BLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/Fgr-S/seq_dir/blast_NcrP/Fgr-S_7_H04_T7.seq
(159 letters)
Database: /phillip/Ncr/Ncr_P
6531 sequences; 3,158,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCU08008.1 NCU08008.1 hypothetical protein (132644 - 134600) 30 0.072
NCU06560.1 NCU06560.1 hypothetical protein (71848 - 70356) 29 0.12
NCU07066.1 NCU07066.1 hypothetical protein (21728 - 22945) 28 0.27
NCU08532.1 NCU08532.1 hypothetical protein (10449 - 13055) 27 0.61
NCU07012.1 NCU07012.1 hypothetical protein (17622 - 13911) 27 0.80
NCU00576.1 NCU00576.1 hypothetical protein (115044 - 113560) 26 1.0
NCU06746.1 NCU06746.1 predicted protein (39264 - 38043) 26 1.0
NCU01431.1 NCU01431.1 hypothetical protein (14764 - 9254) 26 1.0
NCU06738.1 NCU06738.1 hypothetical protein (19361 - 15462) 26 1.4
NCU00324.1 NCU00324.1 hypothetical protein (387500 - 384780) 25 1.8
NCU08560.1 NCU08560.1 predicted protein (13643 - 15241) 25 1.8
NCU09869.1 NCU09869.1 hypothetical protein (5373 - 746) 25 2.3
NCU08821.1 NCU08821.1 predicted protein (25319 - 28281) 25 3.0
NCU01665.1 NCU01665.1 hypothetical protein (18087 - 15994) 25 3.0
NCU09099.1 NCU09099.1 predicted protein (103304 - 104155) 25 3.0
NCU09091.1 NCU09091.1 hypothetical protein (80324 - 78553) 25 3.0
NCU07221.1 NCU07221.1 hypothetical protein (225459 - 222682) 25 3.0
NCU01476.1 NCU01476.1 predicted protein (52950 - 50229) 25 3.0
NCU09968.1 NCU09968.1 predicted protein (9849 - 5862) 25 3.0
NCU00311.1 NCU00311.1 hypothetical protein (334740 - 332732) 24 4.0
NCU02070.1 NCU02070.1 hypothetical protein (26582 - 28501) 24 4.0
NCU02234.1 NCU02234.1 hypothetical protein (53330 - 58858) 24 4.0
NCU07503.1 NCU07503.1 predicted protein (94923 - 95915) 24 4.0
NCU09081.1 NCU09081.1 predicted protein (45173 - 45877) 24 5.2
NCU07327.1 NCU07327.1 predicted protein (94063 - 94572) 24 5.2
NCU01643.1 NCU01643.1 hypothetical protein (17876 - 14581) 24 5.2
NCU00472.1 NCU00472.1 hypothetical protein (86478 - 88089) 24 5.2
NCU06411.1 NCU06411.1 predicted protein (20258 - 23773) 24 5.2
NCU08086.1 NCU08086.1 predicted protein (124869 - 124453) 24 5.2
NCU07625.1 NCU07625.1 predicted protein (15161 - 17566) 23 6.8
NCU06799.1 NCU06799.1 hypothetical protein ( hypothetical protei... 23 6.8
NCU01068.1 NCU01068.1 hypothetical protein (198666 - 197149) 23 6.8
NCU07438.1 NCU07438.1 hypothetical protein (47476 - 45433) 23 6.8
NCU00230.1 NCU00230.1 hypothetical protein (25609 - 28350) 23 6.8
NCU01341.1 NCU01341.1 hypothetical protein (163103 - 162326) 23 6.8
NCU01000.1 NCU01000.1 hypothetical protein (24060 - 26078) 23 8.8
NCU06437.1 NCU06437.1 predicted protein (88634 - 92206) 23 8.8
NCU00241.1 NCU00241.1 predicted protein (78229 - 75470) 23 8.8
NCU07493.1 NCU07493.1 predicted protein (60153 - 61397) 23 8.8
NCU01732.1 NCU01732.1 hypothetical protein ( hypothetical protei... 23 8.8
NCU02316.1 NCU02316.1 predicted protein (22980 - 24840) 23 8.8
>NCU08008.1 NCU08008.1 hypothetical protein (132644 - 134600)
Length = 522
Score = 30.0 bits (66), Expect = 0.072
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPPRRLG*F 48
P P G P P P G PP+ K +A P + G F
Sbjct: 262 PAPSGGAPPPPPPPPGPPPVLKINEQKAEPAQPGGF 297
>NCU06560.1 NCU06560.1 hypothetical protein (71848 - 70356)
Length = 477
Score = 29.3 bits (64), Expect = 0.12
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 158 QPPPRAGGKLPAPRPLGTPPITKCCSTEA 72
Q P G++P P+ T P+TK +TEA
Sbjct: 264 QAPTLINGEIPTSTPINTVPVTKIQTTEA 292
>NCU07066.1 NCU07066.1 hypothetical protein (21728 - 22945)
Length = 405
Score = 28.1 bits (61), Expect = 0.27
Identities = 12/31 (38%), Positives = 16/31 (50%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPPR 63
PPP G P P+ L PP++ S+ PR
Sbjct: 37 PPPGRGIVQPTPQRLDKPPLSNSSSSSTGPR 67
>NCU08532.1 NCU08532.1 hypothetical protein (10449 - 13055)
Length = 807
Score = 26.9 bits (58), Expect = 0.61
Identities = 13/28 (46%), Positives = 14/28 (49%), Gaps = 2/28 (7%)
Frame = -2
Query: 158 QPPPRAGGKLPAPRPLGTPP--ITKCCS 81
QP P GK A P+ PP KCCS
Sbjct: 431 QPQPPTDGKAKASTPVDEPPAIALKCCS 458
>NCU07012.1 NCU07012.1 hypothetical protein (17622 - 13911)
Length = 1200
Score = 26.6 bits (57), Expect = 0.80
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPP 66
PPP A P P P PP+ K APP
Sbjct: 108 PPPVASAPPPVPVPAAEPPVPK----PAPP 133
Score = 23.9 bits (50), Expect = 5.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPP 66
PPP+A P P P PP + +PP
Sbjct: 132 PPPQASAP-PPPVPQAVPPPAEAPRVTSPP 160
>NCU00576.1 NCU00576.1 hypothetical protein (115044 - 113560)
Length = 494
Score = 26.2 bits (56), Expect = 1.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPP 66
PPP + A P PP T ST PP
Sbjct: 390 PPPSSSTSTSASTPALAPPSTTTTSTTRPP 419
>NCU06746.1 NCU06746.1 predicted protein (39264 - 38043)
Length = 375
Score = 26.2 bits (56), Expect = 1.0
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 100 GGVPKGRGAGSFPPARGGG 156
GG P G GAG PP GGG
Sbjct: 179 GGAP-GSGAGGMPPFPGGG 196
>NCU01431.1 NCU01431.1 hypothetical protein (14764 - 9254)
Length = 1817
Score = 26.2 bits (56), Expect = 1.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPP 66
P P AGG P P P PP+ PP
Sbjct: 1083 PMPGAGGPPPPPPPPPPPPMPGMAGMPPPP 1112
>NCU06738.1 NCU06738.1 hypothetical protein (19361 - 15462)
Length = 1256
Score = 25.8 bits (55), Expect = 1.4
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 10/41 (24%)
Frame = -2
Query: 155 PPPRAGGKLPAP--RP--------LGTPPITKCCSTEAPPR 63
PPPRAG P P RP G PP + APP+
Sbjct: 1099 PPPRAGFSAPPPASRPPGGGPPPAAGAPPQQQAPPPAAPPK 1139
Score = 23.5 bits (49), Expect = 6.8
Identities = 12/34 (35%), Positives = 16/34 (46%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPPRRLG 54
PPP +G PAP P ++ + PP R G
Sbjct: 1076 PPPASGAYTPAP-----PAASQQYAAAPPPPRAG 1104
>NCU00324.1 NCU00324.1 hypothetical protein (387500 - 384780)
Length = 798
Score = 25.4 bits (54), Expect = 1.8
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = -2
Query: 155 PPPRA--GGKLPAPRPLGT 105
PPP + GKLP PRPL T
Sbjct: 310 PPPSSLLVGKLPPPRPLST 328
>NCU08560.1 NCU08560.1 predicted protein (13643 - 15241)
Length = 481
Score = 25.4 bits (54), Expect = 1.8
Identities = 14/32 (43%), Positives = 17/32 (52%)
Frame = -3
Query: 109 GPPRLLNVALLRPPPEGWGNFGLIIFKSCNSF 14
GPPRLL + LR P + G G+ IF F
Sbjct: 45 GPPRLLQIPYLRIPWQ--GRLGVPIFAFLTGF 74
>NCU09869.1 NCU09869.1 hypothetical protein (5373 - 746)
Length = 1508
Score = 25.0 bits (53), Expect = 2.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPPRRLG 54
PP R+G ++ TPP+++ + + PP R G
Sbjct: 215 PPSRSGTQIDQQG--ATPPLSRSATFDKPPSRSG 246
>NCU08821.1 NCU08821.1 predicted protein (25319 - 28281)
Length = 915
Score = 24.6 bits (52), Expect = 3.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 69 PPKAGVILALLFLKAVIVLVM 7
PP GV+L L+ L + VLV+
Sbjct: 525 PPVLGVVLGLMLLTIIAVLVL 545
>NCU01665.1 NCU01665.1 hypothetical protein (18087 - 15994)
Length = 523
Score = 24.6 bits (52), Expect = 3.0
Identities = 11/30 (36%), Positives = 12/30 (39%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPP 66
PPP P P P G PP + PP
Sbjct: 490 PPPPPSSAAPPPPPPGAPPGMSGGYSAVPP 519
>NCU09099.1 NCU09099.1 predicted protein (103304 - 104155)
Length = 283
Score = 24.6 bits (52), Expect = 3.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPP 66
PPP + G P P PP + + PP
Sbjct: 110 PPPASSGSPPPPPQSSVPPASSGGPSAPPP 139
Score = 24.3 bits (51), Expect = 4.0
Identities = 11/30 (36%), Positives = 12/30 (39%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPP 66
PPP A P P P + P APP
Sbjct: 109 PPPPASSGSPPPPPQSSVPPASSGGPSAPP 138
Score = 23.5 bits (49), Expect = 6.8
Identities = 12/34 (35%), Positives = 16/34 (46%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPPRRLG 54
PP +GG P P +PP + + APP G
Sbjct: 127 PPASSGGPSAPPPPPPSPPASS-SAPSAPPASSG 159
>NCU09091.1 NCU09091.1 hypothetical protein (80324 - 78553)
Length = 547
Score = 24.6 bits (52), Expect = 3.0
Identities = 11/28 (39%), Positives = 14/28 (49%)
Frame = -2
Query: 143 AGGKLPAPRPLGTPPITKCCSTEAPPRR 60
AGG PR + T+ ST PP+R
Sbjct: 49 AGGSTRPPRQPSSSTTTRSLSTATPPKR 76
>NCU07221.1 NCU07221.1 hypothetical protein (225459 - 222682)
Length = 925
Score = 24.6 bits (52), Expect = 3.0
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +1
Query: 46 QNYPSLRGGASVEQHLVIGGVPKGRGAGSFPPARGG 153
Q P L +Q L GG +G G PP G
Sbjct: 882 QGAPMLSDAQQGKQELPNGGFAEGEGLNQLPPVSDG 917
>NCU01476.1 NCU01476.1 predicted protein (52950 - 50229)
Length = 811
Score = 24.6 bits (52), Expect = 3.0
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGT 105
PPP A +P P PL T
Sbjct: 311 PPPEATSPIPRPTPLST 327
>NCU09968.1 NCU09968.1 predicted protein (9849 - 5862)
Length = 1206
Score = 24.6 bits (52), Expect = 3.0
Identities = 12/34 (35%), Positives = 15/34 (43%)
Frame = -2
Query: 158 QPPPRAGGKLPAPRPLGTPPITKCCSTEAPPRRL 57
+P P P P PL P I +T P R+L
Sbjct: 1033 RPSPHQSPVKPLPIPLPIPAINAPVATSTPQRQL 1066
>NCU00311.1 NCU00311.1 hypothetical protein (334740 - 332732)
Length = 610
Score = 24.3 bits (51), Expect = 4.0
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = -2
Query: 158 QPPPRAGGKLPAPRP 114
QPPP AGG L +PRP
Sbjct: 294 QPPPSAGG-LRSPRP 307
>NCU02070.1 NCU02070.1 hypothetical protein (26582 - 28501)
Length = 639
Score = 24.3 bits (51), Expect = 4.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPP 66
PPP A PAP P P T +PP
Sbjct: 11 PPPSAPAPAPAPAP-SPAPAAVAAPTVSPP 39
>NCU02234.1 NCU02234.1 hypothetical protein (53330 - 58858)
Length = 1786
Score = 24.3 bits (51), Expect = 4.0
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 151 PPGQVENSQLLALWGPPRLLNVALLRPPPEGWGNFGL 41
PP + + WG P A PPP GN GL
Sbjct: 79 PPSALGAAPWHGAWGRPYNGQTAFNLPPPPPGGNGGL 115
>NCU07503.1 NCU07503.1 predicted protein (94923 - 95915)
Length = 170
Score = 24.3 bits (51), Expect = 4.0
Identities = 13/29 (44%), Positives = 17/29 (57%)
Frame = +1
Query: 46 QNYPSLRGGASVEQHLVIGGVPKGRGAGS 132
+NY + RGGA E+H+ P G G GS
Sbjct: 80 ENYHTGRGGAGNERHV----SPAGTGNGS 104
>NCU09081.1 NCU09081.1 predicted protein (45173 - 45877)
Length = 234
Score = 23.9 bits (50), Expect = 5.2
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = -2
Query: 128 PAPRPLGTPPITKCCSTEAPP 66
P P PL +PP T + APP
Sbjct: 195 PPPPPLPSPPPTPPAAMPAPP 215
>NCU07327.1 NCU07327.1 predicted protein (94063 - 94572)
Length = 169
Score = 23.9 bits (50), Expect = 5.2
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 152 PPRAGGKLPAPRPLGTPPITKCCSTEAPPRRLG 54
P + G + PR + T + S+ +PP R G
Sbjct: 48 PTNSAGTVATPRTITTSSSNQASSSSSPPGREG 80
>NCU01643.1 NCU01643.1 hypothetical protein (17876 - 14581)
Length = 1072
Score = 23.9 bits (50), Expect = 5.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 100 GGVPKGRGAGSFPPARGG 153
GG P G G G + +RGG
Sbjct: 985 GGAPGGAGYGGYGSSRGG 1002
>NCU00472.1 NCU00472.1 hypothetical protein (86478 - 88089)
Length = 490
Score = 23.9 bits (50), Expect = 5.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 158 QPPPRAGGKLPAPRPLGTPPITKCCST 78
QPPPR G A +PL P TK +T
Sbjct: 106 QPPPRPAGVHNAEQPL--PTYTKMMAT 130
>NCU06411.1 NCU06411.1 predicted protein (20258 - 23773)
Length = 1101
Score = 23.9 bits (50), Expect = 5.2
Identities = 11/29 (37%), Positives = 17/29 (57%)
Frame = +1
Query: 46 QNYPSLRGGASVEQHLVIGGVPKGRGAGS 132
QNYP+ + GA + + GG P G +G+
Sbjct: 428 QNYPNQQYGAGMGGSMHNGGFPGGSVSGA 456
>NCU08086.1 NCU08086.1 predicted protein (124869 - 124453)
Length = 138
Score = 23.9 bits (50), Expect = 5.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 43 GQNYPSLRGGASVEQHLVIGGVPKGRGAGSFPPARGGG 156
G N +GG E+H+ G G G+G GGG
Sbjct: 91 GGNSGGQQGGGLAEEHVGGGHGESGHGSGGGGGNGGGG 128
>NCU07625.1 NCU07625.1 predicted protein (15161 - 17566)
Length = 677
Score = 23.5 bits (49), Expect = 6.8
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITK 90
P PR L PRP+ PP+ +
Sbjct: 309 PAPRPVSWLHVPRPVSWPPVPR 330
>NCU06799.1 NCU06799.1 hypothetical protein ( hypothetical protein
B14D6.340 [imported] - Ne
Length = 1176
Score = 23.5 bits (49), Expect = 6.8
Identities = 14/39 (35%), Positives = 15/39 (37%), Gaps = 8/39 (20%)
Frame = -1
Query: 150 PPGRWKTPSSSPFGDPPDY*MLLY--------*GPPPKA 58
PP W P+S P PP Y GPPP A
Sbjct: 1005 PPASWGHPTSGPTLPPPQQARSPYIPPHAHHPQGPPPPA 1043
Score = 23.1 bits (48), Expect = 8.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPI 96
PPP LP+ P GTP I
Sbjct: 1040 PPPAQPPTLPSISPAGTPRI 1059
>NCU01068.1 NCU01068.1 hypothetical protein (198666 - 197149)
Length = 465
Score = 23.5 bits (49), Expect = 6.8
Identities = 12/28 (42%), Positives = 17/28 (59%)
Frame = +1
Query: 58 SLRGGASVEQHLVIGGVPKGRGAGSFPP 141
S GG ++E+ IGG G G+G+ PP
Sbjct: 331 SFLGGTNLERER-IGGRISGTGSGTTPP 357
>NCU07438.1 NCU07438.1 hypothetical protein (47476 - 45433)
Length = 636
Score = 23.5 bits (49), Expect = 6.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPI 96
PPP GG P P P PP+
Sbjct: 528 PPPPPGGMPPPPAP-ALPPV 546
>NCU00230.1 NCU00230.1 hypothetical protein (25609 - 28350)
Length = 772
Score = 23.5 bits (49), Expect = 6.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTPPITKCCSTEAPPRRL 57
PP A + P PP +C S + PP+RL
Sbjct: 83 PPLIASSVVLKPITRTLPPPHQCPSQQLPPQRL 115
>NCU01341.1 NCU01341.1 hypothetical protein (163103 - 162326)
Length = 216
Score = 23.5 bits (49), Expect = 6.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 155 PPPRAGGKLPAPRPLGTP 102
PPP A G P P G P
Sbjct: 189 PPPGAPGAFPGMPPFGAP 206
>NCU01000.1 NCU01000.1 hypothetical protein (24060 - 26078)
Length = 595
Score = 23.1 bits (48), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = -3
Query: 130 SQLLALWGPPRLLNVALLRPPP 65
SQ + GPPRLL++ P P
Sbjct: 5 SQPRTIHGPPRLLDIQTTVPDP 26
>NCU06437.1 NCU06437.1 predicted protein (88634 - 92206)
Length = 1167
Score = 23.1 bits (48), Expect = 8.8
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = -2
Query: 155 PPPRAGGKLPAP-----RPLGTPPITKCCSTEAPP 66
PPP + L P RPL P + CS PP
Sbjct: 844 PPPFSRPNLSGPATGAYRPLTFSPPCELCSVPIPP 878
>NCU00241.1 NCU00241.1 predicted protein (78229 - 75470)
Length = 919
Score = 23.1 bits (48), Expect = 8.8
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = -2
Query: 128 PAPRPLGTPPITKCCSTEAPPRR 60
P P P G P T S+ PPR+
Sbjct: 7 PPPPPHGKNPKTSAGSSALPPRK 29
>NCU07493.1 NCU07493.1 predicted protein (60153 - 61397)
Length = 414
Score = 23.1 bits (48), Expect = 8.8
Identities = 13/36 (36%), Positives = 18/36 (49%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 YPSLRGGASVEQHLVIGGVP-KGRGAGSFPPARGGG 156
+ +L GA + L + KG GAG+ P GGG
Sbjct: 91 HKTLPAGARDARRLAAAPIAGKGAGAGAVAPLGGGG 126
>NCU01732.1 NCU01732.1 hypothetical protein ( hypothetical protein
B24H17.180 [imported] - N
Length = 252
Score = 23.1 bits (48), Expect = 8.8
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 146 RAGGKLPAPRPLGTP 102
RAG +LP+ RP+ TP
Sbjct: 211 RAGSELPSGRPVVTP 225
>NCU02316.1 NCU02316.1 predicted protein (22980 - 24840)
Length = 509
Score = 23.1 bits (48), Expect = 8.8
Identities = 11/28 (39%), Positives = 14/28 (49%)
Frame = +1
Query: 58 SLRGGASVEQHLVIGGVPKGRGAGSFPP 141
++ GAS E G P G +GS PP
Sbjct: 321 AMTNGASKEGERERGSSPNGNSSGSPPP 348
Database: /phillip/Ncr/Ncr_P
Posted date: May 20, 2002 12:05 PM
Number of letters in database: 3,158,374
Number of sequences in database: 6531
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1648538
Number of Sequences: 6531
Number of extensions: 46267
Number of successful extensions: 256
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of query: 53
length of database: 3,158,374
effective HSP length: 28
effective length of query: 24
effective length of database: 2,975,506
effective search space: 71412144
effective search space used: 71412144
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)