(Linear) MAP of: ./Fgr-S_3_G01_T7.seq check: 642 from: 1 to: 885 Fgr-S_3_G01_T7 885 35 450 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:35 .. EagI EcoRV XhoI NotI BsaBI | EcoRI ApaI SphI|BsrBI| BstXI | | PstI|Bpu1102I EagI | || || | | | || | | GGACGGGATTGGGCCCTCTANAGCATGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAGCGTGGTCGCGGCCGAGGTTTTTTTTTT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCTGCCCTAACCCGGGAGATNTCGTACGAGCTCGCCGGCGGTCACACTACCTATAGACGTCTTAAGCCGAATCGCACCAGCGCCGGCTCCAAAAAAAAAA a G R D W A L ? S M L E R P P V * W I S A E F G L A W S R P R F F F F - b D G I G P S ? A C S S G R Q C D G Y L Q N S A * R G R G R G F F F - c T G L G P L ? H A R A A A S V M D I C R I R L S V V A A E V F F F - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d S P I P G E ? A H E L P R W H S P Y R C F E A * R P R P R P K K K - e R S Q A R * L M S S R G G T H H I D A S N P K A H D R G L N K K - f V P N P G R ? C A R A A A L T I S I Q L I R S L T T A A S T K K K - HpaI | TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAAATATGCAAGTGCCCCATTTTTATTTGACATTACGGAGTGCATTACATGGGTTAACTGAACTGAG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGTTTATACGTTCACGGGGTAAAAATAAACTGTAATGCCTCACGTAATGTACCCAATTGACTTGACTC a F F F F F F F F F F P N M Q V P H F Y L T L R S A L H G L T E L S - b F F F F F F F F F F S Q I C K C P I F I * H Y G V H Y M G * L N * V - c F F F F F F F F F F P K Y A S A P F L F D I T E C I T W V N * T E - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d K K K K K K K K K K E W I H L H G M K I Q C * P T C * M P * S F Q - e K K K K K K K K K K K G F I C T G W K * K V N R L A N C P N V S S L - f K K K K K K K K K K G L Y A L A G N K N S M V S H M V H T L Q V S - TCGCTTATAAAAAAGGCGAAGGTAAACAAAACCCCCACTCACACAACAAATAAAACCATTTTTTTATTCTTCATAGGCAATCACTGTTACGACTCCATAA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AGCGAATATTTTTTCCGCTTCCATTTGTTTTGGGGGTGAGTGTGTTGTTTATTTTGGTAAAAAAATAAGAAGTATCCGTTAGTGACAATGCTGAGGTATT a R L * K R R R * T K P P L T Q Q I K P F F Y S S * A I T V T T P * - b A Y K K G E G K Q N P H S H N K * N H F F I L H R Q S L L R L H N - c S L I K K A K V N K T P T H T T N K T I F L F F I G N H C Y D S I I - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d T A * L F P S P L C F G W E C L L Y F W K K I R * L C D S N R S W L - e R K Y F L R L Y V F G G S V C C I F G N K * E E Y A I V T V V G Y - f D S I F F A F T F L V G V * V V F L V M K K N K M P L * Q * S E M - BsbI SmaI XcmI MscI | SrfI | | | | TAAACGATGAACCTTTTTTTTCAGGGGGTCAATAAATCTTTTCCCTTGACGGAAATGTTCAAAAAGCCCAGCCACAAAATCCTTGGCCAACACCTGCCCG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 ATTTGCTACTTGGAAAAAAAAGTCCCCCAGTTATTTAGAAAAGGGAACTGCCTTTACAAGTTTTTCGGGTCGGTGTTTTAGGAACCGGTTGTGGACGGGC a * T M N L F F Q G V N K S F P L T E M F K K P S H K I L G Q H L P G - b K R * T F F F R G S I N L F P * R K C S K S P A T K S L A N T C P - c N D E P F F S G G Q * I F S L D G N V Q K A Q P Q N P W P T P A R - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d L R H V K K K L P D I F R K G Q R F H E F L G A V F D K A L V Q G - e Y V I F R K K * P T L L D K G K V S I N L F G L W L I R P W C R G - f I F S S G K K E P P * Y I K E R S P F T * F A W G C F G Q G V G A R - EagI BglI| HindIII BspMI|| EcoRI BstXI EagI BamHI SacI KpnI | ||| | | | | | | | GGCGGCCGTTCAAAAGCCGAATTCCAGCACACTGGCGGCCGTTACTAGGGGATCCGAGCTCGGTACCAAGCTTGGCGTAATCATGGTCATAGCTGTTTCC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CCGCCGGCAAGTTTTCGGCTTAAGGTCGTGTGACCGCCGGCAATGATCCCCTAGGCTCGAGCCATGGTTCGAACCGCATTAGTACCAGTATCGACAAAGG a R P F K S R I P A H W R P L L G D P S S V P S L A * S W S * L F P - b G G R S K A E F Q H T G G R Y * G I R A R Y Q A W R N H G H S C F L - c A A V Q K P N S S T L A A V T R G S E L G T K L G V I M V I A V S - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d P P R E F A S N W C V P P R * * P I R A R Y W A Q R L * P * L Q K - e P R G N L L R I G A C Q R G N S P S G L E T G L K A Y D H D Y S N G - f A A T * F G F E L V S A A T V L P D S S P V L S P T I M T M A T E - BglI VspI | | TGTGTGAAATTGTTATCCCCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGGGCCTAATGAGTGAGCTAACTCACATTA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 ACACACTTTAACAATAGGGGAGTGTTAAGGTGTGTTGTATGCTCGGCCTTCGTATTTCACATTTCGGACCCCCCGGATTACTCACTCGATTGAGTGTAAT a V * N C Y P L T I P H N I R A G S I K C K A W G A * * V S * L T L - b C E I V I P S Q F H T T Y E P E A * S V K P G G P N E * A N S H * - c C V K L L S P H N S T Q H T S R K H K V * S L G G L M S E L T H I N - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d R H S I T I G E C N W V V Y S G S A Y L T F G P P G L S H A L E C * - e T H F Q * G R V I G C L M R A P L M F H L A Q P A * H T L * S V N - f Q T F N N D G * L E V C C V L R F C L T Y L R P P R I L S S V * M - SmaI | ATTGCGTTGCGCTCACTGCCCGCTTTCCATTGGGGAAACTTTTGTGCCCCCTGCTTTAATGAATCGGCCAACCCCCGGGGAAAGGGGGGTTTGGGTATTG 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 TAACGCAACGCGAGTGACGGGCGAAAGGTAACCCCTTTGAAAACACGGGGGACGAAATTACTTAGCCGGTTGGGGGCCCCTTTCCCCCCAAACCCATAAC a I A L R S L P A F H W G N F C A P C F N E S A N P R G K G G L G I G - b L R C A H C P L S I G E T F V P P A L M N R P T P G E R G V W V L - c C V A L T A R F P L G K L L C P L L * * I G Q P P G K G G F G Y W - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d N R Q A * Q G S E M P S V K T G G A K I F R G V G P S L P T Q T N - e I A N R E S G A K W Q P F K Q A G Q K L S D A L G R P F P P K P I - f L Q T A S V A R K G N P F S K H G R S * H I P W G G P F P P N P Y Q - EciI PinAI | | GGGCGCTTTTTCCGTTTCCTCCCTCACTGAACTGATGGGCCTCGGGCGTCCGGGTTGGCGGAAGCGGTTTAACTCACCCCAAGGCGGGAAAACCGGTTTT 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 CCCGCGAAAAAGGCAAAGGAGGGAGTGACTTGACTACCCGGAGCCCGCAGGCCCAACCGCCTTCGCCAAATTGAGTGGGGTTCCGCCCTTTTGGCCAAAA a A L F P F P P S L N * W A S G V R V G G S G L T H P K A G K P V F - b G R F F R F L P H * T D G P R A S G L A E A V * L T P R R E N R F S - c G A F S V S S L T E L M G L G R P G W R K R F N S P Q G G K T G F - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d P R K K R K R G * Q V S P G R A D P N A S A T * S V G L R S F R N - e P A S K G N G G E S F Q H A E P T R T P P L P K V * G L A P F G T K - f P A K E T E E R V S S I P R P R G P Q R F R N L E G W P P F V P K - SmaI ApaI | | CCCCAAAATCGGGGGGATACCCCGGGAAAAAACTGGTAAACAAAAAGGCCAAACAAAGGCGCAGAAAACCCAAAAAAGGGCCCCT 801 ---------+---------+---------+---------+---------+---------+---------+---------+----- 885 GGGGTTTTAGCCCCCCTATGGGGCCCTTTTTTGACCATTTGTTTTTCCGGTTTGTTTCCGCGTCTTTTGGGTTTTTTCCCGGGGA a P K I G G I P R E K T G K Q K G Q T K A Q K T Q K R A P - b P K S G G Y P G K K L V N K K A K Q R R R K P K K G P - c P Q N R G D T P G K N W * T K R P N K G A E N P K K G P - 801 ---------+---------+---------+---------+---------+---------+---------+---------+----- 885 d E G F D P P Y G P F F S T F L F A L C L R L F G L F P G R - e G L I P P I G R S F V P L C F P W V F A C F V W F L A G - f G W F R P S V G P F F Q Y V F L G F L P A S F G F F P G - Enzymes that do cut: ApaI BamHI BglI Bpu1102I BsaBI BsbI BspMI BsrBI BstXI EagI EciI EcoRI EcoRV HindIII HpaI KpnI MscI NotI PinAI PstI SacI SmaI SphI SrfI VspI XcmI XhoI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI Bce83I BcgI BclI BfiI BglII BplI BpmI Bpu10I BsaI BsaXI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII BssSI Bst1107I BstEII Bsu36I ClaI DraI DraIII DrdI DrdII EarI Eco47III Eco57I EcoNI FseI FspI HgiEII MfeI MluI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI Sse8387I Sse8647I SspI StuI SwaI Tth111I XbaI XmnI