BLASTX 2.1.3 [Apr-1-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query=
/phillip/projects/Xu/Fgr-S/seq_dir/blast_NcrP/Fgr-S_1_G02_T7.seq
         (241 letters)

Database: /phillip/Ncr/Ncr_P
           6531 sequences; 3,158,374 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCU02704.1 NCU02704.1 hypothetical protein (205784 - 204030)           28  0.58
NCU07535.1 NCU07535.1 predicted protein (54066 - 56986)                25  4.9
NCU07228.1 NCU07228.1 predicted protein (242754 - 242135)              25  4.9
NCU09203.1 NCU09203.1 hypothetical protein (49276 - 47854)             24  6.5
NCU02324.1 NCU02324.1 predicted protein (10636 - 14607)                24  8.4

>NCU02704.1 NCU02704.1 hypothetical protein (205784 - 204030)
          Length = 562

 Score = 27.7 bits (60), Expect = 0.58
 Identities = 10/26 (38%), Positives = 19/26 (72%)
 Frame = -2

Query: 240 RAAARAGTIMHYLYSSSLEFSPHIEL 163
           ++  R+ TI H+LY+  ++F+P +EL
Sbjct: 330 KSMTRSLTIPHFLYADEVDFTPLVEL 355



>NCU07535.1 NCU07535.1 predicted protein (54066 - 56986)
          Length = 586

 Score = 24.6 bits (52), Expect = 4.9
 Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +1

Query: 121 PVMSVGCIPVPVS--SELDVWAELQ 189
           P+ ++ C P+P+S  +E D W+ L+
Sbjct: 207 PMTNIACCPIPLSPTAETDGWSYLE 231



>NCU07228.1 NCU07228.1 predicted protein (242754 - 242135)
          Length = 182

 Score = 24.6 bits (52), Expect = 4.9
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -3

Query: 179 AHTSSSEDTGTG 144
           AHTSS EDTG G
Sbjct: 61  AHTSSPEDTGVG 72



>NCU09203.1 NCU09203.1 hypothetical protein (49276 - 47854)
          Length = 430

 Score = 24.3 bits (51), Expect = 6.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 162 RARCVG*TPASYYISSALLYLPGR 233
           RAR VG  PASY I+    Y+PG+
Sbjct: 381 RARPVG-LPASYTIAPKSTYIPGQ 403



>NCU02324.1 NCU02324.1 predicted protein (10636 - 14607)
          Length = 1272

 Score = 23.9 bits (50), Expect = 8.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 59 LELYYN*PHHPRH 97
          LE   N PHHPRH
Sbjct: 56 LESILNNPHHPRH 68



  Database: /phillip/Ncr/Ncr_P
    Posted date:  May 20, 2002 12:05 PM
  Number of letters in database: 3,158,374
  Number of sequences in database:  6531
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1326193
Number of Sequences: 6531
Number of extensions: 22784
Number of successful extensions: 51
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of query: 80
length of database: 3,158,374
effective HSP length: 39
effective length of query: 40
effective length of database: 2,903,665
effective search space: 116146600
effective search space used: 116146600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)