(Linear) MAP of: ./Fgr-S_9_F02_T7.seq check: 4575 from: 1 to: 251 Fgr-S_9_F02_T7 0 0 0 1 251 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:33 .. ApaBI | AAAATCCAAGGACACTCATAGGATAAGATTTGATAGCAGATCATGCAAATAAGTATATCAGGTATCAAACAAGATGTCCGAGAAGGCCAAAACAGAAATT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 TTTTAGGTTCCTGTGAGTATCCTATTCTAAACTATCGTCTAGTACGTTTATTCATATAGTCCATAGTTTGTTCTACAGGCTCTTCCGGTTTTGTCTTTAA a K I Q G H S * D K I * * Q I M Q I S I S G I K Q D V R E G Q N R N S - b K S K D T H R I R F D S R S C K * V Y Q V S N K M S E K A K T E I - c N P R T L I G * D L I A D H A N K Y I R Y Q T R C P R R P K Q K F - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I W P C E Y S L I Q Y C I M C I L I D P I L C S T R S P W F L F - e F G L V S M P Y S K I A S * A F L Y I L Y * V L H G L L G F C F N - f F D L S V * L I L N S L L D H L Y T Y * T D F L I D S F A L V S I - AflII BseRI BsaXI EciI | | | | CAGAAACTAGCACTTGATAACAACAGAACCCACTAGCTGCCTTAAGCATCTCATCACTTCTTCTCCTCCTTCTCCGCCTCGGCAGCCTTCTTCTGCCTGG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTCTTTGATCGTGAACTATTGTTGTCTTGGGTGATCGACGGAATTCGTAGAGTAGTGAAGAAGAGGAGGAAGAGGCGGAGCCGTCGGAAGAAGACGGACC a E T S T * * Q Q N P L A A L S I S S L L L L L L R L G S L L L P G - b Q K L A L D N N R T H * L P * A S H H F F S S F S A S A A F F C L A - c R N * H L I T T E P T S C L K H L I T S S P P S P P R Q P S S A W - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d E S V L V Q Y C C F G S A A K L M E D S R R R R R R R P L R R R G P - e L F * C K I V V S G V L Q R L C R M V E E G G E G G R C G E E A Q - f * F S A S S L L L V W * S G * A D * * K K E E K E A E A A K K Q R - BglI BspMI| SmaI || DrdII SrfI || | | || CTCCCAACTGGCGCTGGTTCATCCTCTCGACACCTGCCCGGGCGGCCXXXX 201 ---------+---------+---------+---------+---------+- 251 GAGGGTTGACCGCGACCAAGTAGGAGAGCTGTGGACGGGCCCGCCGGXXXX a S Q L A L V H P L D T C P G G ? - b P N W R W F I L S T P A R A A ? - c L P T G A G S S S R H L P G R P ? - 201 ---------+---------+---------+---------+---------+- 251 d E W S A S T * G R S V Q G P P ? ? - e S G V P A P E D E R C R G P R G ? - f A G L Q R Q N M R E V G A R A A ? - Enzymes that do cut: AflII ApaBI BglI BsaXI BseRI BspMI DrdII EciI SmaI SrfI Enzymes that do not cut: AatII AceIII AhdI AlwNI ApaI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BfiI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsbI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrBI BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI EagI EarI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI