------+---------+--------- 679 d W I S V S Q * Y P I * Q * I K I D A H L * F Q H Q S E - e Y P Y Q S S I P F K S S F R * I Q M Y N F N I N A K - f M H I S V A L L S N V A L D K Y R C T T L I S T P K - Enzymes that do cut: AflII AlwNI BcgI BglI BsaBI BsbI BseRI BspGI BsrDI EagI EcoNI EcoRV MfeI NdeI NheI PstI SspI StuI XhoI Enzymes that do not cut: AatII AceIII AhdI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BclI BfiI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaXI BsgI BsiWI BsmI BsmBI BspEI BspLU11I BspMI BsrBI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoRI FseI FspI HgiEII HindIII HpaI KpnI MluI MscI NarI NcoI NgoAIV NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SwaI Tth111I VspI XbaI XcmI XmnI