(Linear) MAP of: ./Fgr-S_1_A03_T7.seq check: 7821 from: 1 to: 982 Fgr-S_1_A03_T7 982 85 217 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:33 .. EcoRI PflMI PstI|Bpu1102I | || | AGGTGGGGCNGTGTTTTGCAGNAAGCNAATCATTAGGACTCTACTTATATTAGCTCGGACGCCGCCATGTGATGGATTCTGCAGAATTCGGCTTAGCGTG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 TCCACCCCGNCACAAAACGTCNTTCGNTTAGTAATCCTGAGATGAATATAATCGAGCCTGCGGCGGTACACTACCTAAGACGTCTTAAGCCGAATCGCAC a R W G ? V L Q ? A N H * D S T Y I S S D A A M * W I L Q N S A * R G - b G G A V F C ? K ? I I R T L L I L A R T P P C D G F C R I R L S V - c V G ? C F A ? S ? S L G L Y L Y * L G R R H V M D S A E F G L A W - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d T P ? H K A ? L ? D N P S * K Y * S P R R W T I S E A S N P K A H - e P P A T N Q L ? ? I M L V R S I N A R V G G H S P N Q L I R S L T - f H P ? T K C ? A ? * * S E V * I L E S A A M H H I R C F E A * R - EagI EcoNI | | GTCGCGGCCGAGGTTTTTTTTTTTTTTTTTTTTTGTCCTATTTCGGCTTTTCCCCTGTTCAAAAGAAAAATTCAATTCCACCTTAAACAGGATTCATCTT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CAGCGCCGGCTCCAAAAAAAAAAAAAAAAAAAAACAGGATAAAGCCGAAAAGGGGACAAGTTTTCTTTTTAAGTTAAGGTGGAATTTGTCCTAAGTAGAA a R G R G F F F F F F L S Y F G F S P V Q K K N S I P P * T G F I F - b V A A E V F F F F F F C P I S A F P L F K R K I Q F H L K Q D S S S - c S R P R F F F F F F F V L F R L F P C S K E K F N S T L N R I H L - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d D R G L N K K K K K K T R N R S K G Q E F S F N L E V K F L I * R - e T A A S T K K K K K K Q G I E A K G R N L L F I * N W R L C S E D - f P R P R P K K K K K K K D * K P K E G T * F F F E I G G * V P N M K - NsiI BsbI | | CGGTAACATGGAAACTAATCCAAGAGGTGATGGAGTGGCGCTTTTCAGAGCCATTGGGAACTTAATCTGTATGCATCACCAACTGATGAGCCAACACCTG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GCCATTGTACCTTTGATTAGGTTCTCCACTACCTCACCGCGAAAAGTCTCGGTAACCCTTGAATTAGACATACGTAGTGGTTGACTACTCGGTTGTGGAC a G N M E T N P R G D G V A L F R A I G N L I C M H H Q L M S Q H L - b V T W K L I Q E V M E W R F S E P L G T * S V C I T N * * A N T C - c R * H G N * S K R * W S G A F Q S H W E L N L Y A S P T D E P T P A - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d R Y C P F * D L L H H L P A K * L W Q S S L R Y A D G V S S G V G - e E T V H F S I W S T I S H R K E S G N P V * D T H M V L Q H A L V Q - f P L M S V L G L P S P T A S K L A M P F K I Q I C * W S I L W C R - BglI BspMI| EcoRI BstXI EagI BamHI HindIII DrdII || | | | | | | CCGGGGGGGCGCTTCAAAACCGAATTCCAGCACACTGGCGGCCGTTACTAATGGATCCGACCTCCGTACCAAGCTTGGCGTAATCATGGTCATAACTGGT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GGCCCCCCCGCGAAGTTTTGGCTTAAGGTCGTGTGACCGCCGGCAATGATTACCTAGGCTGGAGGCATGGTTCGAACCGCATTAGTACCAGTATTGACCA a P G G R F K T E F Q H T G G R Y * W I R P P Y Q A W R N H G H N W F - b R G G A S K P N S S T L A A V T N G S D L R T K L G V I M V I T G - c G G A L Q N R I P A H W R P L L M D P T S V P S L A * S W S * L V - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d A P P A S * F R I G A C Q R G N S I S G V E T G L K A Y D H D Y S T - e R P P A E F G F E L V S A A T V L P D S R R V L S P T I M T M V P - f G P P R K L V S N W C V P P R * * H I R G G Y W A Q R L * P * L Q - TCCTGTGTGAAAATGTTATCCCCTCTCAATTCCACACCACATTCCACCCGGAAGCATAAAATGTAAAACCTGGGGTGCCTAATGAGTGAGCTAACTTACA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AGGACACACTTTTACAATAGGGGAGAGTTAAGGTGTGGTGTAAGGTGGGCCTTCGTATTTTACATTTTGGACCCCACGGATTACTCACTCGATTGAATGT a L C E N V I P S Q F H T T F H P E A * N V K P G V P N E * A N L H - b S C V K M L S P L N S T P H S T R K H K M * N L G C L M S E L T Y I - c P V * K C Y P L S I P H H I P P G S I K C K T W G A * * V S * L T - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d G T H F H * G R E I G C W M G G P L M F H L V Q P A * H T L * S V - e E Q T F I N D G R L E V G C E V R F C L I Y F R P H R I L S S V * - f N R H S F T I G E * N W V V N W G S A Y F T F G P T G L S H A L K C - VspI XmnI PvuII VspI SmaI BsaXI | | | | | | TTAATTGGGGTGCGCTTACTGCCCGCTTTTCAATCGGGAAACCTTTCGTGCCAGCTGCATTAATGAATCGGGCCACCCCCCGGGAGAAGCGGTTTGCCGA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 AATTAACCCCACGCGAATGACGGGCGAAAAGTTAGCCCTTTGGAAAGCACGGTCGACGTAATTACTTAGCCCGGTGGGGGGCCCTCTTCGCCAAACGGCT a * L G C A Y C P L F N R E T F R A S C I N E S G H P P G E A V C R - b N W G A L T A R F S I G K P F V P A A L M N R A T P R E K R F A D - c L I G V R L L P A F Q S G N L S C Q L H * * I G P P P G R S G L P I - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d N I P T R K S G A K * D P F R E H W S C * H I P G G G P L L P K G - e M L Q P A S V A R K E I P F G K T G A A N I F R A V G R S F R N A S - f * N P H A * Q G S K L R S V K R A L Q M L S D P W G G P S A T Q R - AlwNI PvuII | | | TTGGGGGCTGTTCCGCTTTCTTCCTCACTGACTTCCTGCTCTTGGTCGATCAGCTGCTGCGAGCCGGTTTATCTTACTCAAAAGGCGGGAATACTGGTTG 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 AACCCCCGACAAGGCGAAAGAAGGAGTGACTGAAGGACGAGAACCAGCTAGTCGACGACGCTCGGCCAAATAGAATGAGTTTTCCGCCCTTATGACCAAC a L G A V P L S S S L T S C S W S I S C C E P V Y L T Q K A G I L V V - b W G L F R F L P H * L P A L G R S A A A S R F I L L K R R E Y W L - c G G C S A F F L T D F L L L V D Q L L R A G L S Y S K G G N T G C - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d I P P Q E A K K R V S K R S K T S * S S R A P K D * E F P P F V P Q - e Q P S N R K R G * Q S G A R P R D A A A L R N I K S L L R S Y Q N - f N P A T G S E E E S V E Q E Q D I L Q Q S G T * R V * F A P I S T - FseI VspI NgoAIV | | | | TTCACCCGATTAGGGGATTAATCCCCGCAAGGAAACTTGTGATCCAAAAAGGCCACCAAAAAAGGCCGGCCAACCCGGTCAAAAAGGGCCGCGCTTGCTG 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 AAGTGGGCTAATCCCCTAATTAGGGGCGTTCCTTTGAACACTAGGTTTTTCCGGTGGTTTTTTCCGGCCGGTTGGGCCAGTTTTTCCCGGCGCGAACGAC a H P I R G L I P A R K L V I Q K G H Q K R P A N P V K K G R A C W - b F T R L G D * S P Q G N L * S K K A T K K G R P T R S K R A A L A G - c S P D * G I N P R K E T C D P K R P P K K A G Q P G Q K G P R L L - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d E G S * P I L G R L S V Q S G F L G G F F A P W G P * F P G R K S - e N V R N P S * D G C P F K H D L F A V L F P R G V R D F L A A S A - f T * G I L P N I G A L F S T I W F P W W F L G A L G T L F P R A Q Q - SmaI | GGCCGTTTTTTCAATTAGGGTTTCCTCCCCCCCTTGTTGAAACTTTTTACAAAAATTTCCCGCCTTCAAAGTATAAAGAGGGGGCGGGAACCCCCCCCCG 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 CCGGCAAAAAAGTTAATCCCAAAGGAGGGGGGGAACAACTTTGAAAAATGTTTTTAAAGGGCGGAAGTTTCATATTTCTCCCCCGCCCTTGGGGGGGGGC a A V F S I R V S S P P C * N F L Q K F P A F K V * R G G G N P P P - b P F F Q L G F P P P L V E T F Y K N F P P S K Y K E G A G T P P R - c G R F F N * G F L P P L L K L F T K I S R L Q S I K R G R E P P P G - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d P R K K L * P K R G G K N F S K V F I E R R * L I F L P R S G G G - e P G N K * N P N G G G R T S V K * L F K G G E F Y L S P A P V G G R - f A T K E I L T E E G G Q Q F K K C F N G A K L T Y L P P P F G G G - XmnI | GGGCCGTTTGAGGAATCCCCGCCGCGTTTGTCCCCCTCTGGAAGAATCCCTTCGTTGGCCCCTCTTTCTTGTGTTCCCACCA 901 ---------+---------+---------+---------+---------+---------+---------+---------+-- 982 CCCGGCAAACTCCTTAGGGGCGGCGCAAACAGGGGGAGACCTTCTTAGGGAAGCAACCGGGGAGAAAGAACACAAGGGTGGT a G P F E E S P P R L S P S G R I P S L A P L S C V P T - b G R L R N P R R V C P P L E E S L R W P L F L V F P P - c A V * G I P A A F V P L W K N P F V G P S F L C S H - 901 ---------+---------+---------+---------+---------+---------+---------+---------+-- 982 d P A T Q P I G A A N T G R Q F F G K T P G E K K H E W W - e P R K L F G R R T Q G G R S S D R R Q G R K R T N G G - f P G N S S D G G R K D G E P L I G E N A G R E Q T G V - Enzymes that do cut: AlwNI BamHI BglI Bpu1102I BsaXI BsbI BspMI BstXI DrdII EagI EcoNI EcoRI FseI HindIII NgoAIV NsiI PflMI PstI PvuII SmaI VspI XmnI Enzymes that do not cut: AatII AceIII AflII AhdI ApaI ApaBI ApaLI AscI AvrII BbsI Bce83I BcgI BclI BfiI BglII BplI BpmI Bpu10I BsaI BsaBI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrBI BsrDI BsrGI BssHII BssSI Bst1107I BstEII Bsu36I ClaI DraI DraIII DrdI EarI EciI Eco47III Eco57I EcoRV FspI HgiEII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NheI NotI NruI NspV PacI Pfl1108I PinAI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I XbaI XcmI XhoI