(Linear) MAP of: ./Fgr-S_1_C01_T7.seq check: 4261 from: 1 to: 904 Fgr-S_1_C01_T7 904 28 590 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:34 .. EagI NotI EcoRV BsrBI| BsaBI | EcoRI SanDI XhoI || BstXI | | PstI|Bpu1102I EagI | | || | | | || | | AGGATTTGAATTGGGACCCTCTANATGCTGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAGCGTGGTCGCGGCCGAGGTACTATA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 TCCTAAACTTAACCCTGGGAGATNTACGACGAGCTCGCCGGCGGTCACACTACCTATAGACGTCTTAAGCCGAATCGCACCAGCGCCGGCTCCATGATAT a R I * I G T L ? M L L E R P P V * W I S A E F G L A W S R P R Y Y K - b G F E L G P S ? C C S S G R Q C D G Y L Q N S A * R G R G R G T I - c D L N W D P L ? A A R A A A S V M D I C R I R L S V V A A E V L * - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d S K F Q S G R ? A A R A A A L T I S I Q L I R S L T T A A S T S Y - e P N S N P G E ? H Q E L P R W H S P Y R C F E A * R P R P R P V I - f I Q I P V R * ? S S S R G G T H H I D A S N P K A H D R G L Y * - PinAI DraI | | AAAACCTCTATTATGAAGATAGAAACCAACCTGGCTCACACCGGTCTTAACTCAAATCATGTAAGAATTTAAAGGTCGAACAGACCTATAATCTAATTTT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TTTTGGAGATAATACTTCTATCTTTGGTTGGACCGAGTGTGGCCAGAATTGAGTTTAGTACATTCTTAAATTTCCAGCTTGTCTGGATATTAGATTAAAA a N L Y Y E D R N Q P G S H R S * L K S C K N L K V E Q T Y N L I F - b K T S I M K I E T N L A H T G L N S N H V R I * R S N R P I I * F S - c K P L L * R * K P T W L T P V L T Q I M * E F K G R T D L * S N F - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d F G R N H L Y F G V Q S V G T K V * I M Y S N L P R V S R Y D L K - e F V E I I F I S V L R A * V P R L E F * T L I * L D F L G I I * N - f L F R * * S S L F W G P E C R D * S L D H L F K F T S C V * L R I K - Bsu36I | CTTCTATTAGATGTTTTCTTAATTCAACATCGAGGTAGCATTTAATCTTCTTGATTTGATCTCTAAAAAATTTTTGCTCTGTTATCCCTAAGGTAACTTT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GAAGATAATCTACAAAAGAATTAAGTTGTAGCTCCATCGTAAATTAGAAGAACTAAACTAGAGATTTTTTAAAAACGAGACAATAGGGATTCCATTGAAA a F Y * M F S * F N I E V A F N L L D L I S K K F L L C Y P * G N F - b S I R C F L N S T S R * H L I F L I * S L K N F C S V I P K V T F - c L L L D V F L I Q H R G S I * S S * F D L * K I F A L L S L R * L F - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d R R N S T K K I * C R P L M * D E Q N S R * F I K A R N D R L Y S - e E E I L H K R L E V D L Y C K I K K I Q D R F F K Q E T I G L T V K - f K * * I N E * N L M S T A N L R R S K I E L F N K S Q * G * P L K - BfiI DraI | | TTTTTCTTAAAAGGTTTATTATTCTTTTAATAGTAATTTTAATAAAAAATTTTTATTTTTTTACTTCCCCAGTAAAATTTTTACCTTTTAATTTTTAAAT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 AAAAAGAATTTTCCAAATAATAAGAAAATTATCATTAAAATTATTTTTTAAAAATAAAAAAATGAAGGGGTCATTTTAAAAATGGAAAATTAAAAATTTA a F F L K G L L F F * * * F * * K I F I F L L P Q * N F Y L L I F K F - b F S * K V Y Y S F N S N F N K K F L F F Y F P S K I F T F * F L N - c F L K R F I I L L I V I L I K N F Y F F T S P V K F L P F N F * I - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d K K R L L N I I R K I T I K I F F K * K K V E G T F N K G K L K * I - e K E * F T * * E K L L L K L L F N K N K * K G L L I K V K * N K F - f K K K F P K N N K * Y Y N * Y F I K I K K S G W Y F K * R K I K L - EagI NotI BglI| BspMI|| SmaI ||| SrfI |||BsrBI EcoRI BstXI | ||| | | | TTATAATTAAGTTCTATAGGGTCTTATCGTCTTTCATAATTATTTTAGCCTTTTAACACCTGCCCGGGCGGCCGCTCGAAAGCCGAATTCCAGCACACTG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AATATTAATTCAAGATATCCCAGAATAGCAGAAAGTATTAATAAAATCGGAAAATTGTGGACGGGCCCGCCGGCGAGCTTTCGGCTTAAGGTCGTGTGAC a I I K F Y R V L S S F I I I L A F * H L P G R P L E S R I P A H W - b L * L S S I G S Y R L S * L F * P F N T C P G G R S K A E F Q H T G - c Y N * V L * G L I V F H N Y F S L L T P A R A A A R K P N S S T L - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d * L * T R Y P R I T K * L * K L R K V G A R A A A R F G F E L V S - e K Y N L E I P D * R R E Y N N * G K L V Q G P P R E F A S N W C V - f N I I L N * L T K D D K M I I K A K * C R G P R G S S L R I G A C Q - HindIII EagI SpeI BamHI SacI KpnI | BsrBI | | | | | | | GCGGCCGTTACTAGTGGATCCGAGCTCGGTACCAAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACAC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CGCCGGCAATGATCACCTAGGCTCGAGCCATGGTTCGAACCGCATTAGTACCAGTATCGACAAAGGACACACTTTAACAATAGGCGAGTGTTAAGGTGTG a R P L L V D P S S V P S L A * S W S * L F P V * N C Y P L T I P H - b G R Y * W I R A R Y Q A W R N H G H S C F L C E I V I R S Q F H T - c A A V T S G S E L G T K L G V I M V I A V S C V K L L S A H N S T Q - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d A A T V L P D S S P V L S P T I M T M A T E Q T F N N D A * L E V - e P P R * * H I R A R Y W A Q R L * P * L Q K R H S I T I R E C N W V - f R G N S T S G L E T G L K A Y D H D Y S N G T H F Q * G S V I G C - VspI | AACATACGAGCCGGAAGCATACAGTGTAAAGGCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTGGCGCTCACTGCCCGCTTTCCAGTCGG 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 TTGTATGCTCGGCCTTCGTATGTCACATTTCCGACCCCACGGATTACTCACTCGATTGAGTGTAATTAACGCACCGCGAGTGACGGGCGAAAGGTCAGCC a N I R A G S I Q C K G W G A * * V S * L T L I A W R S L P A F Q S G - b T Y E P E A Y S V K A G V P N E * A N S H * L R G A H C P L S S R - c H T S R K H T V * R L G C L M S E L T H I N C V A L T A R F P V G - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d C C V L R F C V T Y L S P H R I L S S V * M L Q T A S V A R K G T P - e V Y S G S A Y L T F A P T G L S H A L E C * N R P A * Q G S E L R - f L M R A P L M C H L P Q P A * H T L * S V N I A H R E S G A K W D - PvuII BspMI | SmaI | | | GAAACCTGCCGTGCCAGCTGGCATAAATAAATCGGGCAACCGCCCGGGGAGAAGGCGGTTGGCGTATTGGGCGCTTCTTCCGCTGCCTTGGTACATGAAC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 CTTTGGACGGCACGGTCGACCGTATTTATTTAGCCCGTTGGCGGGCCCCTCTTCCGCCAACCGCATAACCCGCGAAGAAGGCGACGGAACCATGTACTTG a N L P C Q L A * I N R A T A R G E G G W R I G R F F R C L G T * T - b E T C R A S W H K * I G Q P P G E K A V G V L G A S S A A L V H E L - c K P A V P A G I N K S G N R P G R R R L A Y W A L L P L P W Y M N - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d F G A T G A P M F L D P L R G P L L R N A Y Q A S R G S G Q Y M F - e S V Q R A L Q C L Y I P C G G P S F A T P T N P A E E A A K T C S - f P F R G H W S A Y I F R A V A R P S P P Q R I P R K K R Q R P V H V - NgoAIV BglI AceIII | | | TTGCTTGCCTCGGGTCGTTTCGGCTGCCGGCGAGGCCGGTTCCAGCTCCACTCAAAAGGCGGGTAATTCCGGTGTTTCCCCACAGAAAAAGGGGGAATAA 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 AACGAACGGAGCCCAGCAAAGCCGACGGCCGCTCCGGCCAAGGTCGAGGTGAGTTTTCCGCCCATTAAGGCCACAAAGGGGTGTCTTTTTCCCCCTTATT a C L P R V V S A A G E A G S S S T Q K A G N S G V S P Q K K G E * - b A C L G S F R L P A R P V P A P L K R R V I P V F P H R K R G N N - c L L A S G R F G C R R G R F Q L H S K G G * F R C F P T E K G G I T - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d K S A E P R K P Q R R P R N W S W E F P P Y N R H K G V S F P P I - e S A Q R P D N R S G A L G T G A G S L L R T I G T N G W L F L P F L - f Q K G R T T E A A P S A P E L E V * F A P L E P T E G C F F P S Y - CCCG 901 ---- 904 GGGC a P - b P - c - 901 ---- 904 d V R - e G - f G - Enzymes that do cut: AceIII BamHI BfiI BglI Bpu1102I BsaBI BspMI BsrBI BstXI Bsu36I DraI EagI EcoRI EcoRV HindIII KpnI NgoAIV NotI PinAI PstI PvuII SacI SanDI SmaI SpeI SrfI VspI XhoI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BbsI Bce83I BcgI BclI BglII BplI BpmI Bpu10I BsaI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII BssSI Bst1107I BstEII ClaI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI FseI FspI HgiEII HpaI MfeI MluI MscI NarI NcoI NdeI NheI NruI NsiI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SacII SalI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I XbaI XcmI XmnI