(Linear) MAP of: ./Fgr-S_4_G01_T7.seq check: 791 from: 1 to: 888 Fgr-S_4_G01_T7 888 26 604 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:35 .. EagI NotI EcoRV XbaI BsrBI| BsaBI | EcoRI ApaI | XhoI || BstXI | | PstI|Bpu1102I EagI KpnI | | | || | | | || | | | GGATTCGATTGGGCCCTCTAGATGCTGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAGCGTGGTCGCGGCCGAGGTACCCTTGTT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCTAAGCTAACCCGGGAGATCTACGACGAGCTCGCCGGCGGTCACACTACCTATAGACGTCTTAAGCCGAATCGCACCAGCGCCGGCTCCATGGGAACAA a G F D W A L * M L L E R P P V * W I S A E F G L A W S R P R Y P C C - b D S I G P S R C C S S G R Q C D G Y L Q N S A * R G R G R G T L V - c I R L G P L D A A R A A A S V M D I C R I R L S V V A A E V P L L - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d S E I P G E L H Q E L P R W H S P Y R C F E A * R P R P R P V R T - e N S Q A R * I S S S R G G T H H I D A S N P K A H D R G L Y G Q - f I R N P G R S A A R A A A L T I S I Q L I R S L T T A A S T G K N - GCCCTTGTCCTGGTTGTTGCACTTGTCCTATTTGTTGGCCTTGTCCTGGTTGTTGCGCTTGTCCTGACTGCTGCGGGGACGTTGGGCAGTGCCCTTGTTG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CGGGAACAGGACCAACAACGTGAACAGGATAAACAACCGGAACAGGACCAACAACGCGAACAGGACTGACGACGCCCCTGCAACCCGTCACGGGAACAAC a P C P G C C T C P I C W P C P G C C A C P D C C G D V G Q C P C C - b A L V L V V A L V L F V G L V L V V A L V L T A A G T L G S A L V A - c P L S W L L H L S Y L L A L S W L L R L S * L L R G R W A V P L L - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d A R T R T T A S T R N T P R T R T T A S T R V A A P V N P L A R T - e Q G Q G P Q Q V Q G I Q Q G Q G P Q Q A Q G S Q Q P S T P C H G Q Q - f G K D Q N N C K D * K N A K D Q N N R K D Q S S R P R Q A T G K N - CCCTTGTCCTGGTTGTTGCCCTTGTCCTGGCTGCTGCGGAGAAGTTGGGTAGTACCCTTGTTGCCCTTGTCCTAGTTGTTGCCCTTGTCCTGGCTGCTGT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GGGAACAGGACCAACAACGGGAACAGGACCGACGACGCCTCTTCAACCCATCATGGGAACAACGGGAACAGGATCAACAACGGGAACAGGACCGACGACA a P C P G C C P C P G C C G E V G * Y P C C P C P S C C P C P G C C - b L V L V V A L V L A A A E K L G S T L V A L V L V V A L V L A A V - c P L S W L L P L S W L L R R S W V V P L L P L S * L L P L S W L L W - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d A R T R T T A R T R A A A S F N P L V R T A R T R T T A R T R A A T - e G Q G P Q Q G Q G P Q Q P S T P Y Y G Q Q G Q G L Q Q G Q G P Q Q - f G K D Q N N G K D Q S S R L L Q T T G K N G K D * N N G K D Q S S - EagI NotI BglI| BspMI|| SmaI ||| HindIII SrfI |||BsrBI EcoRI BstXI EagI SpeI BamHI SacI KpnI | | ||| | | | | | | | | | GGAGAAGTTGGATAGTACCTGCCCGGGCGGCCGCTCGAAAGCCGAATTCCAGCACACTGGCGGCCGTTACTAGTGGATCCGAGCTCGGTACCAAGCTTGG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CCTCTTCAACCTATCATGGACGGGCCCGCCGGCGAGCTTTCGGCTTAAGGTCGTGTGACCGCCGGCAATGATCACCTAGGCTCGAGCCATGGTTCGAACC a G E V G * Y L P G R P L E S R I P A H W R P L L V D P S S V P S L A - b E K L D S T C P G G R S K A E F Q H T G G R Y * W I R A R Y Q A W - c R S W I V P A R A A A R K P N S S T L A A V T S G S E L G T K L G - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S F N S L V Q G P P R E F A S N W C V P P R * * H I R A R Y W A Q - e P S T P Y Y R G P R G S S L R I G A C Q R G N S T S G L E T G L K - f H L L Q I T G A R A A A R F G F E L V S A A T V L P D S S P V L S P - BsrBI | CGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GCATTAGTACCAGTATCGACAAAGGACACACTTTAACAATAGGCGAGTGTTAAGGTGTGTTGTATGCTCGGCCTTCGTATTTCACATTTCGGACCCCACG a * S W S * L F P V * N C Y P L T I P H N I R A G S I K C K A W G A - b R N H G H S C F L C E I V I R S Q F H T T Y E P E A * S V K P G V P - c V I M V I A V S C V K L L S A H N S T Q H T S R K H K V * S L G C - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d R L * P * L Q K R H S I T I R E C N W V V Y S G S A Y L T F G P T - e A Y D H D Y S N G T H F Q * G S V I G C L M R A P L M F H L A Q P A - f T I M T M A T E Q T F N N D A * L E V C C V L R F C L T Y L R P H - VspI PvuII VspI | | | CTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 GATTACTCACTCGATTGAGTGTAATTAACGCAACGCGAGTGACGGGCGAAAGGTCAGCCCTTTGGACAGCACGGTCGACGTAATTACTTAGCCGGTTGCG a * * V S * L T L I A L R S L P A F Q S G N L S C Q L H * * I G Q R - b N E * A N S H * L R C A H C P L S S R E T C R A S C I N E S A N A - c L M S E L T H I N C V A L T A R F P V G K P V V P A A L M N R P T R - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d G L S H A L E C * N R Q A * Q G S E L R S V Q R A L Q M L S D A L A - e * H T L * S V N I A N R E S G A K W D P F R D H W S C * H I P W R - f R I L S S V * M L Q T A S V A R K G T P F G T T G A A N I F R G V - EarI BsrBI BsaXI SapI Bce83I| | | || GCGGGGAGAGGCGGTTTGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACT 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CGCCCCTCTCCGCCAAACGCATAACCCGCGAGAAGGCGAAGGAGCGAGTGACTGAGCGACGCGAGCCAGCAAGCCGACGCCGCTCGCCATAGTCGAGTGA a A G R G G L R I G R S S A S S L T D S L R S V V R L R R A V S A H S - b R G E A V C V L G A L P L P R S L T R C A R S F G C G E R Y Q L T - c G E R R F A Y W A L F R F L A H * L A A L G R S A A A S G I S S L - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d R P S A T Q T N P A R G S G R E S V R Q A R D N P Q P S R Y * S V - e A P L P P K R I P R E E A E E S V S E S R E T T R S R R A T D A * - f R P S L R N A Y Q A S K R K R A * Q S A A S P R E A A A L P I L E S - AceIII BspLU11I | | CAAGGCGGTAATACGGTTATCCCACAGATCAGGGGATAACGCANGGAAAGACATGTGAAGCAAAAGGCCAACAAAAGGGCCAGGAACCGTTAAAAGGCCC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 GTTCCGCCATTATGCCAATAGGGTGTCTAGTCCCCTATTGCGTNCCTTTCTGTACACTTCGTTTTCCGGTTGTTTTCCCGGTCCTTGGCAATTTTCCGGG a R R * Y G Y P T D Q G I T ? G K T C E A K G Q Q K G Q E P L K G P - b Q G G N T V I P Q I R G * R ? E R H V K Q K A N K R A R N R * K A R - c K A V I R L S H R S G D N A ? K D M * S K R P T K G P G T V K R P - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d * P P L V T I G C I L P Y R ? S L C T F C F A L L L A L F R * F A - e E L R Y Y P * G V S * P I V C P F V H S A F P W C F P W S G N F P G - f L A T I R N D W L D P S L A ? F S M H L L L G V F P G P V T L L G - Bsu36I EcoNI | | GCGTTGCTTGGCGGTTTTTTCCTTAGGCTCCCGCCCCCCTTGACGAGGCATCACAAAAAATCGACGGTTCAGGTTCAAAGGGGGCCAG 801 ---------+---------+---------+---------+---------+---------+---------+---------+-------- 888 CGCAACGAACCGCCAAAAAAGGAATCCGAGGGCGGGGGGAACTGCTCCGTAGTGTTTTTTAGCTGCCAAGTCCAAGTTTCCCCCGGTC a R C L A V F S L G S R P P * R G I T K N R R F R F K G G Q - b V A W R F F P * A P A P L D E A S Q K I D G S G S K G A - c A L L G G F F L R L P P P L T R H H K K S T V Q V Q R G P - 801 ---------+---------+---------+---------+---------+---------+---------+---------+-------- 888 d R T A Q R N K G * A G A G R S S A D C F I S P E P E F P A L - e R Q K A T K E K P E R G G Q R P M V F F R R N L N L P P W - f A N S P P K K R L S G G G K V L C * L F D V T * T * L P G - Enzymes that do cut: AceIII ApaI BamHI Bce83I BglI Bpu1102I BsaBI BsaXI BspLU11I BspMI BsrBI BstXI Bsu36I EagI EarI EcoNI EcoRI EcoRV HindIII KpnI NotI PstI PvuII SacI SapI SmaI SpeI SrfI VspI XbaI XhoI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI BcgI BclI BfiI BglII BplI BpmI Bpu10I BsaI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BsrDI BsrGI BssHII BssSI Bst1107I BstEII ClaI DraI DraIII DrdI DrdII EciI Eco47III Eco57I FseI FspI HgiEII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SacII SalI SanDI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I XcmI XmnI