(Linear) MAP of: ./Fgr-S_9_B11_T7.seq check: 1490 from: 1 to: 653 Fgr-S_9_B11_T7 0 0 0 1 653 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:33 .. EagI KpnI SalI | | | GCGTGGTCGCGGCCGAGGTACCGCGCCGTCGACAGCAGGGGGCGCACCGTCGATTTTTACCTCTCGGCACGGCGCAACAGTAAAGCCGCATACCGCTTTA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGGCGCGGCAGCTGTCGTCCCCCGCGTGGCAGCTAAAAATGGAGAGCCGTGCCGCGTTGTCATTTCGGCGTATGGCGAAAT a A W S R P R Y R A V D S R G R T V D F Y L S A R R N S K A A Y R F M - b R G R G R G T A P S T A G G A P S I F T S R H G A T V K P H T A L - c V V A A E V P R R R Q Q G A H R R F L P L G T A Q Q * S R I P L Y - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d H D R G L Y R A T S L L P R V T S K * R E A R R L L L A A Y R K - e T T A A S T G R R R C C P A C R R N K G R P V A C C Y L R M G S * - f R P R P R P V A G D V A P P A G D I K V E R C P A V T F G C V A K - HindIII VspI | | TGGGAAAGCTTCTGAGTAAGGCGAAGCGCGGGCAAATTCCCCGGCTGATTAATACCGATAAAGCCCCAACATACGCGCGTGCGCTGGCGTTACTAAAGCG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ACCCTTTCGAAGACTCATTCCGCTTCGCGCCCGTTTAAGGGGCCGACTAATTATGGCTATTTCGGGGTTGTATGCGCGCACGCGACCGCAATGATTTCGC a G K L L S K A K R G Q I P R L I N T D K A P T Y A R A L A L L K R - b W E S F * V R R S A G K F P G * L I P I K P Q H T R V R W R Y * S A - c G K A S E * G E A R A N S P A D * Y R * S P N I R A C A G V T K A - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d I P F S R L L A F R P C I G R S I L V S L A G V Y A R A S A N S F R - e P F A E S Y P S A R A F E G A S * Y R Y L G L M R A H A P T V L A - f H S L K Q T L R L A P L N G P Q N I G I F G W C V R T R Q R * * L - BspMI EagI | NotI | BglI| | BspMI|| | BglI SmaI ||| | SmaI ApaBI SrfI ||| | SrfI BsrGI | | ||| | | | CGAAGGAAAATGTCCGCAGAATGTGCATCACCGGCAGATAAAGTACCTGCCCGGGCGGCCGCCCGGGCAGGTGTACACACTCTCACAAGCACAACCCCTA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GCTTCCTTTTACAGGCGTCTTACACGTAGTGGCCGTCTATTTCATGGACGGGCCCGCCGGCGGGCCCGTCCACATGTGTGAGAGTGTTCGTGTTGGGGAT a E G K C P Q N V H H R Q I K Y L P G R P P G Q V Y T L S Q A Q P L - b K E N V R R M C I T G R * S T C P G G R P G R C T H S H K H N P * - c R R K M S A E C A S P A D K V P A R A A A R A G V H T L T S T T P N - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S P F H G C F T C * R C I F Y R G P R G G P C T Y V S E C A C G R - e R L F I D A S H A D G A S L T G A R A A A R A P T C V R V L V V G - f A F S F T R L I H M V P L Y L V Q G P P R G P L H V C E * L C L G * - ScaI | ACTTCTTACCTTTTTTTTGTTTGTAATAAAGAGGCAAGCGGCACAACAAAGCATAAGTACTTATTAGTCTATATATAAATATGTATATATCGGCCCTTCA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TGAAGAATGGAAAAAAAACAAACATTATTTCTCCGTTCGCCGTGTTGTTTCGTATTCATGAATAATCAGATATATATTTATACATATATAGCCGGGAAGT a T S Y L F F V C N K E A S G T T K H K Y L L V Y I * I C I Y R P F T - b L L T F F L F V I K R Q A A Q Q S I S T Y * S I Y K Y V Y I G P S - c F L P F F C L * * R G K R H N K A * V L I S L Y I N M Y I S A L H - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d V E * R K K T Q L L S A L P V V F C L Y K N T * I Y I H I Y R G K - e L K K G K K Q K Y Y L P L R C L L A Y T S I L R Y I F I Y I D A R * - f S R V K K K N T I F L C A A C C L M L V * * D I Y L Y T Y I P G E - Eco57I BsrBI BseRI BsmI | Eco57I EarI | | | | | | | CTACAACAAGCGGCTATCTCCTCACACGGGAACCCTGAAGATGGATGAATGCTCCATGCACCAAAAACCTCTTTCCTCTCTTCAGGGAGCGGCGACGTTC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GATGTTGTTCGCCGATAGAGGAGTGTGCCCTTGGGACTTCTACCTACTTACGAGGTACGTGGTTTTTGGAGAAAGGAGAGAAGTCCCTCGCCGCTGCAAG a T T S G Y L L T R E P * R W M N A P C T K N L F P L F R E R R R S - b L Q Q A A I S S H G N P E D G * M L H A P K T S F L S S G S G D V L - c Y N K R L S P H T G T L K M D E C S M H Q K P L S S L Q G A A T F - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d V V V L P * R R V R S G Q L H I F A G H V L F R K G R K L S R R R E - e * L L R S D G * V P V R F I S S H E M C W F G R E E R * P A A V N - f S C C A A I E E C P F G S S P H I S W A G F V E K R E E P L P S T - XcmI BcgI BseRI PflMI| NcoI | BsrBI| BcgI BfiI BfiI || | | || | | | || TCCATGGCGAGCGGCGCAATCTCCTCGCCGATGACCCCTGGCTCGCTCCCCTCGACCCCCAGTTCCAGAAGCACGTCCTCCCAGTTCTTGGCTGGCCCCT 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 AGGTACCGCTCGCCGCGTTAGAGGAGCGGCTACTGGGGACCGAGCGAGGGGAGCTGGGGGTCAAGGTCTTCGTGCAGGAGGGTCAAGAACCGACCGGGGA a P W R A A Q S P R R * P L A R S P R P P V P E A R P P S S W L A P - b H G E R R N L L A D D P W L A P L D P Q F Q K H V L P V L G W P L - c S M A S G A I S S P M T P G S L P S T P S S R S T S S Q F L A G P F - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d G H R A A C D G R R H G R A R E G R G G T G S A R G G L E Q S A G - e E M A L P A I E E G I V G P E S G E V G L E L L V D E W N K A P G - f R W P S R R L R R A S S G Q S A G R S G W N W F C T R G T R P Q G R - PflMI | TCCAGGAGAGATCCTGGATCATGCAGTTCTTGACCATCTCATGGTAGGCTGGC 601 ---------+---------+---------+---------+---------+--- 653 AGGTCCTCTCTAGGACCTAGTACGTCAAGAACTGGTAGAGTACCATCCGACCG a S R R D P G S C S S * P S H G R L - b P G E I L D H A V L D H L M V G W - c Q E R S W I M Q F L T I S W * A G - 601 ---------+---------+---------+---------+---------+--- 653 d E L L S G P D H L E Q G D * P L S A - e K W S L D Q I M C N K V M E H Y A P - f G P S I R S * A T R S W R M T P Q - Enzymes that do cut: ApaBI BcgI BfiI BglI BseRI BsmI BspMI BsrBI BsrGI EagI EarI Eco57I HindIII KpnI NcoI NotI PflMI SalI ScaI SmaI SrfI VspI XcmI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaLI AscI AvrII BamHI BbsI Bce83I BclI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BsgI BsiWI BsmBI BspEI BspGI BspLU11I BsrDI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EciI Eco47III EcoNI EcoRI EcoRV FseI FspI HgiEII HpaI MfeI MluI MscI NarI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SanDI SapI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I XbaI XhoI XmnI