(Linear) MAP of: ./Fgr-S_1_A08_T7.seq check: 9621 from: 1 to: 875 Fgr-S_1_A08_T7 875 29 716 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:34 .. BspMI XhoI EagI EcoRV EagI | BglI SphI| NotI BsaBI | EcoRI NotI | SmaI SanDI NsiI ||BsrBI| BstXI | | PstI| BsrBI| | SrfI AlwNI | | || || | | | || || | | | AGGGATTGGAATTGGGGACCCTCTATATGCATGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTTCGAGCGGCCGCCCGGGCAGGTA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 TCCCTAACCTTAACCCCTGGGAGATATACGTACGAGCTCGCCGGCGGTCACACTACCTATAGACGTCTTAAGCCGAAAGCTCGCCGGCGGGCCCGTCCAT a R D W N W G P S I C M L E R P P V * W I S A E F G F R A A A R A G T - b G I G I G D P L Y A C S S G R Q C D G Y L Q N S A F E R P P G Q V - c G L E L G T L Y M H A R A A A S V M D I C R I R L S S G R P G R Y - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d S Q F Q P G E I H M S S R G G T H H I D A S N P K R A A A R A P - e P N S N P V R * I C A R A A A L T I S I Q L I R S E L P R G P L Y - f P I P I P S G R Y A H E L P R W H S P Y R C F E A K S R G G P C T - ClaI MscI EarI| ClaI NheI BglII | || | | | CTGGCCACACATGATGATGTATGGCACTTTTATTTTATAACTCTTCATCGATCAACTAAACGGTGATCGATCTAGCTAGCACATCACAGATCTTAGCAGG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GACCGGTGTGTACTACTACATACCGTGAAAATAAAATATTGAGAAGTAGCTAGTTGATTTGCCACTAGCTAGATCGATCGTGTAGTGTCTAGAATCGTCC a G H T * * C M A L L F Y N S S S I N * T V I D L A S T S Q I L A G - b L A T H D D V W H F Y F I T L H R S T K R * S I * L A H H R S * Q A - c W P H M M M Y G T F I L * L F I D Q L N G D R S S * H I T D L S R - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d V P W V H H H I A S K N * L E E D I L * V T I S R A L V D C I K A P - e Q G C M I I Y P V K I K Y S K M S * S F P S R D L * C M V S R L L - f S A V C S S T H C K * K I V R * R D V L R H D I * S A C * L D * C - BsgI BsgI HgiEII BcgI | DraIII BcgI SspI | | | | | | | | CACCACCAGCACAGGTAGCTGTCATGGGGATGCTGTAGATGGCGGGGGCGATGGTGCTGCACGGGGTGGTGGTGCAATATTGTGGGATGTTTACGCTGCA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GTGGTGGTCGTGTCCATCGACAGTACCCCTACGACATCTACCGCCCCCGCTACCACGACGTGCCCCACCACCACGTTATAACACCCTACAAATGCGACGT a T T S T G S C H G D A V D G G G D G A A R G G G A I L W D V Y A A - b P P A Q V A V M G M L * M A G A M V L H G V V V Q Y C G M F T L H - c H H Q H R * L S W G C C R W R G R W C C T G W W C N I V G C L R C T - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d V V L V P L Q * P S A T S P P P S P A A R P P P A I N H S T * A A - e C W W C L Y S D H P H Q L H R P R H H Q V P H H H L I T P H K R Q - f A G G A C T A T M P I S Y I A P A I T S C P T T T C Y Q P I N V S C - BspMI DrdI Eco57I Bpu10I| Bpu10I | | || | CATCGACGGAAGGGTCTGAAGCACCATCCCCATTATCTCAACCGGAACCTGCTGCTGAGGCTGCCCGAAACTTTGCCCTTGCTGCTGCTGAGGCTGGCCG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GTAGCTGCCTTCCCAGACTTCGTGGTAGGGGTAATAGAGTTGGCCTTGGACGACGACTCCGACGGGCTTTGAAACGGGAACGACGACGACTCCGACCGGC a H R R K G L K H H P H Y L N R N L L L R L P E T L P L L L L R L A E - b I D G R V * S T I P I I S T G T C C * G C P K L C P C C C * G W P - c S T E G S E A P S P L S Q P E P A A E A A R N F A L A A A E A G R - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d C R R F P R F C W G W * R L R F R S S L S G S V K G K S S S L S A - e V D V S P D S A G D G N D * G S G A A S A A R F K A R A A A S A P R - f M S P L T Q L V M G M I E V P V Q Q Q P Q G F S Q G Q Q Q Q P Q G - AlwNI Psp1406I BglII PflMI | | | AAACGTTGCCCTTGCTGCTGCCGCATGATGATCTGTGCCACGCTACAGACCGCCTGGCACCGAGCCTGCTCCGAGATCTGGGCCAGCGGCTGGCAGCACT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 TTTGCAACGGGAACGACGACGGCGTACTACTAGACACGGTGCGATGTCTGGCGGACCGTGGCTCGGACGAGGCTCTAGACCCGGTCGCCGACCGTCGTGA a T L P L L L P H D D L C H A T D R L A P S L L R D L G Q R L A A L - b K R C P C C C R M M I C A T L Q T A W H R A C S E I W A S G W Q H C - c N V A L A A A A * * S V P R Y R P P G T E P A P R S G P A A G S T - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d S V N G K S S G C S S R H W A V S R R A G L R S R S R P W R S A A S - e F T A R A A A A H H D T G R * L G G P V S G A G L D P G A A P L V - f F R Q G Q Q Q R M I I Q A V S C V A Q C R A Q E S I Q A L P Q C C - NdeI BsgI | BspGI | | PstI | | | | GTTGCCGCATCAACTGGCAACCGCTTGCCTGCCACATCTGTGACTGGACATATGCTGTCTGGCTGCACTGCTGCAGGAAAGCAGCGCATGTGTTCATCTG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CAACGGCGTAGTTGACCGTTGGCGAACGGACGGTGTAGACACTGACCTGTATACGACAGACCGACGTGACGACGTCCTTTCGTCGCGTACACAAGTAGAC a L P H Q L A T A C L P H L * L D I C C L A A L L Q E S S A C V H L - b C R I N W Q P L A C H I C D W T Y A V W L H C C R K A A H V F I C - c V A A S T G N R L P A T S V T G H M L S G C T A A G K Q R M C S S A - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d N G C * S A V A Q R G C R H S S M H Q R A A S S C S L L A H T * R - e T A A D V P L R K G A V D T V P C I S D P Q V A A P F C R M H E D - f Q Q R M L Q C G S A Q W M Q S Q V Y A T Q S C Q Q L F A A C T N M Q - FspI BsrDI BsrGI PvuII |Eco47III | | | | | CGGCTGTGGCTGCGGTTGCGGCTGCGGCTGCGGCTGCTGCTGGCATTGCCCGTAGCCCTGGCTACAGGTAGTGTACAGCTGCGCAACAGCGCTTGTCGCC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 GCCGACACCGACGCCAACGCCGACGCCGACGCCGACGACGACCGTAACGGGCATCGGGACCGATGTCCATCACATGTCGACGCGTTGTCGCGAACAGCGG a R L W L R L R L R L R L L L A L P V A L A T G S V Q L R N S A C R R - b G C G C G C G C G C G C C W H C P * P W L Q V V Y S C A T A L V A - c A V A A V A A A A A A A A G I A R S P G Y R * C T A A Q Q R L S P - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d R S H S R N R S R S R S S S A N G T A R A V P L T C S R L L A Q R - e A A T A A T A A A A A A A A P M A R L G P * L Y H V A A C C R K D G - f P Q P Q P Q P Q P Q P Q Q Q C Q G Y G Q S C T T Y L Q A V A S T A - EagI Bpu1102I EcoRI BstXI EagI SpeI BamHI SacI KpnI | | | | | | | | | GACCTCGGCCGCGACCACGCTAAGCCGAATTCCAGCACACTGGCGGCCGTTACTAGTGGATCCGAGCTCGGTACCAGCTTGGCGTAATCATGTCATAGCT 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 CTGGAGCCGGCGCTGGTGCGATTCGGCTTAAGGTCGTGTGACCGCCGGCAATGATCACCTAGGCTCGAGCCATGGTCGAACCGCATTAGTACAGTATCGA a P R P R P R * A E F Q H T G G R Y * W I R A R Y Q L G V I M S * L - b D L G R D H A K P N S S T L A A V T S G S E L G T S L A * S C H S C - c T S A A T T L S R I P A H W R P L L V D P S S V P A W R N H V I A - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d R G R G R G R * A S N W C V P P R * * H I R A R Y W S P T I M D Y S - e V E A A V V S L R I G A C Q R G N S T S G L E T G A Q R L * T M A - f S R P R S W A L G F E L V S A A T V L P D S S P V L K A Y D H * L - BsrBI NspV | | GTTTNCTGTGTGAAATTGTATCCGCTCACAATTCCACCACATTCGAACCGGGAGCCTAAAGTGTAAGCCTGGGGA 801 ---------+---------+---------+---------+---------+---------+---------+----- 875 CAAANGACACACTTTAACATAGGCGAGTGTTAAGGTGGTGTAAGCTTGGCCCTCGGATTTCACATTCGGACCCCT a F ? V * N C I R S Q F H H I R T G S L K C K P G - b ? L C E I V S A H N S T T F E P G A * S V S L G - c V ? C V K L Y P L T I P P H S N R E P K V * A W G - 801 ---------+---------+---------+---------+---------+---------+---------+----- 875 d N ? T H F Q I R E C N W W M R V P L R F H L G P S - e T ? Q T F N Y G S V I G G C E F R S G L T Y A Q P - f Q K ? H S I T D A * L E V V N S G P A * L T L R P - Enzymes that do cut: AlwNI BamHI BcgI BglI BglII Bpu10I Bpu1102I BsaBI BsgI BspGI BspMI BsrBI BsrDI BsrGI BstXI ClaI DraIII DrdI EagI EarI Eco47III Eco57I EcoRI EcoRV FspI HgiEII KpnI MscI NdeI NheI NotI NsiI NspV PflMI Psp1406I PstI PvuII SacI SanDI SmaI SpeI SphI SrfI SspI XhoI Enzymes that do not cut: AatII AceIII AflII AhdI ApaI ApaBI ApaLI AscI AvrII BbsI Bce83I BclI BfiI BplI BpmI BsaI BsaXI BsbI BseRI BsiWI BsmI BsmBI BspEI BspLU11I BssHII BssSI Bst1107I BstEII Bsu36I DraI DrdII EciI EcoNI FseI HindIII HpaI MfeI MluI NarI NcoI NgoAIV NruI PacI Pfl1108I PinAI PmeI PmlI PshAI PvuI RcaI RsrII SacII SalI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI Sse8387I Sse8647I StuI SwaI Tth111I VspI XbaI XcmI XmnI