(Linear) MAP of: ./Fgr-S_8_A11_T7.seq check: 4420 from: 1 to: 268 Fgr-S_8_A11_T7 0 0 0 1 268 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:33 .. SexAI BfiI PflMI | | | AAACCCTTGATTTCACACCAGGTTGTTGAAGTGTTTACTTCACACACTGGGGCATTAACCCAACGAGTGGTCATGTGAAGGTTTAACCGAACACTGAAGT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 TTTGGGAACTAAAGTGTGGTCCAACAACTTCACAAATGAAGTGTGTGACCCCGTAATTGGGTTGCTCACCAGTACACTTCCAAATTGGCTTGTGACTTCA a K P L I S H Q V V E V F T S H T G A L T Q R V V M * R F N R T L K S - b N P * F H T R L L K C L L H T L G H * P N E W S C E G L T E H * S - c T L D F T P G C * S V Y F T H W G I N P T S G H V K V * P N T E V - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d V R S K V G P Q Q L T * K V C Q P M L G V L P * T F T * G F V S T - e F G Q N * V L N N F H K S * V S P C * G L S H D H S P K V S C Q L - f G K I E C W T T S T N V E C V P A N V W R T T M H L N L R V S F - Eco57I BbsI Sse8647I BsmBI BsaXI | | | | | CAAACTTCCCTTTCATTCAGAGAATCTGCCACTCGTCTTCTCCTGTTTCACCCGAGCCATCAAGGTCCTCCGCGTCGATGTTGTCGGAGACGCCGTATCC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTTTGAAGGGAAAGTAAGTCTCTTAGACGGTGAGCAGAAGAGGACAAAGTGGGCTCGGTAGTTCCAGGAGGCGCAGCTACAACAGCCTCTGCGGCATAGG a N F P F I Q R I C H S S S P V S P E P S R S S A S M L S E T P Y P - b Q T S L S F R E S A T R L L L F H P S H Q G P P R R C C R R R R I L - c K L P F H S E N L P L V F S C F T R A I K V L R V D V V G D A V S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d L S G K * E S F R G S T K E Q K V R A M L T R R T S T T P S A T D - e * V E R E N L S D A V R R R R N * G L W * P G G R R H Q R L R R I - f D F K G K M * L I Q W E D E G T E G S G D L D E A D I N D S V G Y G - BstXI BsrGI | | TGAACAGCCGGACCCATCATCCTGGTTGTACATCTGTTTCGACGGCTGACCTCGGGCGCGACCACGCX 201 ---------+---------+---------+---------+---------+---------+-------- 268 ACTTGTCGGCCTGGGTAGTAGGACCAACATGTAGACAAAGCTGCCGACTGGAGCCCGCGCTGGTGCGX a E Q P D P S S W L Y I C F D G * P R A R P R - b N S R T H H P G C T S V S T A D L G R D H A - c * T A G P I I L V V H L F R R L T S G A T T - 201 ---------+---------+---------+---------+---------+---------+-------- 268 d Q V A P G M M R T T C R N R R S V E P A V V ? - e R F L R V W * G P Q V D T E V A S R P R S W A - f S C G S G D D Q N Y M Q K S P Q G R A R G R - Enzymes that do cut: BbsI BfiI BsaXI BsmBI BsrGI BstXI Eco57I PflMI SexAI Sse8647I Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI Bce83I BcgI BclI BglI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsbI BseRI BsgI BsiWI BsmI BspEI BspGI BspLU11I BspMI BsrBI BsrDI BssHII BssSI Bst1107I BstEII Bsu36I ClaI DraI DraIII DrdI DrdII EagI EarI EciI Eco47III EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI