(Linear) MAP of: ./Fgr-S_7_G07_T7.seq check: 7975 from: 1 to: 862 Fgr-S_7_G07_T7 862 10 649 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:35 .. XhoI EagI EcoRV XbaI SphI| NotI BsaBI | EcoRI ApaI | NsiI ||BsrBI| BstXI | | PstI|Bpu1102I EagI | | | || || | | | || | | GAATTGGGGCCCTCTAGATGCATGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAGCGTGGTCGCGGCCGAGGTGTGGACATGGCC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAACCCCGGGAGATCTACGTACGAGCTCGCCGGCGGTCACACTACCTATAGACGTCTTAAGCCGAATCGCACCAGCGCCGGCTCCACACCTGTACCGG a E L G P S R C M L E R P P V * W I S A E F G L A W S R P R C G H G R - b N W G P L D A C S S G R Q C D G Y L Q N S A * R G R G R G V D M A - c I G A L * M H A R A A A S V M D I C R I R L S V V A A E V W T W P - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I P A R * I C A R A A A L T I S I Q L I R S L T T A A S T H V H G - e F Q P G R S A H E L P R W H S P Y R C F E A * R P R P R P T S M A - f N P G E L H M S S R G G T H H I D A S N P K A H D R G L H P C P - BsbI BsrDI EciI | | | GCGTGTGTTGTGTGTGCGTCTGTCATTGCATTGGCGTCATCTTCCCCCGTCCATCGGTCCATGTCGAGTTGTTGTAGACCATTTCGTGTTTATGGCGGAA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CGCACACAACACACACGCAGACAGTAACGTAACCGCAGTAGAAGGGGGCAGGTAGCCAGGTACAGCTCAACAACATCTGGTAAAGCACAAATACCGCCTT a V C C V C V C H C I G V I F P R P S V H V E L L * T I S C L W R N - b A C V V C A S V I A L A S S S P V H R S M S S C C R P F R V Y G G I - c R V L C V R L S L H W R H L P P S I G P C R V V V D H F V F M A E - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d R T N H T R R D N C Q R * R G G D M P G H R T T T S W K T N I A S - e A H T T H A D T M A N A D D E G T W R D M D L Q Q L G N R T * P P - f R T H Q T H T Q * Q M P T M K G R G D T W T S N N Y V M E H K H R F - EagI NotI BglI| BspMI|| SmaI ||| Psp1406I SrfI |||BsrBI EcoRI BstXI EagI SpeI BamHI | | ||| | | | | | | TAACTGAACGCCCAAGGGCAACGTTTTTGAGTACCTGCCCGGGCGGCCGCTCGAAAGCCGAATTCCAGCACACTGGCGGCCGTTACTAGTGGATCCGAGC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 ATTGACTTGCGGGTTCCCGTTGCAAAAACTCATGGACGGGCCCGCCGGCGAGCTTTCGGCTTAAGGTCGTGTGACCGCCGGCAATGATCACCTAGGCTCG a N * T P K G N V F E Y L P G R P L E S R I P A H W R P L L V D P S - b T E R P R A T F L S T C P G G R S K A E F Q H T G G R Y * W I R A - c * L N A Q G Q R F * V P A R A A A R K P N S S T L A A V T S G S E L - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d Y S F A W P C R K Q T G A R A A A R F G F E L V S A A T V L P D S - e I V S R G L A V N K L V Q G P P R E F A S N W C V P P R * * H I R A - f L Q V G L P L T K S Y R G P R G S S L R I G A C Q R G N S T S G L - HindIII SacI KpnI | BsrBI | | | | TCGGTACCAAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 AGCCATGGTTCGAACCGCATTAGTACCAGTATCGACAAAGGACACACTTTAACAATAGGCGAGTGTTAAGGTGTGTTGTATGCTCGGCCTTCGTATTTCA a S V P S L A * S W S * L F P V * N C Y P L T I P H N I R A G S I K C - b R Y Q A W R N H G H S C F L C E I V I R S Q F H T T Y E P E A * S - c G T K L G V I M V I A V S C V K L L S A H N S T Q H T S R K H K V - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S P V L S P T I M T M A T E Q T F N N D A * L E V C C V L R F C L T - e R Y W A Q R L * P * L Q K R H S I T I R E C N W V V Y S G S A Y L - f E T G L K A Y D H D Y S N G T H F Q * G S V I G C L M R A P L M F - VspI PvuII VspI | | | GTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CATTTCGGACCCCACGGATTACTCACTCGATTGAGTGTAATTAACGCAACGCGAGTGACGGGCGAAAGGTCAGCCCTTTGGACAGCACGGTCGACGTAAT a K A W G A * * V S * L T L I A L R S L P A F Q S G N L S C Q L H * - b V K P G V P N E * A N S H * L R C A H C P L S S R E T C R A S C I N - c * S L G C L M S E L T H I N C V A L T A R F P V G K P V V P A A L - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d Y L R P H R I L S S V * M L Q T A S V A R K G T P F G T T G A A N - e T F G P T G L S H A L E C * N R Q A * Q G S E L R S V Q R A L Q M - f H L A Q P A * H T L * S V N I A N R E S G A K W D P F R D H W S C * - EarI BsaXI SapI | | ATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TACTTAGCCGGTTGCGCGCCCCTCTCCGCCAAACGCATAACCCGCGAGAAGGCGAAGGAGCGAGTGACTGAGCGACGCGAGCCAGCAAGCCGACGCCGCT a * I G Q R A G R G G L R I G R S S A S S L T D S L R S V V R L R R - b E S A N A R G E A V C V L G A L P L P R S L T R C A R S F G C G E - c M N R P T R G E R R F A Y W A L F R F L A H * L A A L G R S A A A S - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d I F R G V R P S L R N A Y Q A S K R K R A * Q S A A S P R E A A A - e L S D A L A R P S A T Q T N P A R G S G R E S V R Q A R D N P Q P S - f H I P W R A P L P P K R I P R E E A E E S V S E S R E T T R S R R - BsrBI AceIII BspLU11I | | | GCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGANAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CGCCATAGTCGAGTGAGTTTCCGCCATTATGCCAATAGGTGTCTTAGTCCCCTATTGCGTCCTNTCTTGTACACTCGTTTTCCGGTCGTTTTCCGGTCCT a A V S A H S K A V I R L S T E S G D N A G ? N M * A K G Q Q K A R N - b R Y Q L T Q R R * Y G Y P Q N Q G I T Q ? R T C E Q K A S K R P G - c G I S S L K G G N T V I H R I R G * R R ? E H V S K R P A K G Q E - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d L P I L E S L P P L V T I W L I L P Y R L ? S C T L L L G A F P W S - e R Y * S V * L R Y Y P * G C F * P I V C S L V H S C F A L L L G P - f A T D A * E F A T I R N D V S D P S L A P ? F M H A F P W C F A L - EciI Bce83I DrdI | | | ACCGTAAAAAGGCCGCGTTGCTGGCGTNTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAAGTGGCGAAAACCGAC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 TGGCATTTTTCCGGCGCAACGACCGCANAAAGGTATCCGAGGCGGGGGGACTGCTCGTAGTGTTTTTAGCTGCGAGTTCAGTCTTCACCGCTTTTGGCTG a R K K A A L L A ? F H R L R P P D E H H K N R R S S Q K W R K P T - b T V K R P R C W R ? S I G S A P L T S I T K I D A Q V R S G E N R Q - c P * K G R V A G V F P * A P P P * R A S Q K S T L K S E V A K T D - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d G Y F P R T A P T ? G Y A G G G Q R A D C F D V S L D S T A F V S - e V T F L G R Q Q R ? E M P E A G R V L M V F I S A * T L L P S F R - f F R L F A A N S A ? K W L S R G G S S C * L F R R E L * F H R F G V - BssSI | AGGACTATAAAGATACCAAGGCGTTTCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGN 801 ---------+---------+---------+---------+---------+---------+-- 862 TCCTGATATTTCTATGGTTCCGCAAAGGGGACCTTCGAGGGAGCACGCGAGAGGACAAGGCN a G L * R Y Q G V S P G S S L V R S P V P - b D Y K D T K A F P L E A P S C A L L F R - c R T I K I P R R F P W K L P R A L S C S - 801 ---------+---------+---------+---------+---------+---------+-- 862 d L V I F I G L R K G Q F S G R A S E Q E ? - e C S * L S V L A N G R S A G E H A R R N R - f P S Y L Y W P T E G P L E R T R E G T G - Enzymes that do cut: AceIII ApaI BamHI Bce83I BglI Bpu1102I BsaBI BsaXI BsbI BspLU11I BspMI BsrBI BsrDI BssSI BstXI DrdI EagI EarI EciI EcoRI EcoRV HindIII KpnI NotI NsiI Psp1406I PstI PvuII SacI SapI SmaI SpeI SphI SrfI VspI XbaI XhoI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI BcgI BclI BfiI BglII BplI BpmI Bpu10I BsaI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BsrGI BssHII Bst1107I BstEII Bsu36I ClaI DraI DraIII DrdII Eco47III Eco57I EcoNI FseI FspI HgiEII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI PvuI RcaI RsrII SacII SalI SanDI ScaI SexAI SfiI SgfI SgrAI SnaBI Sse8387I Sse8647I SspI StuI SwaI Tth111I XcmI XmnI