(Linear) MAP of: ./Fgr-S_9_B02_T7.seq check: 8829 from: 1 to: 898 Fgr-S_9_B02_T7 898 3 554 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:34 .. EagI NotI EcoRV XbaI BsrBI| BsaBI | EcoRI ApaI | XhoI || BstXI | | PstI|Bpu1102I EagI | | | || | | | || | | CGATTGGGCCCTCTAGATGCTGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAGCGTGGTCGCGGCCGAGGTTTTTTTTTTTTTTT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 GCTAACCCGGGAGATCTACGACGAGCTCGCCGGCGGTCACACTACCTATAGACGTCTTAAGCCGAATCGCACCAGCGCCGGCTCCAAAAAAAAAAAAAAA a R L G P L D A A R A A A S V M D I C R I R L S V V A A E V F F F F F - b D W A L * M L L E R P P V * W I S A E F G L A W S R P R F F F F F - c I G P S R C C S S G R Q C D G Y L Q N S A * R G R G R G F F F F F - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I P G E L H Q E L P R W H S P Y R C F E A * R P R P R P K K K K K - e S Q A R * I S S S R G G T H H I D A S N P K A H D R G L N K K K K - f N P G R S A A R A A A L T I S I Q L I R S L T T A A S T K K K K - Eco57I DraI | | TTTTTTTTTTTTTTTTTTTTTTGCTTCAGGGAAGGGCCATTTTAAACAAATTCACGTAAGATAACAGACAAACCCACATCACAATCATTTTACAACCAAA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 AAAAAAAAAAAAAAAAAAAAAACGAAGTCCCTTCCCGGTAAAATTTGTTTAAGTGCATTCTATTGTCTGTTTGGGTGTAGTGTTAGTAAAATGTTGGTTT a F F F F F F L L Q G R A I L N K F T * D N R Q T H I T I I L Q P N - b F F F F F F F C F R E G P F * T N S R K I T D K P T S Q S F Y N Q T - c F F F F F F F A S G K G H F K Q I H V R * Q T N P H H N H F T T K - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d K K K K K K K A E P F P W K L C I * T L Y C V F G C * L * K V V L - e K K K K K K K Q K L S P G N * V F E R L I V S L G V D C D N * L W - f K K K K K K K K S * P L A M K F L N V Y S L L C V W M V I M K C G F - BseRI BsrGI | | CTTACAAAAACTAACAAGTAATGCAGAGCTATTAAAATACCAACCAATTATTTATATGGGAGCCTCTTTAGCTCCTCTTTATTCATGTACAGATTAAAAT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GAATGTTTTTGATTGTTCATTACGTCTCGATAATTTTATGGTTGGTTAATAAATATACCCTCGGAGAAATCGAGGAGAAATAAGTACATGTCTAATTTTA a L Q K L T S N A E L L K Y Q P I I Y M G A S L A P L Y S C T D * N - b Y K N * Q V M Q S Y * N T N Q L F I W E P L * L L F I H V Q I K I - c L T K T N K * C R A I K I P T N Y L Y G S L F S S S L F M Y R L K * - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S V F V L L Y H L A I L I G V L * K Y P L R K L E E K N M Y L N F - e V * L F * C T I C L * * F V L W N N I H S G R * S R K I * T C I L I - f K C F S V L L A S S N F Y W G I I * I P A E K A G R * E H V S * F - BspMI SmaI | BsrDI DraI SrfI | EcoRI BstXI EagI | | | | | | | AATTGACCCTAGTTAGGGTATCCATCAACATTGCGGGAGGGCTTTAAACCTGCCCGGGCGGGCGCTCGAAAGCCGAATTCCAGCACACTGGCGGCCGTTA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TTAACTGGGATCAATCCCATAGGTAGTTGTAACGCCCTCCCGAAATTTGGACGGGCCCGCCCGCGAGCTTTCGGCTTAAGGTCGTGTGACCGCCGGCAAT a N * P * L G Y P S T L R E G F K P A R A G A R K P N S S T L A A V T - b I D P S * G I H Q H C G R A L N L P G R A L E S R I P A H W R P L - c L T L V R V S I N I A G G L * T C P G G R S K A E F Q H T G G R Y - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d Y N V R T L T D M L M A P P S * V Q G P P R E F A S N W C V P P R * - e I S G L * P I W * C Q P L A K F R G P R A S S L R I G A C Q R G N - f L Q G * N P Y G D V N R S P K L G A R A P A R F G F E L V S A A T - HindIII BamHI SacI KpnI | BsrBI | | | | | CTAGGGGATCCGAGCTCGGTACCAAGCTTGGCGTAATCATGGGCATAGCTGTTTCCTGTGGGAAATTGTTATCCGCTCACAATTCCACACAACATACGAG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GATCCCCTAGGCTCGAGCCATGGTTCGAACCGCATTAGTACCCGTATCGACAAAGGACACCCTTTAACAATAGGCGAGTGTTAAGGTGTGTTGTATGCTC a R G S E L G T K L G V I M G I A V S C G K L L S A H N S T Q H T S - b L G D P S S V P S L A * S W A * L F P V G N C Y P L T I P H N I R A - c * G I R A R Y Q A W R N H G H S C F L W E I V I R S Q F H T T Y E - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d * P I R A R Y W A Q R L * P C L Q K R H S I T I R E C N W V V Y S - e S P S G L E T G L K A Y D H A Y S N G T P F Q * G S V I G C L M R - f V L P D S S P V L S P T I M P M A T E Q P F N N D A * L E V C C V L - VspI | CCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGGGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 GGCCTTCGTATTTCACATTTCGGACCCCACGGATTACTCCCTCGATTGAGTGTAATTAACGCAACGCGAGTGACGGGCGAAAGGTCAGCCCTTTGGACAG a R K H K V * S L G C L M R E L T H I N C V A L T A R F P V G K P V - b G S I K C K A W G A * * G S * L T L I A L R S L P A F Q S G N L S - c P E A * S V K P G V P N E G A N S H * L R C A H C P L S S R E T C R - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d G S A Y L T F G P T G L S P A L E C * N R Q A * Q G S E L R S V Q - e A P L M F H L A Q P A * H P L * S V N I A N R E S G A K W D P F R D - f R F C L T Y L R P H R I L S S V * M L Q T A S V A R K G T P F G T - PvuII VspI | | GTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGGTTGCGTATTGGGGCGCTTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGGC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CACGGTCGACGTAATTACTTAGCCGGTTGCGCGCCCCTCTCCGCCCAACGCATAACCCCGCGAAAGGCGAAGGAGCGAGTGACTGAGCGACGCGAGCCCG a V P A A L M N R P T R G E R R V A Y W G A F R F L A H * L A A L G R - b C Q L H * * I G Q R A G R G G L R I G A L S A S S L T D S L R S G - c A S C I N E S A N A R G E A G C V L G R F P L P R S L T R C A R A - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d R A L Q M L S D A L A R P S A P Q T N P R K G S G R E S V R Q A R A - e H W S C * H I P W R A P L P P N R I P A S E A E E S V S E S R E P - f T G A A N I F R G V R P S L R T A Y Q P A K R K R A * Q S A A S P - EciI AceIII | | GTTCGGGTGCGGGGAGGCGGAATCAGCTCACTCAAAGGCGGTGATACGGGTTTCCCCAGAATCAGGGGGATACCCAAGAAAGAACATGGGGACCAAAAGG 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 CAAGCCCACGCCCCTCCGCCTTAGTCGAGTGAGTTTCCGCCACTATGCCCAAAGGGGTCTTAGTCCCCCTATGGGTTCTTTCTTGTACCCCTGGTTTTCC a S G A G R R N Q L T Q R R * Y G F P Q N Q G D T Q E R T W G P K G - b V R V R G G G I S S L K G G D T G F P R I R G I P K K E H G D Q K A - c F G C G E A E S A H S K A V I R V S P E S G G Y P R K N M G T K R - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d N P H P S A S D A * E F A T I R T E G S D P P Y G L F F M P V L L - e T R T R P P P I L E S L P P S V P K G L I L P I G L F S C P S W F - f R E P A P L R F * S V * L R H Y P N G W F * P S V W S L V H P G F P - EciI Bsu36I BseRI | | | CCAGCAAAAGGGCCGGAACCGAAAAAAGGCCCGGTGGTGGGCGTTTTCCATAGGCTCCGCCCCCCTGAGGAGCTTCACAAAATGGACGTTCAGTTAGG 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+-------- 898 GGTCGTTTTCCCGGCCTTGGCTTTTTTCCGGGCCACCACCCGCAAAAGGTATCCGAGGCGGGGGGACTCCTCGAAGTGTTTTACCTGCAAGTCAATCC a Q Q K G R N R K K A R W W A F S I G S A P L R S F T K W T F S * - b S K R A G T E K R P G G G R F P * A P P P * G A S Q N G R S V R - c P A K G P E P K K G P V V G V F H R L R P P E E L H K M D V Q L - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+-------- 898 d G A F P G S G F F P G T T P T K W L S R G G S S S * L I S T * N P - e A L L L A P V S F L G P P P R K G Y A G G G Q P A E C F P R E T L - f W C F P R F R F F A R H H A N E M P E A G R L L K V F H V N L * - Enzymes that do cut: AceIII ApaI BamHI Bpu1102I BsaBI BseRI BspMI BsrBI BsrDI BsrGI BstXI Bsu36I DraI EagI EciI Eco57I EcoRI EcoRV HindIII KpnI NotI PstI PvuII SacI SmaI SrfI VspI XbaI XhoI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI Bce83I BcgI BclI BfiI BglI BglII BplI BpmI Bpu10I BsaI BsaXI BsbI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BssHII BssSI Bst1107I BstEII ClaI DraIII DrdI DrdII EarI Eco47III EcoNI FseI FspI HgiEII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I XcmI XmnI