BLASTX 2.1.3 [Apr-1-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query=
/phillip/projects/Xu/Fgr-S/seq_dir/blast_NcrP/Fgr-S_1_G07_T7.seq
         (263 letters)

Database: /phillip/Ncr/Ncr_P
           6531 sequences; 3,158,374 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCU02040.1 NCU02040.1 hypothetical protein ( (AL442164) hypothet...    26  2.0
NCU08634.1 NCU08634.1 hypothetical protein (81450 - 83418)             25  3.5
NCU00898.1 NCU00898.1 hypothetical protein (119429 - 120881)           25  4.5
NCU08311.1 NCU08311.1 predicted protein (81266 - 80871)                25  5.9
NCU07448.1 NCU07448.1 hypothetical protein (88055 - 86037)             25  5.9
NCU07920.1 NCU07920.1 hypothetical protein (61032 - 63904)             25  5.9
NCU02762.1 NCU02762.1 hypothetical protein (13422 - 6705)              24  7.7

>NCU02040.1 NCU02040.1 hypothetical protein ( (AL442164)
           hypothetical protein [Neurospora cr
          Length = 609

 Score = 26.2 bits (56), Expect = 2.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 231 WDAQWSGNLDPSGR 190
           WD  W G LDP  R
Sbjct: 174 WDTDWEGKLDPEAR 187



>NCU08634.1 NCU08634.1 hypothetical protein (81450 - 83418)
          Length = 540

 Score = 25.4 bits (54), Expect = 3.5
 Identities = 11/23 (47%), Positives = 13/23 (55%)
 Frame = +2

Query: 173 WTPSAALPEGSRFPDHWASHSTA 241
           W PS     GS   +H+A HSTA
Sbjct: 40  WNPSVRAQTGSDEFEHYAFHSTA 62



>NCU00898.1 NCU00898.1 hypothetical protein (119429 - 120881)
          Length = 435

 Score = 25.0 bits (53), Expect = 4.5
 Identities = 20/76 (26%), Positives = 31/76 (40%)
 Frame = +2

Query: 23  SYFLSETASRTGHHQLSIATPGAATSIILGFLLVPAMMVAGRCSCS*AERWTPSAALPEG 202
           S F  E  S  G   LS  +P    ++  G L +P +M   + + +    WT +  L   
Sbjct: 310 SSFTREFCSLLG---LSAESP-LYVAVTAGALALPLLMKYQQATRAKGTEWTTTNELAFE 365

Query: 203 SRFPDHWASHSTATCP 250
           +  P+    HS   CP
Sbjct: 366 TPLPERMLYHSIFVCP 381



>NCU08311.1 NCU08311.1 predicted protein (81266 - 80871)
          Length = 131

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 82  TRRRNLDHPRLLAGSCHDGCWEMLLFI 162
           TR R+L    L   +CH GC   + F+
Sbjct: 97  TRNRDLGETSLGVDTCHQGCCFTVTFV 123



>NCU07448.1 NCU07448.1 hypothetical protein (88055 - 86037)
          Length = 561

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
 Frame = +3

Query: 51  GQDTINSQLRHQ------APQPRSSSASCWFLP*WLLGDAPVHRPRDGLQVLLSLRDPGS 212
           G   +  QLR +      + +PR   A  W    W   D PVH   +   V + +R+   
Sbjct: 346 GNGPVGPQLRREYGPFLTSRRPREYRAPSWS---WASIDTPVHYWHEHFGVPMKMRNLQV 402

Query: 213 LTTG 224
           L+TG
Sbjct: 403 LSTG 406



>NCU07920.1 NCU07920.1 hypothetical protein (61032 - 63904)
          Length = 731

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 34  IRNGKQDRTPSTLNCDTRRRNLDHP 108
           I  GK+  TP  LNC+  R + ++P
Sbjct: 613 IGEGKRWFTPDKLNCENERLDCENP 637



>NCU02762.1 NCU02762.1 hypothetical protein (13422 - 6705)
          Length = 2218

 Score = 24.3 bits (51), Expect = 7.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 199 GIQVP*PLGIPLYRHLPG 252
           G+Q+P PL  P+  +LPG
Sbjct: 55  GLQMPSPLAAPMSANLPG 72



  Database: /phillip/Ncr/Ncr_P
    Posted date:  May 20, 2002 12:05 PM
  Number of letters in database: 3,158,374
  Number of sequences in database:  6531
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1901774
Number of Sequences: 6531
Number of extensions: 41524
Number of successful extensions: 148
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of query: 87
length of database: 3,158,374
effective HSP length: 39
effective length of query: 48
effective length of database: 2,903,665
effective search space: 139375920
effective search space used: 139375920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)