(Linear) MAP of: ./Fgr-S_9_C06_T7.seq check: 5571 from: 1 to: 651 Fgr-S_9_C06_T7 0 0 0 1 651 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:33 .. EagI BsaXI | | GCGTGGTCGCGGCCGAGGTACTGTATGCAAACAGGAGTCTTTGTAAACTGCTCATGGGTGATGGTGAAGGTGCTTTGTCAGATGCTCTCAGGTGCAGAAT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGACATACGTTTGTCCTCAGAAACATTTGACGAGTACCCACTACCACTTCCACGAAACAGTCTACGAGAGTCCACGTCTTA a A W S R P R Y C M Q T G V F V N C S W V M V K V L C Q M L S G A E C - b R G R G R G T V C K Q E S L * T A H G * W * R C F V R C S Q V Q N - c V V A A E V L Y A N R S L C K L L M G D G E G A L S D A L R C R M - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P V T H L C S D K Y V A * P H H H L H K T L H E * T C F - e H D R G L Y Q I C V P T K T F Q E H T I T F T S Q * I S E P A S - f T T A A S T S Y A F L L R Q L S S M P S P S P A K D S A R L H L I - BsmI BsgI HindIII Bce83I AceIII | | | | | GCTGCGGCCTGATTGTGCAAAAGCTTGCTACCGTCAAGCCACAGCTCACATGCTACTCAAGGAGTATAAACAAGCCTGTCATGCTCTCTTGGATGCACAA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CGACGCCGGACTAACACGTTTTCGAACGATGGCAGTTCGGTGTCGAGTGTACGATGAGTTCCTCATATTTGTTCGGACAGTACGAGAGAACCTACGTGTT a C G L I V Q K L A T V K P Q L T C Y S R S I N K P V M L S W M H K - b A A A * L C K S L L P S S H S S H A T Q G V * T S L S C S L G C T K - c L R P D C A K A C Y R Q A T A H M L L K E Y K Q A C H A L L D A Q - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d A A A Q N H L L K S G D L W L E C A V * P T Y V L R D H E R P H V - e H Q P R I T C F S A V T L G C S V H * E L L I F L G T M S E Q I C L - f S R G S Q A F A Q * R * A V A * M S S L S Y L C A Q * A R K S A C - BamHI BsmI RcaI EcoNI Eco57I | | | | | AAGCTGGATCCTGGGAATGCTGAAATTGAGCGTGAACTGCGGAAGGCTAGGGAACTCATGAAGAATCATCCTGCTGAAGGCGAGCAGTGAAGGGCGTGCA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TTCGACCTAGGACCCTTACGACTTTAACTCGCACTTGACGCCTTCCGATCCCTTGAGTACTTCTTAGTAGGACGACTTCCGCTCGTCACTTCCCGCACGT a S W I L G M L K L S V N C G R L G N S * R I I L L K A S S E G R A - b A G S W E C * N * A * T A E G * G T H E E S S C * R R A V K G V H - c K L D P G N A E I E R E L R K A R E L M K N H P A E G E Q * R A C M - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d F A P D Q S H Q F Q A H V A S P * P V * S S D D Q Q L R A T F P T C - e L Q I R P I S F N L T F Q P L S P F E H L I M R S F A L L S P R A - f F S S G P F A S I S R S S R F A L S S M F F * G A S P S C H L A H - ApaBI BspLU11I | BsbI PstI | | DrdII | | | | | TGTGTTGAACTGCAGGCTGCAACATGTGCCGGTTCTTACTAAAAGTGGAGTCAGCATCAACTTCTAATCCTTGTGTTTTTTATTTGAACCAAAAGGCTGA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 ACACAACTTGACGTCCGACGTTGTACACGGCCAAGAATGATTTTCACCTCAGTCGTAGTTGAAGATTAGGAACACAAAAAATAAACTTGGTTTTCCGACT a C V E L Q A A T C A G S Y * K W S Q H Q L L I L V F F I * T K R L K - b V L N C R L Q H V P V L T K S G V S I N F * S L C F L F E P K G * - c C * T A G C N M C R F L L K V E S A S T S N P C V F Y L N Q K A E - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d T N F Q L S C C T G T R V L L P T L M L K * D K H K K N S G F P Q - e H T S S C A A V H A P E * * F H L * C * S R I R T N K I Q V L L S - f M H Q V A P Q L M H R N K S F T S D A D V E L G Q T K * K F W F A S - NruI Eco57I |BbsI Bpu10I MscI | | | | | AACGTGTCGCGAATGTTGCGTCTTCAGATTGCTAAGGAGATGAGATTTTCTTGTCTGGCCCTTGGATCATAGTGGCCAGTTCCTTTTGCTTTTGGATGAG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 TTGCACAGCGCTTACAACGCAGAAGTCTAACGATTCCTCTACTCTAAAAGAACAGACCGGGAACCTAGTATCACCGGTCAAGGAAAACGAAAACCTACTC a R V A N V A S S D C * G D E I F L S G P W I I V A S S F C F W M S - b N V S R M L R L Q I A K E M R F S C L A L G S * W P V P F A F G * V - c T C R E C C V F R L L R R * D F L V W P L D H S G Q F L L L L D E - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d F T D R I N R R * I A L S I L N E Q R A R P D Y H G T G K A K P H - e F R T A F T A D E S Q * P S S I K K D P G Q I M T A L E K Q K Q I L - f V H R S H Q T K L N S L L H S K R T Q G K S * L P W N R K S K S S - BclI Bst1107I AlwNI RcaI | BsaI | | | | | | TATGTATGCAATTCCAATTATCCAGTTTCTGTGCAAGGCTTCTTATCTTTCATGATCACTCGGTCTCTCAGGTATACAAGTANGGTGGATTATTGTGTCT 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 ATACATACGTTAAGGTTAATAGGTCAAAGACACGTTCCGAAGAATAGAAAGTACTAGTGAGCCAGAGAGTCCATATGTTCATNCCACCTAATAACACAGA a M Y A I P I I Q F L C K A S Y L S * S L G L S G I Q V ? W I I V S - b C M Q F Q L S S F C A R L L I F H D H S V S Q V Y K ? G G L L C L - c Y V C N S N Y P V S V Q G F L S F M I T R S L R Y T S ? V D Y C V W - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d T H I C N W N D L K Q A L S R I K * S * E T E * T Y L Y P P N N H R - e I Y A I G I I W N R H L A E * R E H D S P R E P I C T ? H I I T D - f Y T H L E L * G T E T C P K K D K M I V R D R L Y V L ? T S * Q T - BsrGI DrdII | KpnI | | | GGTTCTTGTACATTTCCCTCAAATAAGAGCATATTTTTGCGGTACCTGCCC 601 ---------+---------+---------+---------+---------+- 651 CCAAGAACATGTAAAGGGAGTTTATTCTCGTATAAAAACGCCATGGACGGG a G S C T F P S N K S I F L R Y L P - b V L V H F P Q I R A Y F C G T C - c F L Y I S L K * E H I F A V P A - 601 ---------+---------+---------+---------+---------+- 651 d T R T C K G * I L A Y K Q P V Q G - e P E Q V N G E F L L M N K R Y R G - f Q N K Y M E R L Y S C I K A T G A - Enzymes that do cut: AceIII AlwNI ApaBI BamHI BbsI Bce83I BclI Bpu10I BsaI BsaXI BsbI BsgI BsmI BspLU11I BsrGI Bst1107I DrdII EagI Eco57I EcoNI HindIII KpnI MscI NruI PstI RcaI Enzymes that do not cut: AatII AflII AhdI ApaI ApaLI AscI AvrII BcgI BfiI BglI BglII BplI BpmI Bpu1102I BsaBI BseRI BsiWI BsmBI BspEI BspGI BspMI BsrBI BsrDI BssHII BssSI BstEII BstXI Bsu36I ClaI DraI DraIII DrdI EarI EciI Eco47III EcoRI EcoRV FseI FspI HgiEII HpaI MfeI MluI NarI NcoI NdeI NgoAIV NheI NotI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI