(Linear) MAP of: ./Fgr-S_1_B01_T7.seq check: 7725 from: 1 to: 872 Fgr-S_1_B01_T7 872 25 603 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:34 .. EagI BspMI NotI EagI | BglI BsrBI| EcoRV EcoRI NotI | SmaI ApaI XhoI || BsaBI | PstI| BsrBI| | SrfI | | || | | || || | | AGGATTGATTGGGCCCTCTATATGCTGCTCGAGCGGCCGCCGTGTGATGGATATCTGCAGAATTCGGCTTTCGAGCGGCCGCCCGGGCAGGTGCGCCTTC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 TCCTAACTAACCCGGGAGATATACGACGAGCTCGCCGGCGGCACACTACCTATAGACGTCTTAAGCCGAAAGCTCGCCGGCGGGCCCGTCCACGCGGAAG a R I D W A L Y M L L E R P P C D G Y L Q N S A F E R P P G Q V R L R - b G L I G P S I C C S S G R R V M D I C R I R L S S G R P G R C A F - c D * L G P L Y A A R A A A V * W I S A E F G F R A A A R A G A P S - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I S Q A R * I S S S R G G H S P Y R C F E A K S R G G P C T R R - e S Q N P G R Y A A R A A A T H H I D A S N P K R A A A R A P A G E - f P N I P G E I H Q E L P R R T I S I Q L I R S E L P R G P L H A K - Bpu1102I BseRI BssSI | SexAI BclI | | | | | GGGCACGGGGCACAGAAACGGAGGAGCAAATCCAAAAGCGACTAAGAAATGCTCGTGCTGAGCTTGACCAGTCCAATTCACCAGGTCTTTTTGATCATCT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CCCGTGCCCCGTGTCTTTGCCTCCTCGTTTAGGTTTTCGCTGATTCTTTACGAGCACGACTCGAACTGGTCAGGTTAAGTGGTCCAGAAAAACTAGTAGA a A R G T E T E E Q I Q K R L R N A R A E L D Q S N S P G L F D H L - b G H G A Q K R R S K S K S D * E M L V L S L T S P I H Q V F L I I F - c G T G H R N G G A N P K A T K K C S C * A * P V Q F T R S F * S S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d R A R P V S V S S C I W F R S L F A R A S S S W D L E G P R K S * R - e P V P C L F P P A F G F A V L F H E H Q A Q G T W N V L D K Q D D - f P C P A C F R L L L D L L S * S I S T S L K V L G I * W T K K I M - SphI | TTTGGTAAATGATAACCTTGAAGCATGCTATGAGAATTTGAAGAAGATGCTTTCGTTGGATGATGACCACAAAGATTCAGATGGTTGTTTCATCGAGGAT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AAACCATTTACTATTGGAACTTCGTACGATACTCTTAAACTTCTTCTACGAAAGCAACCTACTACTGGTGTTTCTAAGTCTACCAACAAAGTAGCTCCTA a L V N D N L E A C Y E N L K K M L S L D D D H K D S D G C F I E D - b W * M I T L K H A M R I * R R C F R W M M T T K I Q M V V S S R M - c F G K * * P * S M L * E F E E D A F V G * * P Q R F R W L F H R G W - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d K T F S L R S A H * S F K F F I S E N S S S W L S E S P Q K M S S - e K P L H Y G Q L M S H S N S S S A K T P H H G C L N L H N N * R P - f K Q Y I I V K F C A I L I Q L L H K R Q I I V V F I * I T T E D L I - AceIII HindIII NheI | | | GGGAAAGCAACCGCATGTTATTCTATCCTGTCCAAAACAGAGTCAGAAGTTTTTTTGCAGTCTGAAACTGGCGAAGTAGTAAAAGGAGCTGCAAGCTTGC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CCCTTTCGTTGGCGTACAATAAGATAGGACAGGTTTTGTCTCAGTCTTCAAAAAAACGTCAGACTTTGACCGCTTCATCATTTTCCTCGACGTTCGAACG a G K A T A C Y S I L S K T E S E V F L Q S E T G E V V K G A A S L L - b G K Q P H V I L S C P K Q S Q K F F C S L K L A K * * K E L Q A C - c E S N R M L F Y P V Q N R V R S F F A V * N W R S S K R S C K L A - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d P F A V A H * E I R D L V S D S T K K C D S V P S T T F P A A L K - e H S L L R M N N * G T W F L T L L K K A T Q F Q R L L L L L Q L S A - f P F C G C T I R D Q G F C L * F N K Q L R F S A F Y Y F S S C A Q - SalI BspGI AflII MfeI | | | | TAGCGGTCGACTTATCCTCTCTCACAGGTGGCGCTCCTGGACGAACAAGAGGTCTTAAGATACACTCAATTAACTCAATTGACAACGATCTGAAGGGCAT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 ATCGCCAGCTGAATAGGAGAGAGTGTCCACCGCGAGGACCTGCTTGTTCTCCAGAATTCTATGTGAGTTAATTGAGTTAACTGTTGCTAGACTTCCCGTA a A V D L S S L T G G A P G R T R G L K I H S I N S I D N D L K G I - b * R S T Y P L S Q V A L L D E Q E V L R Y T Q L T Q L T T I * R A L - c S G R L I L S H R W R S W T N K R S * D T L N * L N * Q R S E G H - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d S A T S K D E R V P P A G P R V L P R L I C E I L E I S L S R F P M - e L P R S I R E * L H R E Q V F L L D * S V S L * S L Q C R D S P C - f * R D V * G R E C T A S R S S C S T K L Y V * N V * N V V I Q L A - Eco57I BsbI Eco57I | | | TAGATAACCCAAAACATTCTTACAAACGATGTCGCAGAAGTGTTGACTGATGGATTTTGGATCAATTAGTGAGATATAACAGCTTCAGAAACATATTAGT 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 ATCTATTGGGTTTTGTAAGAATGTTTGCTACAGCGTCTTCACAACTGACTACCTAAAACCTAGTTAATCACTCTATATTGTCGAAGTCTTTGTATAATCA a R * P K T F L Q T M S Q K C * L M D F G S I S E I * Q L Q K H I S - b D N P K H S Y K R C R R S V D * W I L D Q L V R Y N S F R N I L V - c * I T Q N I L T N D V A E V L T D G F W I N * * D I T A S E T Y * L - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d L Y G L V N K C V I D C F H Q S I S K P D I L S I Y C S * F C I L - e * I V W F M R V F S T A S T N V S P N Q I L * H S I V A E S V Y * - f N S L G F C E * L R H R L L T S Q H I K S * N T L Y L L K L F M N T - BglI | TAGAGAAAAAGGACAACATAAGTGGGATTTATTGCCATTTATCATTTGTTCGCCGGAGAGGCGCTTCGTTTGTTCTTTGTACCAGAATGAGGGTGAAGTC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 ATCTCTTTTTCCTGTTGTATTCACCCTAAATAACGGTAAATAGTAAACAAGCGGCCTCTCCGCGAAGCAAACAAGAAACATGGTCTTACTCCCACTTCAG a * R K R T T * V G F I A I Y H L F A G E A L R L F F V P E * G * S H - b R E K G Q H K W D L L P F I I C S P E R R F V C S L Y Q N E G E V - c E K K D N I S G I Y C H L S F V R R R G A S F V L C T R M R V K S - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d * L F L V V Y T P N I A M * * K N A P S A S R K N K T G S H P H L - e N S F F S L M L P I * Q W K D N T R R L P A E N T R Q V L I L T F D - f L S F P C C L H S K N G N I M Q E G S L R K T Q E K Y W F S P S T - BspEI EagI Bpu1102I BstXI EagI BamHI SacI | | | | | | ATGCCAGAAGGGATTGTACCTCGGCCGCGACCACGCTAAGCCCGAATCCAGCACACTGGCGGCCGTTACTAGNGGGATCCGAGCTCCGGACCCAAGCTGG 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 TACGGTCTTCCCTAACATGGAGCCGGCGCTGGTGCGATTCGGGCTTAGGTCGTGTGACCGCCGGCAATGATCNCCCTAGGCTCGAGGCCTGGGTTCGACC a A R R D C T S A A T T L S P N P A H W R P L L ? G S E L R T Q A G - b M P E G I V P R P R P R * A R I Q H T G G R Y * ? D P S S G P K L G - c C Q K G L Y L G R D H A K P E S S T L A A V T ? G I R A P D P S W - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d * A L L S Q V E A A V V S L G F G A C Q R G N S ? P D S S R V W A P - e H W F P N Y R P R S W A L G S D L V S A A T V L P I R A G S G L Q - f M G S P I T G R G R G R * A R I W C V P P R * * ? S G L E P G L S - BsrBI | GCGTATTCATGGTCATAGCTTGTTCCCTGTGTGAAATTGGTATTCCGCTCACAATTCCACACAACTTCGAGA 801 ---------+---------+---------+---------+---------+---------+---------+-- 872 CGCATAAGTACCAGTATCGAACAAGGGACACACTTTAACCATAAGGCGAGTGTTAAGGTGTGTTGAAGCTCT a R I H G H S L F P V * N W Y S A H N S T Q L R - b V F M V I A C S L C E I G I P L T I P H N F E - c A Y S W S * L V P C V K L V F R S Q F H T T S R - 801 ---------+---------+---------+---------+---------+---------+---------+-- 872 d R I * P * L K N G T H F Q Y E A * L E V C S R S - e A Y E H D Y S T G Q T F N T N R E C N W V V E L - f P T N M T M A Q E R H S I P I G S V I G C L K S - Enzymes that do cut: AceIII AflII ApaI BamHI BclI BglI Bpu1102I BsaBI BsbI BseRI BspEI BspGI BspMI BsrBI BssSI BstXI EagI Eco57I EcoRI EcoRV HindIII MfeI NheI NotI PstI SacI SalI SexAI SmaI SphI SrfI XhoI Enzymes that do not cut: AatII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI Bce83I BcgI BfiI BglII BplI BpmI Bpu10I BsaI BsaXI BsgI BsiWI BsmI BsmBI BspLU11I BsrDI BsrGI BssHII Bst1107I BstEII Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III EcoNI FseI FspI HgiEII HpaI KpnI MluI MscI NarI NcoI NdeI NgoAIV NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SacII SanDI SapI ScaI SfiI SgfI SgrAI SnaBI SpeI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XmnI