(Linear) MAP of: ./Fgr-S_1_B07_T7.seq check: 1865 from: 1 to: 866 Fgr-S_1_B07_T7 866 27 698 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:34 .. EagI NotI EcoRV BsrBI| BsaBI | EcoRI ApaI XhoI || BstXI | | PstI|Bpu1102I EagI KpnI | | || | | | || | | | NGCTATTCGATTGGGCCCTCTATATGCTGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAGCGTGGTCGCGGCCGAGGTACCATCA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 NCGATAAGCTAACCCGGGAGATATACGACGAGCTCGCCGGCGGTCACACTACCTATAGACGTCTTAAGCCGAATCGCACCAGCGCCGGCTCCATGGTAGT a ? Y S I G P S I C C S S G R Q C D G Y L Q N S A * R G R G R G T I N - b A I R L G P L Y A A R A A A S V M D I C R I R L S V V A A E V P S - c L F D W A L Y M L L E R P P V * W I S A E F G L A W S R P R Y H Q - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d * E I P G E I H Q E L P R W H S P Y R C F E A * R P R P R P V M - e S N S Q A R * I S S S R G G T H H I D A S N P K A H D R G L Y W * - f A I R N P G R Y A A R A A A L T I S I Q L I R S L T T A A S T G D - DraI BsaBI BpmI EcoRI | | | | ATTTAAACCTCACTGATAAAAATCAAGATACAAAGTACATCAACAGACAAAGCCTCTCCAGGAATTCAGACAAAGCGGAGAACAGATCAGGACAGCGCAT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TAAATTTGGAGTGACTATTTTTAGTTCTATGTTTCATGTAGTTGTCTGTTTCGGAGAGGTCCTTAAGTCTGTTTCGCCTCTTGTCTAGTCCTGTCGCGTA a L N L T D K N Q D T K Y I N R Q S L S R N S D K A E N R S G Q R M - b I * T S L I K I K I Q S T S T D K A S P G I Q T K R R T D Q D S A C - c F K P H * * K S R Y K V H Q Q T K P L Q E F R Q S G E Q I R T A H - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d L K F R V S L F * S V F Y M L L C L R E L F E S L A S F L D P C R M - e N L G * Q Y F D L Y L T C * C V F G R W S N L C L P S C I L V A C - f I * V E S I F I L I C L V D V S L A E G P I * V F R L V S * S L A - SphI BpmI | | GCCACAATCAGCTAGTCCAACGTCAATCCATGTTCTGACTAGATGATGCGAACAATGTCGTCCCTTGTCATTATCCTGTTTGCATCTTGCATCCTCTCCA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CGGTGTTAGTCGATCAGGTTGCAGTTAGGTACAAGACTGATCTACTACGCTTGTTACAGCAGGGAACAGTAATAGGACAAACGTAGAACGTAGGAGAGGT a P Q S A S P T S I H V L T R * C E Q C R P L S L S C L H L A S S P - b H N Q L V Q R Q S M F * L D D A N N V V P C H Y P V C I L H P L Q - c A T I S * S N V N P C S D * M M R T M S S L V I I L F A S C I L S R - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d G C D A L G V D I W T R V L H H S C H R G K D N D Q K C R A D E G - e A V I L * D L T L G H E S * I I R V I D D R T M I R N A D Q M R E - f H W L * S T W R * D M N Q S S S A F L T T G Q * * G T Q M K C G R W - ApaBI PvuII| BclI || | GGATGAACTCTACTTGGCCTCTAGTGTAAGCAACAGCTGCATCTCTGTTGACTGTTTGCTCAACTTCATCAATGGACATTTGATCAACATGGTTTGCCAG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CCTACTTGAGATGAACCGGAGATCACATTCGTTGTCGACGTAGAGACAACTGACAAACGAGTTGAAGTAGTTACCTGTAAACTAGTTGTACCAAACGGTC a G * T L L G L * C K Q Q L H L C * L F A Q L H Q W T F D Q H G L P A - b D E L Y L A S S V S N S C I S V D C L L N F I N G H L I N M V C Q - c M N S T W P L V * A T A A S L L T V C S T S S M D I * S T W F A S - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d P H V R S P R * H L C C S C R Q Q S N A * S * * H V N S * C P K G - e L I F E V Q G R T Y A V A A D R N V T Q E V E D I S M Q D V H N A L - f S S S * K A E L T L L L Q M E T S Q K S L K M L P C K I L M T Q W - Bpu10I NsiI | BclI BsrDI | | | | | | CACATGCTGTCCAAGAATTGCCTCAAATGCTTCCATTCTCTGTGAAGAAACATCCTGATCATTTGATGCATTGCCTGAGCCTCCATCCACATCCATTGGG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GTGTACGACAGGTTCTTAACGGAGTTTACGAAGGTAAGAGACACTTCTTTGTAGGACTAGTAAACTACGTAACGGACTCGGAGGTAGGTGTAGGTAACCC a H A V Q E L P Q M L P F S V K K H P D H L M H C L S L H P H P L G - b H M L S K N C L K C F H S L * R N I L I I * C I A * A S I H I H W V - c T C C P R I A S N A S I L C E E T S * S F D A L P E P P S T S I G - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d A C A T W S N G * I S G N E T F F C G S * K I C Q R L R W G C G N P - e V H Q G L I A E F A E M R Q S S V D Q D N S A N G S G G D V D M P - f C M S D L F Q R L H K W E R H L F M R I M Q H M A Q A E M W M W Q - EagI NotI BglI| BspMI|| SmaI ||| BsrDI SrfI |||BsrBI EcoRI BstXI EagI | | ||| | | | | TCGTTGCCAGAGCTTCCATGCACATCTGCATTGCCACCGCTTGCACCTCCACCTGCCCGGGCGGCCGCTCGAAAGCCGAATTCCAGCACACTGGCGGCCG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 AGCAACGGTCTCGAAGGTACGTGTAGACGTAACGGTGGCGAACGTGGAGGTGGACGGGCCCGCCGGCGAGCTTTCGGCTTAAGGTCGTGTGACCGCCGGC a R C Q S F H A H L H C H R L H L H L P G R P L E S R I P A H W R P - b V A R A S M H I C I A T A C T S T C P G G R S K A E F Q H T G G R - c S L P E L P C T S A L P P L A P P P A R A A A R K P N S S T L A A V - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d R Q W L K W A C R C Q W R K C R W R G P R G S S L R I G A C Q R G - e D N G S S G H V D A N G G S A G G G A R A A A R F G F E L V S A A - f T T A L A E M C M Q M A V A Q V E V Q G P P R E F A S N W C V P P R - HindIII SpeI BamHI SacI KpnI | BsrBI | | | | | | TTACTAGTGGATCCGAGCTCGGTACCAAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATAC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 AATGATCACCTAGGCTCGAGCCATGGTTCGAACCGCATTAGTACCAGTATCGACAAAGGACACACTTTAACAATAGGCGAGTGTTAAGGTGTGTTGTATG a L L V D P S S V P S L A * S W S * L F P V * N C Y P L T I P H N I R - b Y * W I R A R Y Q A W R N H G H S C F L C E I V I R S Q F H T T Y - c T S G S E L G T K L G V I M V I A V S C V K L L S A H N S T Q H T - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d N S T S G L E T G L K A Y D H D Y S N G T H F Q * G S V I G C L M - e T V L P D S S P V L S P T I M T M A T E Q T F N N D A * L E V C C V - f * * H I R A R Y W A Q R L * P * L Q K R H S I T I R E C N W V V Y - VspI | GAGCCGGAAGCATAAAGTGTAAAGCCTGGGGGTGCCTATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTNTCCAGTCGGGAAACCT 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 CTCGGCCTTCGTATTTCACATTTCGGACCCCCACGGATACTCACTCGATTGAGTGTAATTAACGCAACGCGAGTGACGGGCGANAGGTCAGCCCTTTGGA a A G S I K C K A W G C L * V S * L T L I A L R S L P A ? Q S G N L - b E P E A * S V K P G G A Y E * A N S H * L R C A H C P L S S R E T C - c S R K H K V * S L G V P M S E L T H I N C V A L T A R ? P V G K P - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d R A P L M F H L A Q P H R H T L * S V N I A N R E S G A ? W D P F R - e L R F C L T Y L R P T G I L S S V * M L Q T A S V A R ? G T P F G - f S G S A Y L T F G P P A * S H A L E C * N R Q A * Q G S ? L R S V - PvuII VspI | | GTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAAGCNGNTTTGCGTATTGGGCGCT 801 ---------+---------+---------+---------+---------+---------+------ 866 CAGCACGGTCGACGTAATTACTTAGCCGGTTGCGCGCCCCTCTTCGNCNAAACGCATAACCCGCGA a S C Q L H * * I G Q R A G R S ? F A Y W A - b R A S C I N E S A N A R G E A ? L R I G R - c V V P A A L M N R P T R G E K ? ? C V L G A - 801 ---------+---------+---------+---------+---------+---------+------ 866 d D H W S C * H I P W R A P L L ? ? A Y Q A S - e T T G A A N I F R G V R P S F ? ? Q T N P A - f Q R A L Q M L S D A L A R P S A ? K R I P R - Enzymes that do cut: ApaI ApaBI BamHI BclI BglI BpmI Bpu10I Bpu1102I BsaBI BspMI BsrBI BsrDI BstXI DraI EagI EcoRI EcoRV HindIII KpnI NotI NsiI PstI PvuII SacI SmaI SpeI SphI SrfI VspI XhoI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaLI AscI AvrII BbsI Bce83I BcgI BfiI BglII BplI BsaI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrGI BssHII BssSI Bst1107I BstEII Bsu36I ClaI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI FseI FspI HgiEII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI Sse8387I Sse8647I SspI StuI SwaI Tth111I XbaI XcmI XmnI