BLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/Fgr-S/seq_dir/blast_NcrP/Fgr-S_3_D08_T7.seq
(281 letters)
Database: /phillip/Ncr/Ncr_P
6531 sequences; 3,158,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCU06929.1 NCU06929.1 hypothetical protein (173920 - 177315) 32 0.042
NCU02527.1 NCU02527.1 predicted protein (91084 - 88184) 30 0.21
NCU01431.1 NCU01431.1 hypothetical protein (14764 - 9254) 27 0.24
NCU06565.1 NCU06565.1 predicted protein (80885 - 83441) 29 0.27
NCU00412.1 NCU00412.1 predicted protein (177732 - 175488) 29 0.27
NCU00622.1 NCU00622.1 hypothetical protein (144257 - 148952) 29 0.27
NCU01996.1 NCU01996.1 hypothetical protein (37277 - 35050) 28 0.60
NCU06842.1 NCU06842.1 hypothetical protein (6606 - 9747) 24 0.88
NCU07282.1 NCU07282.1 predicted protein (15741 - 11823) 27 1.0
NCU08420.1 NCU08420.1 predicted protein (8811 - 13535) 27 1.0
NCU01158.1 NCU01158.1 predicted protein (13592 - 10681) 27 1.3
NCU09294.1 NCU09294.1 predicted protein (3037 - 429) 27 1.8
NCU06685.1 NCU06685.1 hypothetical protein (25243 - 21435) 26 2.3
NCU07846.1 NCU07846.1 hypothetical protein (14185 - 12917) 26 2.3
NCU01643.1 NCU01643.1 hypothetical protein (17876 - 14581) 26 3.0
NCU01048.1 NCU01048.1 predicted protein (141137 - 142762) 25 3.9
NCU07878.1 NCU07878.1 predicted protein (11550 - 10336) 25 3.9
NCU00037.1 NCU00037.1 hypothetical protein (130022 - 132446) 25 3.9
NCU07489.1 NCU07489.1 hypothetical protein ( (AF071751) protein ... 25 3.9
NCU07656.1 NCU07656.1 predicted protein (17520 - 16582) 25 5.1
NCU07685.1 NCU07685.1 predicted protein (102080 - 99843) 25 5.1
NCU09922.1 NCU09922.1 hypothetical protein (21132 - 23112) 25 5.1
NCU00234.1 NCU00234.1 predicted protein (40954 - 43270) 25 5.1
NCU01696.1 NCU01696.1 hypothetical protein (85936 - 83253) 25 5.1
NCU00845.1 NCU00845.1 predicted protein (17946 - 19470) 25 5.1
NCU01349.1 NCU01349.1 hypothetical protein (188653 - 192303) 25 5.1
NCU01257.1 NCU01257.1 hypothetical protein (8650 - 7213) 25 5.1
NCU08684.1 NCU08684.1 predicted protein (59798 - 57880) 25 6.7
NCU09449.1 NCU09449.1 hypothetical protein (5874 - 2580) 25 6.7
NCU09576.1 NCU09576.1 hypothetical protein (23691 - 20819) 25 6.7
NCU01341.1 NCU01341.1 hypothetical protein (163103 - 162326) 25 6.7
NCU01334.1 NCU01334.1 hypothetical protein ( (AL451017) hypothet... 24 8.7
NCU00674.1 NCU00674.1 predicted protein (341334 - 344546) 24 8.7
NCU00584.1 NCU00584.1 predicted protein (22726 - 21734) 24 8.7
NCU07180.1 NCU07180.1 predicted protein (110372 - 112138) 24 8.7
NCU08811.1 NCU08811.1 hypothetical protein (55377 - 57190) 24 8.7
NCU08809.1 NCU08809.1 hypothetical protein (51701 - 52918) 24 8.7
>NCU06929.1 NCU06929.1 hypothetical protein (173920 - 177315)
Length = 1054
Score = 32.0 bits (71), Expect = 0.042
Identities = 21/52 (40%), Positives = 23/52 (43%), Gaps = 3/52 (5%)
Frame = +1
Query: 88 PGKGKRAPL*KFSGEKKFYPPNPPGGAFKN---QIPKPGGGLIREPNPGPKL 234
PG G AP SG+ Y P GG + P PGGGL P PG L
Sbjct: 947 PGYGASAPTPGASGDAWGYTPGASGGGNSSSAYDAPTPGGGL-SAPTPGAAL 997
>NCU02527.1 NCU02527.1 predicted protein (91084 - 88184)
Length = 730
Score = 29.6 bits (65), Expect = 0.21
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 54 KKKWGPKPNFSPRKGKKGPPLKIFGGKKILPPQP-PRGGL*KPNSQTRGGVNKGTQPGPK 230
K+K GP+ + G+ ++ G + +P + P GG P K + PK
Sbjct: 162 KEKQGPQADLQKAGGEMTVHQELEKGSQKIPQKSAPMGGQKNPQKSPEKNTQKTQKKSPK 221
Query: 231 VGEKKGKTVPRGK 269
+KKG P K
Sbjct: 222 KKKKKGNPPPETK 234
>NCU01431.1 NCU01431.1 hypothetical protein (14764 - 9254)
Length = 1817
Score = 26.6 bits (57), Expect(2) = 0.24
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 145 PPNPPGGAFKNQIPKPGGGLIREPNPGP 228
PP PPGG P PG G P P P
Sbjct: 1070 PPPPPGGLPGAAPPMPGAGGPPPPPPPP 1097
Score = 21.2 bits (43), Expect(2) = 0.24
Identities = 15/39 (38%), Positives = 16/39 (40%), Gaps = 5/39 (12%)
Frame = +3
Query: 69 PKPNF-----SPRKGKKGPPLKIFGGKKILPPQPPRGGL 170
P P F +P G GPP PP PP GGL
Sbjct: 1042 PPPGFLPGAPAPIPGAGGPPPP---PPPPPPPPPPPGGL 1077
>NCU06565.1 NCU06565.1 predicted protein (80885 - 83441)
Length = 825
Score = 29.3 bits (64), Expect = 0.27
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 85 PPGKGKRAPL*KFSGEKKFYPPNPPGGAFKNQIPKPGGGLIRE---PNPGPKL 234
PP + AP + G+ ++ PP PP + N +P P G PGP L
Sbjct: 150 PPPPSQYAPQPPY-GQPQYPPPYPPSNYYPNGVPPPPPGAYPPQPYSQPGPPL 201
>NCU00412.1 NCU00412.1 predicted protein (177732 - 175488)
Length = 663
Score = 29.3 bits (64), Expect = 0.27
Identities = 16/35 (45%), Positives = 19/35 (53%)
Frame = -1
Query: 227 GPGLGSLINPPPGLGIWFLKAPPGGLGG*NFFSPE 123
G G+ ++PPPGLG PPGG G SPE
Sbjct: 625 GGGIKRPLSPPPGLG------PPGGQQGLPIRSPE 653
>NCU00622.1 NCU00622.1 hypothetical protein (144257 - 148952)
Length = 1491
Score = 29.3 bits (64), Expect = 0.27
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = +3
Query: 78 NFSPRKGKKGPPLKIFGGKKILPPQPPRGGL*KPNSQTRGGVNKGTQPGPKVGEKKGKTV 257
NF PR G GPP ++ L P G P + RG N Q GP+ G G
Sbjct: 487 NFPPRDGSSGPP-----DQRRLVGPPGDAGNTTPQNGFRGPPNPNDQIGPR-GPPNGPPK 540
Query: 258 P 260
P
Sbjct: 541 P 541
>NCU01996.1 NCU01996.1 hypothetical protein (37277 - 35050)
Length = 705
Score = 28.1 bits (61), Expect = 0.60
Identities = 17/52 (32%), Positives = 23/52 (43%)
Frame = +3
Query: 93 KGKKGPPLKIFGGKKILPPQPPRGGL*KPNSQTRGGVNKGTQPGPKVGEKKG 248
+G GPP + +GG PRGG P +GG ++ PG G G
Sbjct: 364 RGGYGPPPRGYGGPG------PRGGRGPPPQGYQGGPDRRPSPGAPYGPGPG 409
>NCU06842.1 NCU06842.1 hypothetical protein (6606 - 9747)
Length = 917
Score = 23.9 bits (50), Expect(2) = 0.88
Identities = 11/28 (39%), Positives = 16/28 (56%)
Frame = +3
Query: 87 PRKGKKGPPLKIFGGKKILPPQPPRGGL 170
P G++G P GG + PP PP+ G+
Sbjct: 643 PPHGEQGGP----GGPEPGPPHPPQSGM 666
Score = 21.9 bits (45), Expect(2) = 0.88
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 145 PPNPPGGAFKNQIPKPGGGLIREPNPGPK 231
PP+PP + P R P+ GPK
Sbjct: 658 PPHPPQSGMAGEPPHQREHDPRPPSVGPK 686
>NCU07282.1 NCU07282.1 predicted protein (15741 - 11823)
Length = 1062
Score = 27.3 bits (59), Expect = 1.0
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +3
Query: 66 GPKPNFSPRKGKKGPPLKIFGGKKILP-PQPPRGGL*KPNSQTRGGVNKGTQPGPKVGEK 242
G +P P LK FG K P P GG +P S T ++ P P+ ++
Sbjct: 938 GTQPGAGP---SASDDLKPFGDSKAASGPSPALGGAARPGSATNNAPSQSGLPPPQSNQQ 994
Query: 243 KG 248
G
Sbjct: 995 SG 996
>NCU08420.1 NCU08420.1 predicted protein (8811 - 13535)
Length = 1574
Score = 27.3 bits (59), Expect = 1.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 156 PRGGL*KPNSQTRGGVNKGTQPGPKVGEKKGKTVP 260
P G + PN GG + G++PG +GE K+ P
Sbjct: 507 PGGYVMTPNHSLSGGAHSGSKPG-SIGESSPKSPP 540
>NCU01158.1 NCU01158.1 predicted protein (13592 - 10681)
Length = 948
Score = 26.9 bits (58), Expect = 1.3
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = -2
Query: 235 PTLGPGWVPLLTPPR 191
P + PGWVP LTP R
Sbjct: 924 PPITPGWVPELTPTR 938
>NCU09294.1 NCU09294.1 predicted protein (3037 - 429)
Length = 615
Score = 26.6 bits (57), Expect = 1.8
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 108 PPLKIFGGKKILPPQPPRGGL*KPNSQTRGGVNKGTQPGPKVGE 239
P K+ GKK+ P GGL N QT + GP G+
Sbjct: 380 PGAKLDAGKKVRLELPAMGGLPTVNDQTSQSPMASSSGGPDGGD 423
>NCU06685.1 NCU06685.1 hypothetical protein (25243 - 21435)
Length = 1229
Score = 26.2 bits (56), Expect = 2.3
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +3
Query: 66 GPKPNFSPRKGKKGPPLKIFGGKKILPPQPPRGGL*KPNSQTRGGVNKGTQPGPKVGEKK 245
GP+ ++ +G PP G P P RGG + RGG + G + G K
Sbjct: 463 GPQAHYHSNQGHS-PPYPPTGPAAQYPTGPFRGGHRAASGGFRGGSFGVARGGHRGGSKN 521
Query: 246 GKTVP-----RGKMVSP 281
+ P RG+ ++P
Sbjct: 522 AQWSPNAHNARGQYITP 538
>NCU07846.1 NCU07846.1 hypothetical protein (14185 - 12917)
Length = 331
Score = 26.2 bits (56), Expect = 2.3
Identities = 17/54 (31%), Positives = 20/54 (36%)
Frame = +1
Query: 61 NGAPNQIFPPGKGKRAPL*KFSGEKKFYPPNPPGGAFKNQIPKPGGGLIREPNP 222
NG P+ G G P +S Y P PP Q P GL +P P
Sbjct: 90 NGVPSSNSMSGPGHAYPHPAYSS----YAPPPPDVTSPYQHSGPSAGLYAQPRP 139
>NCU01643.1 NCU01643.1 hypothetical protein (17876 - 14581)
Length = 1072
Score = 25.8 bits (55), Expect = 3.0
Identities = 11/32 (34%), Positives = 16/32 (49%)
Frame = +3
Query: 69 PKPNFSPRKGKKGPPLKIFGGKKILPPQPPRG 164
P+ ++ P G + PP G + PP PP G
Sbjct: 950 PRDSYGPPPGWQPPPPPGLAGFGVGPPPPPPG 981
>NCU01048.1 NCU01048.1 predicted protein (141137 - 142762)
Length = 541
Score = 25.4 bits (54), Expect = 3.9
Identities = 11/24 (45%), Positives = 13/24 (53%)
Frame = +3
Query: 87 PRKGKKGPPLKIFGGKKILPPQPP 158
PR+ K PPL F + PP PP
Sbjct: 269 PRRSKSPPPLNFFPSR--CPPTPP 290
>NCU07878.1 NCU07878.1 predicted protein (11550 - 10336)
Length = 356
Score = 25.4 bits (54), Expect = 3.9
Identities = 15/34 (44%), Positives = 16/34 (46%), Gaps = 2/34 (5%)
Frame = +1
Query: 157 PGGAFKNQIPKPGG--GLIREPNPGPKLGKKREK 252
PG N PK GG I PN GP G R+K
Sbjct: 85 PGSRSANNTPKSGGLAARITNPNAGP-AGNPRQK 117
>NCU00037.1 NCU00037.1 hypothetical protein (130022 - 132446)
Length = 662
Score = 25.4 bits (54), Expect = 3.9
Identities = 19/52 (36%), Positives = 22/52 (41%), Gaps = 7/52 (13%)
Frame = +1
Query: 130 EKKFYPPNPPGGAFKNQIPKPG---GGLIREPN----PGPKLGKKREKLFPG 264
+K Y P PP G+ +P PG GLI P P P G L PG
Sbjct: 563 KKAGYQPPPPPGSAGAPMPPPGILPPGLIPPPGAAGFPMPPPGFAPPPLIPG 614
Score = 24.3 bits (51), Expect = 8.7
Identities = 14/37 (37%), Positives = 15/37 (39%), Gaps = 7/37 (18%)
Frame = -1
Query: 281 GGNHFSPGNSFSLF-------FPNFGPGLGSLINPPP 192
GG PG SF P+ GPG I PPP
Sbjct: 474 GGGGMMPGLSFPSIPGLPLQQVPSSGPGGSGFIPPPP 510
>NCU07489.1 NCU07489.1 hypothetical protein ( (AF071751) protein
phosphatase-Z-like serine/t
Length = 531
Score = 25.4 bits (54), Expect = 3.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 150 QPPRGGL*KPNSQTRGGVNKGTQPGPKVGEKKGKTV 257
QPP GG GG N QPG + K+ T+
Sbjct: 152 QPPSGG---------GGANSNQQPGQSILVKRENTI 178
>NCU07656.1 NCU07656.1 predicted protein (17520 - 16582)
Length = 312
Score = 25.0 bits (53), Expect = 5.1
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 61 NGAPNQIFPPGKGKRAPL 114
+G P+++FPP K RAP+
Sbjct: 45 DGKPSELFPPYKVPRAPV 62
>NCU07685.1 NCU07685.1 predicted protein (102080 - 99843)
Length = 745
Score = 25.0 bits (53), Expect = 5.1
Identities = 12/28 (42%), Positives = 15/28 (52%)
Frame = -1
Query: 227 GPGLGSLINPPPGLGIWFLKAPPGGLGG 144
GP G + PPPG+G + P G GG
Sbjct: 697 GPPPGFMGPPPPGMGGFQGPDGPAGFGG 724
>NCU09922.1 NCU09922.1 hypothetical protein (21132 - 23112)
Length = 550
Score = 25.0 bits (53), Expect = 5.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 69 PKPNFSPRKGKKGPPLKIFGGKKILPPQPPRGGL*KP 179
P P P +G+ GP + G + P PP+ L +P
Sbjct: 83 PAPRPRPGRGRGGPRVDATGRRLPPGPAPPQSWLNRP 119
>NCU00234.1 NCU00234.1 predicted protein (40954 - 43270)
Length = 690
Score = 25.0 bits (53), Expect = 5.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 90 RKGKKGPPLKIFGG 131
R+G+KGP K+FGG
Sbjct: 268 RQGRKGPEKKMFGG 281
>NCU01696.1 NCU01696.1 hypothetical protein (85936 - 83253)
Length = 817
Score = 25.0 bits (53), Expect = 5.1
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = +3
Query: 69 PKPNFSPRKGKKGPPLKIFGGKKILPP----QPPRG 164
P + P G PL+ G +LPP QPP G
Sbjct: 193 PNGHMPPHGGNTAFPLRPHNGPDVLPPRATTQPPYG 228
>NCU00845.1 NCU00845.1 predicted protein (17946 - 19470)
Length = 447
Score = 25.0 bits (53), Expect = 5.1
Identities = 12/38 (31%), Positives = 18/38 (46%)
Frame = +1
Query: 148 PNPPGGAFKNQIPKPGGGLIREPNPGPKLGKKREKLFP 261
P P F +++P P PGPK+G K ++ P
Sbjct: 139 PGEPVADFLDRLP---------PVPGPKMGGKNDRFVP 167
>NCU01349.1 NCU01349.1 hypothetical protein (188653 - 192303)
Length = 1216
Score = 25.0 bits (53), Expect = 5.1
Identities = 15/43 (34%), Positives = 17/43 (38%)
Frame = -1
Query: 278 GNHFSPGNSFSLFFPNFGPGLGSLINPPPGLGIWFLKAPPGGL 150
GN +P S NF P P P I F+ A P GL
Sbjct: 763 GNPLTPPQDLSREDANFSPLRNPRAPPKPPPAINFIPATPSGL 805
>NCU01257.1 NCU01257.1 hypothetical protein (8650 - 7213)
Length = 436
Score = 25.0 bits (53), Expect = 5.1
Identities = 17/58 (29%), Positives = 25/58 (42%), Gaps = 8/58 (13%)
Frame = +1
Query: 121 FSGEKKFYPPNPP--------GGAFKNQIPKPGGGLIREPNPGPKLGKKREKLFPGEK 270
F G+KK+ N A K + P GG ++ P P+ GK R K G++
Sbjct: 379 FGGKKKYAKSNDALSSGDVSGFSARKMKSGGPAGGKPKKFKPAPRPGKARRKAGAGKR 436
>NCU08684.1 NCU08684.1 predicted protein (59798 - 57880)
Length = 366
Score = 24.6 bits (52), Expect = 6.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 93 KGKKGPPLKIFGGKK 137
KGK GPP +F G+K
Sbjct: 217 KGKSGPPAGMFSGQK 231
>NCU09449.1 NCU09449.1 hypothetical protein (5874 - 2580)
Length = 1059
Score = 24.6 bits (52), Expect = 6.7
Identities = 15/61 (24%), Positives = 21/61 (33%)
Frame = +3
Query: 66 GPKPNFSPRKGKKGPPLKIFGGKKILPPQPPRGGL*KPNSQTRGGVNKGTQPGPKVGEKK 245
GP P P G G + G +P PP P+ Q + + P P +
Sbjct: 277 GPGPGPGPGPGSAGRAPYLQGPPVRVPQTPPISTAHNPHFQRSHSTHSSSTPTPTSAHSQ 336
Query: 246 G 248
G
Sbjct: 337 G 337
>NCU09576.1 NCU09576.1 hypothetical protein (23691 - 20819)
Length = 845
Score = 24.6 bits (52), Expect = 6.7
Identities = 18/53 (33%), Positives = 23/53 (42%)
Frame = +1
Query: 67 APNQIFPPGKGKRAPL*KFSGEKKFYPPNPPGGAFKNQIPKPGGGLIREPNPG 225
AP+ PG G P S PP PP GA + +P G++ P PG
Sbjct: 176 APHHGDQPGSGPSHP--HHSHPHPPPPPPPPTGAPSDVVPP--HGILFPPTPG 224
>NCU01341.1 NCU01341.1 hypothetical protein (163103 - 162326)
Length = 216
Score = 24.6 bits (52), Expect = 6.7
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -1
Query: 224 PGLGSLINPPPGLGIWFLKAPPGGLGG*NFFSPENF---*RGALFPFPGGKIWFGAP 63
PGLG PPPG G+ PGG+ P F GA P PG FGAP
Sbjct: 79 PGLGF---PPPGAGVPPFPPFPGGM-------PPPFPGMPGGAPVPPPGA---FGAP 122
Score = 24.6 bits (52), Expect = 6.7
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = -1
Query: 281 GGNHFSPGNSFSLFFPNFGPGLGSLINPPPGLGIWFLKAPPGGLGG 144
GG F P L FP PG G+ PPPG F PP G G
Sbjct: 166 GGLPFPPPGG--LPFPP--PGAGNFPFPPPGAPGAFPGMPPFGAPG 207
>NCU01334.1 NCU01334.1 hypothetical protein ( (AL451017)
hypothetical protein [Neurospora cr
Length = 415
Score = 24.3 bits (51), Expect = 8.7
Identities = 12/31 (38%), Positives = 15/31 (47%)
Frame = +1
Query: 142 YPPNPPGGAFKNQIPKPGGGLIREPNPGPKL 234
+PPN P N IP P +P PGP +
Sbjct: 150 FPPNNPN----NPIPDPVDPSNPKPKPGPDI 176
>NCU00674.1 NCU00674.1 predicted protein (341334 - 344546)
Length = 960
Score = 24.3 bits (51), Expect = 8.7
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 156 PRGGL*KPNSQTRGGVNKGTQPGPKVGEKKGKTVP 260
P + +++T G KGT+PG + G K P
Sbjct: 584 PSSAMTSRSAETGWGDPKGTRPGVQAGRSKTAPAP 618
>NCU00584.1 NCU00584.1 predicted protein (22726 - 21734)
Length = 330
Score = 24.3 bits (51), Expect = 8.7
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = -1
Query: 254 SFSLFFPNFGPGLGSLINPPPGL 186
S LF +FG G ++++PPP L
Sbjct: 97 SLLLFGVSFGLGFRAIVSPPPPL 119
>NCU07180.1 NCU07180.1 predicted protein (110372 - 112138)
Length = 537
Score = 24.3 bits (51), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 148 PNPPGGAFKNQIPKPGGGLIREPNPG 225
PNP G ++ +P PG I+ PG
Sbjct: 347 PNPTAGTSRSSLPYPGAA-IKTSQPG 371
>NCU08811.1 NCU08811.1 hypothetical protein (55377 - 57190)
Length = 496
Score = 24.3 bits (51), Expect = 8.7
Identities = 11/30 (36%), Positives = 15/30 (49%)
Frame = +1
Query: 157 PGGAFKNQIPKPGGGLIREPNPGPKLGKKR 246
PG + K GGG++ P KLG K+
Sbjct: 232 PGSSTTGGPRKVGGGILGAKKPAAKLGVKK 261
>NCU08809.1 NCU08809.1 hypothetical protein (51701 - 52918)
Length = 381
Score = 24.3 bits (51), Expect = 8.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 153 PPRGGL*KPNSQTRGGVNKGTQPGPKVGEKKGKTVPRGKM 272
P G PN R G + + GPK G+K+ V G++
Sbjct: 217 PTNGAKATPNG--RKGPGRPSTTGPKTGQKRKYNVANGEV 254
Database: /phillip/Ncr/Ncr_P
Posted date: May 20, 2002 12:05 PM
Number of letters in database: 3,158,374
Number of sequences in database: 6531
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2032695
Number of Sequences: 6531
Number of extensions: 68701
Number of successful extensions: 276
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of query: 93
length of database: 3,158,374
effective HSP length: 39
effective length of query: 54
effective length of database: 2,903,665
effective search space: 156797910
effective search space used: 156797910
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)