BLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/Fgr-S/seq_dir/blast_NcrP/Fgr-S_8_C03_T7.seq
(627 letters)
Database: /phillip/Ncr/Ncr_P
6531 sequences; 3,158,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCU09212.1 NCU09212.1 hypothetical protein (88362 - 90728) 36 0.009
NCU01187.1 NCU01187.1 hypothetical protein ( (X91867) CPC3 prote... 34 0.034
NCU07580.1 NCU07580.1 hypothetical protein ( (AF116453) cyclin-d... 33 0.057
NCU00772.1 NCU00772.1 hypothetical protein (27691 - 30339) 30 0.37
NCU09778.1 NCU09778.1 CELL DIVISION CONTROL PROTEIN 2 (CYCLIN-DE... 28 1.4
NCU02485.1 NCU02485.1 hypothetical protein (75818 - 77922) 28 1.8
NCU00914.1 NCU00914.1 hypothetical protein (238 - 3858) 28 1.8
NCU09258.1 NCU09258.1 hypothetical protein (69602 - 72704) 28 2.4
NCU00188.1 NCU00188.1 hypothetical protein (50457 - 47549) 28 2.4
NCU09071.1 NCU09071.1 hypothetical protein (5330 - 7543) 27 3.1
NCU02751.1 NCU02751.1 hypothetical protein (1060 - 4984) 27 5.4
NCU02199.1 NCU02199.1 predicted protein (42834 - 43784) 27 5.4
NCU09123.1 NCU09123.1 hypothetical protein (16592 - 19351) 27 5.4
NCU09781.1 NCU09781.1 hypothetical protein (8544 - 9635) 26 7.0
NCU06579.1 NCU06579.1 hypothetical protein (16918 - 12107) 26 9.1
NCU00960.1 NCU00960.1 predicted protein (62400 - 61573) 26 9.1
NCU08087.1 NCU08087.1 hypothetical protein (129193 - 128197) 26 9.1
NCU01168.1 NCU01168.1 hypothetical protein (40713 - 45600) 26 9.1
NCU00550.1 NCU00550.1 predicted protein (22982 - 19001) 26 9.1
>NCU09212.1 NCU09212.1 hypothetical protein (88362 - 90728)
Length = 612
Score = 35.8 bits (81), Expect = 0.009
Identities = 22/83 (26%), Positives = 41/83 (48%), Gaps = 6/83 (7%)
Frame = +2
Query: 377 KLGEGGFGSVYRGFIKDL-----KLDVAIXXXXXXXXXXXXEYISEVRIISRLRHHNLVQ 541
K+G+G F +VYR +DL ++ + + + EV+I+ +L H N+++
Sbjct: 141 KMGDGAFSNVYRA--RDLEGNAGEVAIKVVRKFEMNNMQRANILKEVQIMRQLDHPNIIK 198
Query: 542 LIGWCHGAG-ELLVYELMPGGSL 607
L+ + ++ EL PGG L
Sbjct: 199 LVDFAESRQYYYIILELAPGGEL 221
>NCU01187.1 NCU01187.1 hypothetical protein ( (X91867) CPC3 protein
[Neurospora crassa] ) (
Length = 1646
Score = 33.9 bits (76), Expect = 0.034
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +2
Query: 302 SKGTGPKRFRYNELAVATGNFADRGKLGEGGFGSVYRGFIKDLKLDVAIXXXXXXXXXXX 481
S GP RY + ++ + +LG+GGFG V R AI
Sbjct: 583 SMSRGPMSSRYRQ------DYVEEARLGKGGFGEVVRARKMIDGHLYAIKKITQRSQETL 636
Query: 482 XEYISEVRIISRLRHHNLVQ 541
E + EVR++S++ H +V+
Sbjct: 637 SEILKEVRLLSQMNHPAVVR 656
>NCU07580.1 NCU07580.1 hypothetical protein ( (AF116453)
cyclin-dependent protein kinase PHO
Length = 337
Score = 33.1 bits (74), Expect = 0.057
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 359 NFADRGKLGEGGFGSVYRGFIKDLKLDVAIXXXXXXXXXXX-XEYISEVRIISRLRHHNL 535
+F KLGEG + +V++G + VA+ I E+ ++ L+H N+
Sbjct: 9 SFQQLEKLGEGTYATVFKGRNRQTGELVALKEIHLDSEEGTPSTAIREISLMKELKHENI 68
Query: 536 VQLIGWCHGAGEL-LVYELMPG 598
V L H +L LV+E M G
Sbjct: 69 VALHDVIHTENKLMLVFEYMDG 90
>NCU00772.1 NCU00772.1 hypothetical protein (27691 - 30339)
Length = 809
Score = 30.4 bits (67), Expect = 0.37
Identities = 24/77 (31%), Positives = 34/77 (43%), Gaps = 2/77 (2%)
Frame = +2
Query: 380 LGEGGFGSVYRGFIKDLKLDVAIXXXXXXXXXXXXE-YISEVRIISRLRHHNLVQLIG-W 553
+G G FG V++G K VAI E I E+ I+S L+ + + G +
Sbjct: 25 IGGGSFGKVFKGVDKRSGQAVAIKVIDIESAEDEVEDIIQEIAILSELQSPYVTKYYGSY 84
Query: 554 CHGAGELLVYELMPGGS 604
GA +V E GGS
Sbjct: 85 AKGAELWIVMEFCSGGS 101
>NCU09778.1 NCU09778.1 CELL DIVISION CONTROL PROTEIN 2
(CYCLIN-DEPENDENT PROTEIN KINASE) (26
Length = 328
Score = 28.5 bits (62), Expect = 1.4
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +2
Query: 359 NFADRGKLGEGGFGSVYRGFIKDLKLDVAIXXXXXXXXXXXXE-----YISEVRIISRLR 523
N+ K+GEG +G VY+ +DL I E I E+ ++ +R
Sbjct: 3 NYQKLEKIGEGTYGVVYKA--RDLANSGRIVALKKIRLEAEDEGVPSTAIREISLLKEMR 60
Query: 524 HHNLVQLIGWCHGAG 568
N+V+L+ H G
Sbjct: 61 DPNIVRLLNIVHADG 75
>NCU02485.1 NCU02485.1 hypothetical protein (75818 - 77922)
Length = 677
Score = 28.1 bits (61), Expect = 1.8
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 29/129 (22%)
Frame = -1
Query: 600 PPGINSYTR---SSPAPWHQPMSCTRLWCRSRLMILTSEIYSFLPRFELLDTL------F 448
PP + TR S P H P++ T WC S+ + ++ + P+ ++LD + F
Sbjct: 6 PPSTLTSTREAYSGAPPGHVPLNNTFNWCFSQPFLSAND---YTPQAQVLDKIEDERPIF 62
Query: 447 IATSSFKSL--------------------MNPLYTEPKPPSPSFPLSAKLPVATASSL*R 328
+ +S + L +NP PP+P+ P ++P L
Sbjct: 63 VDNASDRKLTYGQMRSDALALAAGLLSLGLNPSDIIKLPPTPTCPQGPEIPPVVLIQL-P 121
Query: 327 NRLGPVPLL 301
N L P+L
Sbjct: 122 NSLAFAPVL 130
>NCU00914.1 NCU00914.1 hypothetical protein (238 - 3858)
Length = 1168
Score = 28.1 bits (61), Expect = 1.8
Identities = 19/67 (28%), Positives = 31/67 (45%), Gaps = 4/67 (5%)
Frame = +2
Query: 356 GNFADRGKLGEGGFGSVYRGFIKDLKLDVAIXXXXXXXX----XXXXEYISEVRIISRLR 523
G + +GEG FG V G+ ++ + VAI + + EV I+ +L
Sbjct: 305 GEYILGNTIGEGEFGKVKLGWKQEGGVQVAIKLIKKDTVGNNPSRMAKIMREVAILKQLT 364
Query: 524 HHNLVQL 544
H N+V+L
Sbjct: 365 HPNIVRL 371
>NCU09258.1 NCU09258.1 hypothetical protein (69602 - 72704)
Length = 1016
Score = 27.7 bits (60), Expect = 2.4
Identities = 24/78 (30%), Positives = 34/78 (42%), Gaps = 2/78 (2%)
Frame = +2
Query: 380 LGEGGFGSVYRG-FIKDLKLDVAIXXXXXXXXXXXXEYISEVRIISRLRHHNLVQL-IGW 553
LG+GGF Y G I K ++ +E++I S++RH N+VQ +
Sbjct: 64 LGKGGFAICYDGKLIGSSKRYALKIVKAQMASKMEQKFQTELQIHSKMRHVNIVQFHRAF 123
Query: 554 CHGAGELLVYELMPGGSL 607
LV EL GSL
Sbjct: 124 TFENCTYLVLELCSNGSL 141
>NCU00188.1 NCU00188.1 hypothetical protein (50457 - 47549)
Length = 932
Score = 27.7 bits (60), Expect = 2.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 350 ATGNFADRGKLGEGGFGSVYRGFIKDLKLDVAIXXXXXXXXXXXXE--YISEVRIISRLR 523
A G+F ++G+G F VY G K VA+ + E++I+ LR
Sbjct: 20 AIGSFVIDQEIGKGSFAKVYLGRHKVTGALVAVKSVELARLNKKLKENLYGEIQILKTLR 79
Query: 524 HHNLVQL 544
H ++V L
Sbjct: 80 HPHIVAL 86
>NCU09071.1 NCU09071.1 hypothetical protein (5330 - 7543)
Length = 701
Score = 27.3 bits (59), Expect = 3.1
Identities = 25/101 (24%), Positives = 43/101 (41%), Gaps = 4/101 (3%)
Frame = +2
Query: 329 RYNELAVATGNFADRGKLGEGGFGSVYRGFIKDLKLDVAIXXXXXXXXXXXXE---YISE 499
R + + G+F ++G+GG+G V+ KD K A+ E ++E
Sbjct: 288 RKRRVRLRQGDFQILTQVGQGGYGQVFLAQKKDTKEVCALKVMSKKLLFKLDEVRHVLTE 347
Query: 500 VRIISRLRHHNLVQLI-GWCHGAGELLVYELMPGGSLDTHL 619
I++ + LV+L+ + L E +PGG T L
Sbjct: 348 RDILTTAKSDWLVRLLYSFQDDKNIYLAMEYVPGGDFRTLL 388
>NCU02751.1 NCU02751.1 hypothetical protein (1060 - 4984)
Length = 1158
Score = 26.6 bits (57), Expect = 5.4
Identities = 19/75 (25%), Positives = 33/75 (43%), Gaps = 18/75 (24%)
Frame = +2
Query: 371 RGKLGEGGFGSVY------------------RGFIKDLKLDVAIXXXXXXXXXXXXEYIS 496
+GK+G+G F +VY R F+K+ LD+ + +
Sbjct: 264 KGKIGQGAFATVYMVTDKMNGRPYAAKELEKRRFMKNGVLDLKVE--------------N 309
Query: 497 EVRIISRLRHHNLVQ 541
E++I+ R+ H N+VQ
Sbjct: 310 EMKIMQRVSHPNIVQ 324
>NCU02199.1 NCU02199.1 predicted protein (42834 - 43784)
Length = 260
Score = 26.6 bits (57), Expect = 5.4
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = -1
Query: 504 LTSEIYSFLPRFELLDTLFIATSSFKSLMNPLYTEPKPPSPSFPLSAKLPVATASSL*RN 325
+TS + + +P L + T S + P PPSP P+ LP+ N
Sbjct: 70 VTSGVSNIIPNIPLPSSSSAGTQQQPSPVPPSSPSHGPPSPQSPVQNALPIP------YN 123
Query: 324 RLGPVPLLN 298
PVP L+
Sbjct: 124 CASPVPGLS 132
>NCU09123.1 NCU09123.1 hypothetical protein (16592 - 19351)
Length = 574
Score = 26.6 bits (57), Expect = 5.4
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 491 ISEVRIISRLRHHNLVQLIGWCHGAGE-LLVYELMPGGSL 607
+ E+ ++ RL+H ++V+ + W + +V +L GG L
Sbjct: 226 LDELEMLQRLKHPHIVKFVDWFESRDKYYIVTQLATGGEL 265
>NCU09781.1 NCU09781.1 hypothetical protein (8544 - 9635)
Length = 363
Score = 26.2 bits (56), Expect = 7.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 290 PFPHHRTSLLPSPRSFHSAGA*KPIPR 210
P P +T L+P P S G KP PR
Sbjct: 273 PIPRPQTPLVPVPNSDDGEGDSKPAPR 299
>NCU06579.1 NCU06579.1 hypothetical protein (16918 - 12107)
Length = 1555
Score = 25.8 bits (55), Expect = 9.1
Identities = 17/72 (23%), Positives = 32/72 (43%)
Frame = -1
Query: 567 PAPWHQPMSCTRLWCRSRLMILTSEIYSFLPRFELLDTLFIATSSFKSLMNPLYTEPKPP 388
PAP P+S +++ I +S P E++ L+ + +++PL + P P
Sbjct: 1226 PAPTKIPISPNS---PTKISISPGSGFSVSPGAEVVPPLYSSRQKESPIVSPLASSPCTP 1282
Query: 387 SPSFPLSAKLPV 352
S+ LP+
Sbjct: 1283 PDKKAFSSSLPI 1294
>NCU00960.1 NCU00960.1 predicted protein (62400 - 61573)
Length = 207
Score = 25.8 bits (55), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 456 TLFIATSSFKSLMNPLYTEPKPPSPSFPL 370
TL S +L P+Y EP PSP + L
Sbjct: 5 TLVFNFLSSTTLATPVYVEPSAPSPVYTL 33
>NCU08087.1 NCU08087.1 hypothetical protein (129193 - 128197)
Length = 314
Score = 25.8 bits (55), Expect = 9.1
Identities = 16/75 (21%), Positives = 30/75 (39%), Gaps = 2/75 (2%)
Frame = +2
Query: 383 GEGGFGSVYRGFIKDLKL--DVAIXXXXXXXXXXXXEYISEVRIISRLRHHNLVQLIGWC 556
G G +Y G+ D++ ++ + Y S++ S H L++ +
Sbjct: 45 GMRGRNGIYWGWNPDVENGDNITMINRATGHQATTVSYFSQINSPSGFDGHQLLRHLDEV 104
Query: 557 HGAGELLVYELMPGG 601
G G L+ +MP G
Sbjct: 105 KGTGAALIASVMPNG 119
>NCU01168.1 NCU01168.1 hypothetical protein (40713 - 45600)
Length = 1425
Score = 25.8 bits (55), Expect = 9.1
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 263 LPSPRSFHSAGA-*KPIPRCLGRPTTRLNRQPQT 165
+P PRS+HSA A KP PT + N +P T
Sbjct: 1067 VPEPRSYHSAVATDKPRNFNKASPTKKSNSRPDT 1100
>NCU00550.1 NCU00550.1 predicted protein (22982 - 19001)
Length = 1213
Score = 25.8 bits (55), Expect = 9.1
Identities = 14/37 (37%), Positives = 18/37 (47%)
Frame = -1
Query: 447 IATSSFKSLMNPLYTEPKPPSPSFPLSAKLPVATASS 337
+A + K+ P KPPS P +A PVA A S
Sbjct: 460 MAAKAEKAAKPPAAPASKPPSAPAPKTAPAPVAMAQS 496
Database: /phillip/Ncr/Ncr_P
Posted date: May 20, 2002 12:05 PM
Number of letters in database: 3,158,374
Number of sequences in database: 6531
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3970681
Number of Sequences: 6531
Number of extensions: 95732
Number of successful extensions: 381
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of query: 209
length of database: 3,158,374
effective HSP length: 42
effective length of query: 166
effective length of database: 2,884,072
effective search space: 478755952
effective search space used: 478755952
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)