BLASTX 2.1.3 [Apr-1-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query=
/phillip/projects/Xu/Fgr-S/seq_dir/blast_NcrP/Fgr-S_1_H09_T7.seq
         (317 letters)

Database: /phillip/Ncr/Ncr_P
           6531 sequences; 3,158,374 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NCU01624.1 NCU01624.1 hypothetical protein ( hypothetical protei...    29  0.41
NCU02663.1 NCU02663.1 hypothetical protein (52882 - 54779)             27  1.2
NCU00859.1 NCU00859.1 hypothetical protein (18385 - 19363)             26  3.5
NCU07841.1 NCU07841.1 predicted protein (9773 - 7855)                  25  4.5
NCU07706.1 NCU07706.1 predicted protein (67177 - 70579)                25  4.5
NCU06402.1 NCU06402.1 hypothetical protein (91559 - 90425)             25  5.9
NCU02692.1 NCU02692.1 predicted protein (166812 - 168344)              25  7.7
NCU01435.1 NCU01435.1 hypothetical protein (25739 - 23850)             25  7.7
NCU07532.1 NCU07532.1 predicted protein (35712 - 33691)                25  7.7

>NCU01624.1 NCU01624.1 hypothetical protein ( hypothetical protein
           B2O8.90 [imported] - Neur
          Length = 111

 Score = 28.9 bits (63), Expect = 0.41
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
 Frame = -3

Query: 258 CYVNISRLSKPLCCVSRTRT------CPVAAA 181
           C   ISR+  P CC+S TRT      CP AAA
Sbjct: 2   CTHTISRILCPRCCLSVTRTFTSESKCPSAAA 33



>NCU02663.1 NCU02663.1 hypothetical protein (52882 - 54779)
          Length = 492

 Score = 27.3 bits (59), Expect = 1.2
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 202 DMPGGGGQRVQCAQQ 158
           D+PGGGG+R+ C+ Q
Sbjct: 431 DLPGGGGKRLACSYQ 445



>NCU00859.1 NCU00859.1 hypothetical protein (18385 - 19363)
          Length = 247

 Score = 25.8 bits (55), Expect = 3.5
 Identities = 15/59 (25%), Positives = 25/59 (41%)
 Frame = -3

Query: 306 PGQVANFVICKQCIIYCYVNISRLSKPLCCVSRTRTCPVAAASGCSAPSSRQAGCCDRQ 130
           PG      +C+   + C  N+     P+CC    ++C +     C+AP     G C +Q
Sbjct: 98  PGMACTQQLCEPAGVQCGPNVCSGDTPVCC---NKSCGI-----CTAP----RGFCTQQ 144



>NCU07841.1 NCU07841.1 predicted protein (9773 - 7855)
          Length = 577

 Score = 25.4 bits (54), Expect = 4.5
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -1

Query: 266 SSTVMSTYLVCPSLCAVCRGRGHARWRRPAGAVRPAVGRQDVVIVSQQMNSF-LLFSSFP 90
           S +VM+ +      CA+CR +G   W      V   +  +D +I+ +Q N   + F    
Sbjct: 70  SHSVMTRFYSTGDKCALCRRKGDFGW------VYRCIVDRDALIMGKQANGIPVAFDGIG 123

Query: 89  C 87
           C
Sbjct: 124 C 124



>NCU07706.1 NCU07706.1 predicted protein (67177 - 70579)
          Length = 909

 Score = 25.4 bits (54), Expect = 4.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 186 PPPGMSSSSTHSTKAWTNEIC*HNS 260
           PPP  S     +T AWT+ I  H+S
Sbjct: 606 PPPAHSVFERPTTNAWTDAIIPHDS 630



>NCU06402.1 NCU06402.1 hypothetical protein (91559 - 90425)
          Length = 306

 Score = 25.0 bits (53), Expect = 5.9
 Identities = 10/23 (43%), Positives = 12/23 (51%)
 Frame = -3

Query: 132 QSADEFVSVVLKFSMLWFLPFWC 64
           Q+ D        FS+  FLPFWC
Sbjct: 231 QAIDAHSGYDFPFSLRHFLPFWC 253



>NCU02692.1 NCU02692.1 predicted protein (166812 - 168344)
          Length = 510

 Score = 24.6 bits (52), Expect = 7.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 130 LTITTSCLPTAGRTAPAG 183
           LTITT   P AG T+P G
Sbjct: 7   LTITTRVSPDAGTTSPIG 24



>NCU01435.1 NCU01435.1 hypothetical protein (25739 - 23850)
          Length = 511

 Score = 24.6 bits (52), Expect = 7.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 166 RTAPAGRRHRACPRPRHTAQRLGQTRYVDITVDDTLFTYD 285
           RT P G+   + PRP + A+R  +   V I++   LF  D
Sbjct: 238 RTLPGGQAFSSKPRPGNLARRFEKHGPVVISLLKELFKLD 277



>NCU07532.1 NCU07532.1 predicted protein (35712 - 33691)
          Length = 502

 Score = 24.6 bits (52), Expect = 7.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 183 PPPPGMSSSSTHSTKAWT 236
           PPPP  SSSS+ S  A T
Sbjct: 383 PPPPSSSSSSSSSFSALT 400



  Database: /phillip/Ncr/Ncr_P
    Posted date:  May 20, 2002 12:05 PM
  Number of letters in database: 3,158,374
  Number of sequences in database:  6531
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2086047
Number of Sequences: 6531
Number of extensions: 43463
Number of successful extensions: 189
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of query: 105
length of database: 3,158,374
effective HSP length: 42
effective length of query: 63
effective length of database: 2,884,072
effective search space: 181696536
effective search space used: 181696536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)