(Linear) MAP of: ./Fgr-S_7_H09_T7.seq check: 1211 from: 1 to: 651 Fgr-S_7_H09_T7 0 0 0 1 651 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:33 .. BsrBI EagI BsaXI | | | | GCGTGGTCGCGGCCGAGGTACTCAGCATATAACAGGTTTTACCCATTGTATAAGCAGCAAAATTACACGACCATAGTAGAACAAAAACCACCGCTCCGAT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGAGTCGTATATTGTCCAAAATGGGTAACATATTCGTCGTTTTAATGTGCTGGTATCATCTTGTTTTTGGTGGCGAGGCTA a A W S R P R Y S A Y N R F Y P L Y K Q Q N Y T T I V E Q K P P L R F - b R G R G R G T Q H I T G F T H C I S S K I T R P * * N K N H R S D - c V V A A E V L S I * Q V L P I V * A A K L H D H S R T K T T A P I - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P V * C I V P K V W Q I L L L I V R G Y Y F L F W R E S - e H D R G L Y E A Y L L N * G N Y L C C F * V V M T S C F G G S R - f T T A A S T S L M Y C T K G M T Y A A F N C S W L L V F V V A G I - Bpu10I EcoRV | | TTACGATACGCAGCACCCGAGTAACAGGGTATTCGACTCCAAAAACGAAACTACCTAAGCTATTTTGAGAGCACAAGTTCCATACTAGGTTCGATATCCG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 AATGCTATGCGTCGTGGGCTCATTGTCCCATAAGCTGAGGTTTTTGCTTTGATGGATTCGATAAAACTCTCGTGTTCAAGGTATGATCCAAGCTATAGGC a T I R S T R V T G Y S T P K T K L P K L F * E H K F H T R F D I R - b L R Y A A P E * Q G I R L Q K R N Y L S Y F E S T S S I L G S I S E - c Y D T Q H P S N R V F D S K N E T T * A I L R A Q V P Y * V R Y P - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d K R Y A A G S Y C P I R S W F R F * R L * K S L V L E M S P E I D - e N V I R L V R T V P Y E V G F V F S G L S N Q S C L N W V L N S I R - f * S V C C G L L L T N S E L F S V V * A I K L A C T G Y * T R Y G - ScaI | AAGGATATATCAAGACTCTGAAAACCAAACGATAATACTGGTAAGCAGGACACCCAAACAGGCCACCGCACCGAAGGCAGATCAGTACTTGTAGTCCTTG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TTCCTATATAGTTCTGAGACTTTTGGTTTGCTATTATGACCATTCGTCCTGTGGGTTTGTCCGGTGGCGTGGCTTCCGTCTAGTCATGAACATCAGGAAC a R I Y Q D S E N Q T I I L V S R T P K Q A T A P K A D Q Y L * S L - b G Y I K T L K T K R * Y W * A G H P N R P P H R R Q I S T C S P * - c K D I S R L * K P N D N T G K Q D T Q T G H R T E G R S V L V V L D - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S P Y I L V R F V L R Y Y Q Y A P C G F L G G C R L C I L V Q L G Q - e L I Y * S E S F W V I I S T L L V G L C A V A G F A S * Y K Y D K - f F S I D L S Q F G F S L V P L C S V W V P W R V S P L D T S T T R - BplI EcoNI XmnI | | | ACGTGGAGGCTCTCAGAGGCCCCCTCGCCGAGGGTGGCATCGCCCTTGTAGGTGCCGAGGGTGGCCTCAGAGTTGGCCTTGCACCTCACCAGGAACGCCT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TGCACCTCCGAGAGTCTCCGGGGGAGCGGCTCCCACCGTAGCGGGAACATCCACGGCTCCCACCGGAGTCTCAACCGGAACGTGGAGTGGTCCTTGCGGA a T W R L S E A P S P R V A S P L * V P R V A S E L A L H L T R N A F - b R G G S Q R P P R R G W H R P C R C R G W P Q S W P C T S P G T P - c V E A L R G P L A E G G I A L V G A E G G L R V G L A P H Q E R L - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d R P P E * L G G R R P H C R G Q L H R P H G * L Q G Q V E G P V G - e V H L S E S A G E G L T A D G K Y T G L T A E S N A K C R V L F A - f S T S A R L P G R A S P P M A R T P A S P P R L T P R A G * W S R R - BglI StuI Bce83I BpmI NcoI | | | | | TCCTGGCCTTCTGCTCGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCTGCTGGAGGGCACGCCCGAAGGAGAAGGACAGGTTCCATGGCTTCTT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AGGACCGGAAGACGAGCAAGAGGTGGAACGGTCGGGTCCGGAACTCCCACGAGACGACCTCCCGTGCGGGCTTCCTCTTCCTGTCCAAGGTACCGAAGAA a L A F C S F S T L P A Q A L R V L C W R A R P K E K D R F H G F L - b S W P S A R S P P C Q P R P * G C S A G G H A R R R R T G S M A S W - c P G L L L V L H L A S P G L E G A L L E G T P E G E G Q V P W L L - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d E Q G E A R E G G Q W G L G Q P H E A P P C A R L L L V P E M A E - e K R A K Q E N E V K G A W A K L T S Q Q L A R G F S F S L N W P K K - f G P R R S T R W R A L G P R S P A R S S P V G S P S P C T G H S R - BsaI BseRI XhoI | BseRI | BbsI | | | | | GGTCTCGAGCTTGTTCATGGCGTTCAGGTTCAGGGTCGCCTCCTCCTCGCTCTGTCCACCAGAGAGGAAGACAATGGCTGGGACGGCAGCAGGGACAGTC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CCAGAGCTCGAACAAGTACCGCAAGTCCAAGTCCCAGCGGAGGAGGAGCGAGACAGGTGGTCTCTCCTTCTGTTACCGACCCTGCCGTCGTCCCTGTCAG a V S S L F M A F R F R V A S S S L C P P E R K T M A G T A A G T V - b S R A C S W R S G S G S P P P R S V H Q R G R Q W L G R Q Q G Q S - c G L E L V H G V Q V Q G R L L L A L S T R E E D N G W D G S R D S P - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d Q D R A Q E H R E P E P D G G G R E T W W L P L C H S P R C C P C D - e T E L K N M A N L N L T A E E E S Q G G S L F V I A P V A A P V T - f P R S S T * P T * T * P R R R R A R D V L S S S L P Q S P L L S L - BpmI Bsu36I | | CTCTGGAGGGTGCGGACGGTGTACTCAGCAATCACCTCAGGGGCCACCTTC 601 ---------+---------+---------+---------+---------+- 651 GAGACCTCCCACGCCTGCCACATGAGTCGTTAGTGGAGTCCCCGGTGGAAG a L W R V R T V Y S A I T S G A T F - b S G G C G R C T Q Q S P Q G P P - c L E G A D G V L S N H L R G H L - 601 ---------+---------+---------+---------+---------+- 651 d E P P H P R H V * C D G * P G G E - e R Q L T R V T Y E A I V E P A V K - f G R S P A S P T S L L * R L P W R - Enzymes that do cut: BbsI Bce83I BglI BplI BpmI Bpu10I BsaI BsaXI BseRI BsrBI Bsu36I EagI EcoNI EcoRV NcoI ScaI StuI XhoI XmnI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BcgI BclI BfiI BglII Bpu1102I BsaBI BsbI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BspMI BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoRI FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI SwaI Tth111I VspI XbaI XcmI