(Linear) MAP of: ./Fgr-S_7_A12_T7.seq check: 7595 from: 1 to: 227 Fgr-S_7_A12_T7 0 0 0 1 227 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. HindIII PinAI | | ATAATAAAGAAGCTTCAAAGGCTATCAGGAAATATCTATCTTTTACAGACCGGTAGATTCTCCATTTTCTTCCTATATATATGTCTCTCGTAAGGATTAG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 TATTATTTCTTCGAAGTTTCCGATAGTCCTTTATAGATAGAAAATGTCTGGCCATCTAAGAGGTAAAAGAAGGATATATATACAGAGAGCATTCCTAATC a I I K K L Q R L S G N I Y L L Q T G R F S I F F L Y I C L S * G L V - b * * R S F K G Y Q E I S I F Y R P V D S P F S S Y I Y V S R K D * - c N K E A S K A I R K Y L S F T D R * I L H F L P I Y M S L V R I S - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I F F S * L S D P F I * R K C V P L N E M K K R Y I H R E Y P N - e L L S A E F A I L F Y R D K V S R Y I R W K R G I Y I D R T L I L - f Y Y L L K L P * * S I D I K * L G T S E G N E E * I Y T E R L S * - BglII ScaI BsgI | NsiI | | | | TATGTAGTACTTGTGTGCTTGTACTATTTGCTAGTGATGCTTTAGATCTTAGCAACTGCACCTAGCTACCTCATGGTTATGTATGCATACCTAGTATGTG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ATACATCATGAACACACGAACATGATAAACGATCACTACGAAATCTAGAATCGTTGACGTGGATCGATGGAGTACCAATACATACGTATGGATCATACAC a C S T C V L V L F A S D A L D L S N C T * L P H G Y V C I P S M C - b Y V V L V C L Y Y L L V M L * I L A T A P S Y L M V M Y A Y L V C V - c M * Y L C A C T I C * * C F R S * Q L H L A T S W L C M H T * Y V - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d T H L V Q T S T S N A L S A K S R L L Q V * S G * P * T H M G L I H - e I Y Y K H A Q V I Q * H H K L D * C S C R A V E H N H I C V * Y T - f Y T T S T H K Y * K S T I S * I K A V A G L * R M T I Y A Y R T H - NdeI | TATGTAACAGGGAAGCATATGGAGTGG 201 ---------+---------+------- 227 ATACATTGTCCCTTCGTATACCTCACC a M * Q G S I W S - b C N R E A Y G V - c Y V T G K H M E W - 201 ---------+---------+------- 227 d I Y C P L M H L P - e Y T V P F C I S H - f T H L L S A Y P T - Enzymes that do cut: BglII BsgI HindIII NdeI NsiI PinAI ScaI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BfiI BglI BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI EarI EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HpaI KpnI MfeI MluI MscI NarI NcoI NgoAIV NheI NotI NruI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI