BLASTX 2.1.3 [Apr-1-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query=
/phillip/projects/Xu/Fgr-S/seq_dir/blast_NcrP/Fgr-S_1_B11_T7.seq
         (151 letters)

Database: /phillip/Ncr/Ncr_P
           6531 sequences; 3,158,374 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCU07583.1 NCU07583.1 predicted protein (11502 - 12848)                23  8.9
NCU07907.1 NCU07907.1 predicted protein (24675 - 23632)                23  8.9

>NCU07583.1 NCU07583.1 predicted protein (11502 - 12848)
          Length = 448

 Score = 23.1 bits (48), Expect = 8.9
 Identities = 7/8 (87%), Positives = 8/8 (99%)
 Frame = -1

Query: 118 HHIPGHGS 95
           HHIPGHG+
Sbjct: 40  HHIPGHGT 47



>NCU07907.1 NCU07907.1 predicted protein (24675 - 23632)
          Length = 347

 Score = 23.1 bits (48), Expect = 8.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 118 HHIPGHGSISLAIERGK 68
           + IPG G+  LA+E+G+
Sbjct: 179 YRIPGEGNEKLALEKGR 195



  Database: /phillip/Ncr/Ncr_P
    Posted date:  May 20, 2002 12:05 PM
  Number of letters in database: 3,158,374
  Number of sequences in database:  6531
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 918511
Number of Sequences: 6531
Number of extensions: 13044
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of query: 50
length of database: 3,158,374
effective HSP length: 25
effective length of query: 24
effective length of database: 2,995,099
effective search space: 71882376
effective search space used: 71882376
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)