(Linear) MAP of: ./Fgr-S_9_F06_T7.seq check: 9018 from: 1 to: 420 Fgr-S_9_F06_T7 0 0 0 1 420 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:33 .. EagI BbsI SacI | | | GCGTGGTCGCGGCCGAGGTGAGGAAGACAGGTATGGGAACTCAACCGTGGTGGAGAACACCGAGAAAGGCTGGAAAGAGCTCATCTTCCAGAGGATACGT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCACTCCTTCTGTCCATACCCTTGAGTTGGCACCACCTCTTGTGGCTCTTTCCGACCTTTCTCGAGTAGAAGGTCTCCTATGCA a A W S R P R * G R Q V W E L N R G G E H R E R L E R A H L P E D T C - b R G R G R G E E D R Y G N S T V V E N T E K G W K E L I F Q R I R - c V V A A E V R K T G M G T Q P W W R T P R K A G K S S S S R G Y V - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P S S S L Y P F E V T T S F V S F P Q F S S M K W L I R - e H D R G L H P L C T H S S L R P P S C R S L S S L A * R G S S V - f T T A A S T L F V P I P V * G H H L V G L F A P F L E D E L P Y T - BsgI | GCAGTGTTCGGTTTTGGGGTCTGAAAAAGCATCTTTGAGATCCATCTTCAATGAAGTCGATCCTGCCTTTTCATGGCTATCCATGTTTTGCTGTCTTAGT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CGTCACAAGCCAAAACCCCAGACTTTTTCGTAGAAACTCTAGGTAGAAGTTACTTCAGCTAGGACGGAAAAGTACCGATAGGTACAAAACGACAGAATCA a S V R F W G L K K H L * D P S S M K S I L P F H G Y P C F A V L V - b A V F G F G V * K S I F E I H L Q * S R S C L F M A I H V L L S * F - c Q C S V L G S E K A S L R S I F N E V D P A F S W L S M F C C L S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d A T N P K P T Q F L M K S I W R * H L R D Q R K M A I W T K S D * - e H L T R N Q P R F F C R Q S G D E I F D I R G K * P * G H K A T K T - f C H E T K P D S F A D K L D M K L S T S G A K E H S D M N Q Q R L - TTATTCGATGCTGATAGACACACAAAACTTAGTGAACTTCCGGGAATTGAAAAATACGTGTTACCTTGTATTCATCACGCTGGGTTGTGCTTTGAAGTCG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AATAAGCTACGACTATCTGTGTGTTTTGAATCACTTGAAGGCCCTTAACTTTTTATGCACAATGGAACATAAGTAGTGCGACCCAACACGAAACTTCAGC a Y S M L I D T Q N L V N F R E L K N T C Y L V F I T L G C A L K S - b I R C * * T H K T * * T S G N * K I R V T L Y S S R W V V L * S R - c L F D A D R H T K L S E L P G I E K Y V L P C I H H A G L C F E V V - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d N I R H Q Y V C L V * H V E P F Q F I R T V K Y E D R Q T T S Q L R - e * E I S I S V C F K T F K R S N F F V H * R T N M V S P Q A K F D - f K N S A S L C V F S L S S G P I S F Y T N G Q I * * A P N H K S T - RcaI NgoAIV | | TCACTCATGAAAGTTTGAGCTTGTGACTCATGTAGAGGCCGGCGAAAGATGGTCGCTGAGTGACTATTATTTTTGTTCCTTGCGTCTGTATGACATGGTA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 AGTGAGTACTTTCAAACTCGAACACTGAGTACATCTCCGGCCGCTTTCTACCAGCGACTCACTGATAATAAAAACAAGGAACGCAGACATACTGTACCAT a S L M K V * A C D S C R G R R K M V A E * L L F L F L A S V * H G T - b H S * K F E L V T H V E A G E R W S L S D Y Y F C S L R L Y D M V - c T H E S L S L * L M * R P A K D G R * V T I I F V P C V C M T W Y - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d * E H F N S S T V * T S A P S L H D S L S * * K Q E K R R Y S M T - e D S M F T Q A Q S E H L P R R F I T A S H S N N K N R A D T H C P - f T V * S L K L K H S M Y L G A F S P R Q T V I I K T G Q T Q I V H Y - BspMI SmaI | KpnI SrfI | | | | CCTGCCCGGGCGGTCGCTCG 401 ---------+---------+ 420 GGACGGGCCCGCCAGCGAGC a C P G G R S - b P A R A V A - c L P G R S L - 401 ---------+---------+ 420 d G A R A T A R - e V Q G P P R E - f R G P R D S - Enzymes that do cut: BbsI BsgI BspMI EagI KpnI NgoAIV RcaI SacI SmaI SrfI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI Bce83I BcgI BclI BfiI BglI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrBI BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RsrII SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI