BLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/Fgr-S/seq_dir/blast_NcrP/Fgr-S_9_C02_T7.seq
(606 letters)
Database: /phillip/Ncr/Ncr_P
6531 sequences; 3,158,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCU00420.1 NCU00420.1 predicted protein (1957 - 3663) 36 0.008
NCU01083.1 NCU01083.1 hypothetical protein ( (AF151380) S-adenos... 35 0.011
NCU06862.1 NCU06862.1 predicted protein (16576 - 14426) 32 0.12
NCU01185.1 NCU01185.1 hypothetical protein (96469 - 95303) 31 0.21
NCU09764.1 NCU09764.1 hypothetical protein (968 - 2248) 31 0.27
NCU08919.1 NCU08919.1 hypothetical protein (51728 - 44999) 30 0.36
NCU07308.1 NCU07308.1 hypothetical protein (23233 - 28953) 30 0.61
NCU09216.1 NCU09216.1 hypothetical protein (107898 - 108941) 30 0.61
NCU02068.1 NCU02068.1 predicted protein (12808 - 18781) 29 1.0
NCU02052.1 NCU02052.1 hypothetical protein (3192 - 8804) 29 1.0
NCU07525.1 NCU07525.1 predicted protein (13151 - 10052) 28 1.4
NCU01542.1 NCU01542.1 hypothetical protein (10929 - 15005) 28 1.4
NCU08600.1 NCU08600.1 predicted protein (14412 - 19583) 28 1.8
NCU07116.1 NCU07116.1 predicted protein (73936 - 80307) 28 1.8
NCU06832.1 NCU06832.1 hypothetical protein ( kinesin-like protei... 28 1.8
NCU09142.1 NCU09142.1 hypothetical protein (76040 - 73882) 28 1.8
NCU08982.1 NCU08982.1 predicted protein (35769 - 34659) 28 2.3
NCU09063.1 NCU09063.1 hypothetical protein (54833 - 59969) 27 3.0
NCU01846.1 NCU01846.1 predicted protein (2454 - 1150) 27 3.0
NCU01214.1 NCU01214.1 hypothetical protein (196456 - 198606) 27 3.0
NCU08486.1 NCU08486.1 hypothetical protein ( hypothetical protei... 27 3.9
NCU01597.1 NCU01597.1 hypothetical protein (32055 - 23542) 27 3.9
NCU06438.1 NCU06438.1 hypothetical protein (95424 - 92836) 27 3.9
NCU06376.1 NCU06376.1 predicted protein (137542 - 135719) 27 5.1
NCU09104.1 NCU09104.1 hypothetical protein (122932 - 115837) 27 5.1
NCU08518.1 NCU08518.1 hypothetical protein (20240 - 21646) 27 5.1
NCU02065.1 NCU02065.1 hypothetical protein (2000 - 4849) 27 5.1
NCU08086.1 NCU08086.1 predicted protein (124869 - 124453) 26 8.8
NCU09346.1 NCU09346.1 predicted protein (26004 - 33136) 26 8.8
NCU00394.1 NCU00394.1 predicted protein (115555 - 114086) 26 8.8
NCU07086.1 NCU07086.1 predicted protein (101432 - 103536) 26 8.8
NCU09449.1 NCU09449.1 hypothetical protein (5874 - 2580) 26 8.8
NCU07183.1 NCU07183.1 predicted protein (120538 - 119634) 26 8.8
NCU06339.1 NCU06339.1 predicted protein (19631 - 21692) 26 8.8
NCU02089.1 NCU02089.1 hypothetical protein (19992 - 22376) 26 8.8
>NCU00420.1 NCU00420.1 predicted protein (1957 - 3663)
Length = 522
Score = 35.8 bits (81), Expect = 0.008
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = -2
Query: 452 AATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSL-PGRPGPSSTASRP 276
AA+P P R + +A T S S+ ++ T A+P S P P P S + P
Sbjct: 8 AASPAPHDRPNYGSDVSANTAASASTSSPSAQRTAAVPPPPPPSSSNPNAPAPRSGSGSP 67
Query: 275 RVCTATLWSRKASSPTSSH---GGRRRILWKR 189
R AT + K+S P++S G RI+ K+
Sbjct: 68 RAVGATPAAHKSSPPSASRSAGGSAPRIIVKK 99
>NCU01083.1 NCU01083.1 hypothetical protein ( (AF151380)
S-adenosylmethionine decarboxylase
Length = 503
Score = 35.4 bits (80), Expect = 0.011
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 606 IHVTPEDGFSYASYEVM---GMDASALAYGDIVKRVLRCFGPSEFSAAVTIFGGRGHAAT 436
+HVTPE S+AS+E G + A +++++V+ F P FS VT+F +G AT
Sbjct: 384 VHVTPEPQCSFASFETNVPGGQNGRQTA--EVIEQVVNIFRPGRFS--VTLFEAKGALAT 439
>NCU06862.1 NCU06862.1 predicted protein (16576 - 14426)
Length = 686
Score = 32.0 bits (71), Expect = 0.12
Identities = 28/81 (34%), Positives = 37/81 (45%)
Frame = -2
Query: 455 AAATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRP 276
A+ PPP R ST + ++ SRSS ++ +SST T+ P P S+ SRP
Sbjct: 382 ASKKPPPPPRRST-HGRSENSIRSRSSSLKVASST-----TQVNAPAPPPPRRSTHGSRP 435
Query: 275 RVCTATLWSRKASSPTSSHGG 213
TA L T S GG
Sbjct: 436 STSTAGLGIGITLPATPSAGG 456
>NCU01185.1 NCU01185.1 hypothetical protein (96469 - 95303)
Length = 353
Score = 31.2 bits (69), Expect = 0.21
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = -2
Query: 434 GARSSTPRHTTATTLWSRS-------SPVEASSSTRALP*TKRLLSLPGRPGPSSTASRP 276
G R+S + ++W RS S A ++ L LL G P PSST
Sbjct: 169 GRRASVAQGRALLSIWDRSLSSSLPPSSTSAEAAAAILKPFSALLRSAGAPPPSSTT--- 225
Query: 275 RVCTATLWSRKASSPTSSHGGR 210
T + +S+P++S GGR
Sbjct: 226 -----TTTTSSSSNPSTSGGGR 242
>NCU09764.1 NCU09764.1 hypothetical protein (968 - 2248)
Length = 405
Score = 30.8 bits (68), Expect = 0.27
Identities = 23/80 (28%), Positives = 38/80 (46%)
Frame = -2
Query: 455 AAATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRP 276
A+ P + SST TT + S ++PV+ S+S+ + T ++ P+ T S+
Sbjct: 289 ASVAPVKPSTSSTSSSTTVAAVTSSAAPVKPSTSSASSSTTVAAVT-SASAAPAVTTSKA 347
Query: 275 RVCTATLWSRKASSPTSSHG 216
T T S A + T+S G
Sbjct: 348 GTKTCTRKSSAAPAATTSAG 367
Score = 27.7 bits (60), Expect = 2.3
Identities = 22/79 (27%), Positives = 36/79 (44%)
Frame = -2
Query: 458 VAAATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASR 279
+ + PG+ SS P +A + S + PV+ S+S+ ++ P +P SST+S
Sbjct: 254 ITTSVAGPGSSSSNPGTPSAPSS-SSAVPVKPSTSSASVA--------PVKPSTSSTSSS 304
Query: 278 PRVCTATLWSRKASSPTSS 222
V T + TSS
Sbjct: 305 TTVAAVTSSAAPVKPSTSS 323
>NCU08919.1 NCU08919.1 hypothetical protein (51728 - 44999)
Length = 1951
Score = 30.4 bits (67), Expect = 0.36
Identities = 25/77 (32%), Positives = 34/77 (43%)
Frame = -2
Query: 455 AAATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRP 276
AAA PPP A +S+ H A ++ P +++S RA P + +L S P
Sbjct: 63 AAAPPPPPAVASSSLHGIAASV----PPPSSTNSMRATPHSSSSFNLRSPTREPSEYRHP 118
Query: 275 RVCTATLWSRKASSPTS 225
AT AS PTS
Sbjct: 119 LSSLATPAPFAASPPTS 135
>NCU07308.1 NCU07308.1 hypothetical protein (23233 - 28953)
Length = 1864
Score = 29.6 bits (65), Expect = 0.61
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 519 VKRVLRCFGPSEFSAAVTIFGGRGHAATWGKKLD 418
VK VLR +G + + TI RG ATWG +D
Sbjct: 1473 VKEVLRSYGNNFWKGDATIAPLRGALATWGLTID 1506
>NCU09216.1 NCU09216.1 hypothetical protein (107898 - 108941)
Length = 225
Score = 29.6 bits (65), Expect = 0.61
Identities = 22/82 (26%), Positives = 31/82 (36%)
Frame = -2
Query: 446 TPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRPRVC 267
+P P A S+TP T T + + S +++T A +ST P
Sbjct: 15 SPTPSATSTTPSATVTTKVQPKDSAPPIATTTNAF--------------ATSTQIEPTTT 60
Query: 266 TATLWSRKASSPTSSHGGRRRI 201
T T + KAS TS I
Sbjct: 61 TTTTSTTKASGTTSKSSSSSNI 82
>NCU02068.1 NCU02068.1 predicted protein (12808 - 18781)
Length = 1969
Score = 28.9 bits (63), Expect = 1.0
Identities = 22/74 (29%), Positives = 36/74 (47%), Gaps = 3/74 (4%)
Frame = -2
Query: 425 SSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRPRVCTATLWSR 246
S+T T TT + +S +S++TR + P PG ++ R + +++LW R
Sbjct: 1618 SATIATKTTTTTTTTTSSFSSSTTTR-----QTQQQHPTTPGNTTNTGRSKRRSSSLWIR 1672
Query: 245 KASSP---TSSHGG 213
SP +SS GG
Sbjct: 1673 TPPSPDASSSSPGG 1686
>NCU02052.1 NCU02052.1 hypothetical protein (3192 - 8804)
Length = 1870
Score = 28.9 bits (63), Expect = 1.0
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 356 STRALP*TKRLLSLPGRPGPSSTASRPRVCTATLWSRKASSP 231
ST A P T S+P P P+++A++P + TA KA+SP
Sbjct: 1318 STTAGPRTPLPTSVPSAPAPNTSAAQPSIKTAV---PKAASP 1356
>NCU07525.1 NCU07525.1 predicted protein (13151 - 10052)
Length = 943
Score = 28.5 bits (62), Expect = 1.4
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -2
Query: 425 SSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRPRVCTATLWSR 246
S+ P TT TT ++P + + S +L T R + P PSS++S A +
Sbjct: 656 SAGPPSTTTTT----TAPTDEAMSITSLVSTSRDTTSATSPSPSSSSSTTHPAAA----Q 707
Query: 245 KASSPTSSHGGRRRILWKR 189
K S+P +I WK+
Sbjct: 708 KPSTPKGIPTTTTKIPWKQ 726
>NCU01542.1 NCU01542.1 hypothetical protein (10929 - 15005)
Length = 1358
Score = 28.5 bits (62), Expect = 1.4
Identities = 29/85 (34%), Positives = 40/85 (46%), Gaps = 6/85 (7%)
Frame = -2
Query: 446 TPPPGARSSTPRHTTATT-LWSRSSPVEASSSTRALP*TKRLL----SLPGRPGPSSTAS 282
TP PG S+TP +++ T+ S S+P ++ +R T L S+ G P TA
Sbjct: 72 TPTPGRESATPIYSSFTSPSNSASAPSLQTNFSRPTVSTTAALSTARSVAGTLSPIDTAP 131
Query: 281 RPRVCTATLWSRKASSPTS-SHGGR 210
R TL A+S TS S GR
Sbjct: 132 RNGPSPLTLPPTSATSTTSTSFSGR 156
>NCU08600.1 NCU08600.1 predicted protein (14412 - 19583)
Length = 1276
Score = 28.1 bits (61), Expect = 1.8
Identities = 14/31 (45%), Positives = 18/31 (57%), Gaps = 9/31 (29%)
Frame = -3
Query: 280 GRECAQPPSGQG---------RQARQPPRMA 215
GRE +PP+G G RQ+ QPPRM+
Sbjct: 1141 GRERVEPPTGSGTSNMRSNPKRQSLQPPRMS 1171
>NCU07116.1 NCU07116.1 predicted protein (73936 - 80307)
Length = 2055
Score = 28.1 bits (61), Expect = 1.8
Identities = 19/68 (27%), Positives = 30/68 (43%), Gaps = 1/68 (1%)
Frame = -2
Query: 458 VAAATP-PPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTAS 282
V TP PGA +++ S S+P A++ LP ++ + P R P+S +
Sbjct: 1824 VTGVTPGAPGAVTTSAAAAPGRAPVSTSTPAPATTGISQLPSANKIQANPTRSAPASVPT 1883
Query: 281 RPRVCTAT 258
R T T
Sbjct: 1884 RAIAPTGT 1891
>NCU06832.1 NCU06832.1 hypothetical protein ( kinesin-like protein
Kif21a related protein [i
Length = 1755
Score = 28.1 bits (61), Expect = 1.8
Identities = 23/89 (25%), Positives = 41/89 (45%), Gaps = 11/89 (12%)
Frame = -2
Query: 425 SSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLP--------GRPGPSSTASRP-- 276
+S P+ + + + + SSP+ S+S ++LP + LP G P+S A RP
Sbjct: 1567 ASVPQRSDSKSAPNPSSPIRKSNSVQSLPSPPPAIPLPPLPSDRASGAVSPTSGAPRPPS 1626
Query: 275 -RVCTATLWSRKASSPTSSHGGRRRILWK 192
+ A L +++ + R RI+ K
Sbjct: 1627 KDILAAALSNQQFQAIQEDQEARIRIIEK 1655
>NCU09142.1 NCU09142.1 hypothetical protein (76040 - 73882)
Length = 697
Score = 28.1 bits (61), Expect = 1.8
Identities = 14/32 (43%), Positives = 19/32 (58%)
Frame = +2
Query: 299 DLGDPAETATSSFTVKLW*MRTPPQGSSCSTT 394
DLGD +A+ ++VKLW R P S+ TT
Sbjct: 522 DLGDLVLSASLDWSVKLWKARAPAATSTVVTT 553
>NCU08982.1 NCU08982.1 predicted protein (35769 - 34659)
Length = 308
Score = 27.7 bits (60), Expect = 2.3
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 458 VAAATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRA 345
+ + P P A SST RHT + LW +PV SSS+ A
Sbjct: 232 IPSLQPRPPAASST-RHTPSRPLW--ETPVARSSSSNA 266
>NCU09063.1 NCU09063.1 hypothetical protein (54833 - 59969)
Length = 1644
Score = 27.3 bits (59), Expect = 3.0
Identities = 19/53 (35%), Positives = 23/53 (42%), Gaps = 5/53 (9%)
Frame = -2
Query: 446 TPPPGARSS-----TPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRP 303
TP P + + T R +TAT +P ASSST P K GRP
Sbjct: 45 TPAPASAARKTAQRTTRRSTATPAPRAGTPAAASSSTAPAPAPKAAPKRRGRP 97
>NCU01846.1 NCU01846.1 predicted protein (2454 - 1150)
Length = 434
Score = 27.3 bits (59), Expect = 3.0
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -2
Query: 455 AAATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRP 276
++A PPP SSTP T+TT + P+ SST A P T P P +T +P
Sbjct: 71 SSAVPPPPPPSSTP--NTSTT--QQPPPI---SSTTAPPTT-------STPAPPTTTQQP 116
Query: 275 RVCTAT 258
T T
Sbjct: 117 STETFT 122
>NCU01214.1 NCU01214.1 hypothetical protein (196456 - 198606)
Length = 677
Score = 27.3 bits (59), Expect = 3.0
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 449 ATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRPRV 270
+TPP + S+T +T+++ S + S T + PG S + + P +
Sbjct: 417 STPPGSSESTTASNTSSSNPLSSTGTQSTGSETESST----------TPGTSESTTTPTI 466
Query: 269 CTATLWSRKASSPTSSHG 216
++ S + P+SS G
Sbjct: 467 SSSIPLSSASVLPSSSQG 484
>NCU08486.1 NCU08486.1 hypothetical protein ( hypothetical protein
B11B22.160 [imported] - N
Length = 198
Score = 26.9 bits (58), Expect = 3.9
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = -3
Query: 499 LWPFR-----VLCGGHHLWWPRPRRHLGQEARRRGIRLQQRCGAGAPLWRRPHL 353
LW F+ L G H++ RH G+ + I R G G W+R HL
Sbjct: 123 LWHFQQASNSCLAAGKHMYIYAADRHEGETSE---IATFTRLGGGEKTWKRSHL 173
>NCU01597.1 NCU01597.1 hypothetical protein (32055 - 23542)
Length = 2837
Score = 26.9 bits (58), Expect = 3.9
Identities = 28/76 (36%), Positives = 35/76 (45%), Gaps = 17/76 (22%)
Frame = -2
Query: 449 ATPPPGARSSTPRHTT-----ATTLW----SRSSPVEASSSTRAL--------P*TKRLL 321
ATP RS TP+ TT AT + +RSS + S + P TKR +
Sbjct: 164 ATPGTALRSETPKTTTRPMRPATPGFQLREARSSSKDVLDSDVTIDFSKLGFTPGTKRRI 223
Query: 320 SLPGRPGPSSTASRPR 273
SL PGPSS A + R
Sbjct: 224 SL--TPGPSSRAPKRR 237
>NCU06438.1 NCU06438.1 hypothetical protein (95424 - 92836)
Length = 862
Score = 26.9 bits (58), Expect = 3.9
Identities = 17/61 (27%), Positives = 26/61 (41%), Gaps = 5/61 (8%)
Frame = -1
Query: 606 IHVTPEDGF-----SYASYEVMGMDASALAYGDIVKRVLRCFGPSEFSAAVTIFGGRGHA 442
+HV P D F S S+ +G+ A+ L D + + GP + A +GH
Sbjct: 494 VHVVPADVFRRVISSIKSHSKLGLTATLLREDDKISHLNFLIGPKLYEANWMELSEKGHI 553
Query: 441 A 439
A
Sbjct: 554 A 554
>NCU06376.1 NCU06376.1 predicted protein (137542 - 135719)
Length = 564
Score = 26.6 bits (57), Expect = 5.1
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -2
Query: 452 AATPPPGARSSTP--RHTTATTLWSRSSPVEASSSTRALP*TKRL---LSLP 312
++ PPP SS P R + ++T +R S +SSST ++ T L LSLP
Sbjct: 344 SSPPPPPTTSSMPSSRSSFSSTKKARPSSSSSSSSTSSIYLTSTLSIPLSLP 395
>NCU09104.1 NCU09104.1 hypothetical protein (122932 - 115837)
Length = 2300
Score = 26.6 bits (57), Expect = 5.1
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 16/82 (19%)
Frame = -2
Query: 437 PGARSSTPRHTTATTLW-----------SRSSPVEAS----SSTRALP*TKRLL-SLPGR 306
P R+S P TTA+ S S PV A+ +ST +P + + S P +
Sbjct: 272 PNERASPPDVTTASDRAPSVSPFPERTPSTSQPVGATKPEDASTMNVPKGEPVAPSTPSK 331
Query: 305 PGPSSTASRPRVCTATLWSRKA 240
P P T++ PR+ W K+
Sbjct: 332 PAPKRTSTSPRMKKKVPWKGKS 353
>NCU08518.1 NCU08518.1 hypothetical protein (20240 - 21646)
Length = 438
Score = 26.6 bits (57), Expect = 5.1
Identities = 16/42 (38%), Positives = 21/42 (49%), Gaps = 6/42 (14%)
Frame = -2
Query: 455 AAATP------PPGARSSTPRHTTATTLWSRSSPVEASSSTR 348
AAATP P A +TP+ AT ++P A+ STR
Sbjct: 393 AAATPKKATATPKKAAGTTPKKAAATPKAEATTPARATRSTR 434
>NCU02065.1 NCU02065.1 hypothetical protein (2000 - 4849)
Length = 949
Score = 26.6 bits (57), Expect = 5.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 302 LGDPAETATSSFTVKLW*MRTPPQGSSCSTTLLQSYASASSFLPQVA-AWPRPPKMVTAA 478
L P+ T+TSS L + PQ SS STT + A+A+ F + + P P ++ +
Sbjct: 766 LSGPSSTSTSSALSDLASLSLTPQQSSTSTT---NAAAATHFQGKSSQPNPHPNLLLPSD 822
Query: 479 ENSEGPKHRRTLLTMS 526
+ + P R + T S
Sbjct: 823 QQQQKPLGRSSTTTTS 838
>NCU08086.1 NCU08086.1 predicted protein (124869 - 124453)
Length = 138
Score = 25.8 bits (55), Expect = 8.8
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 481 LCGGHHLWWPRPRRHLGQEARRRGIRLQ 398
LC G +WW R R ++ R G+ ++
Sbjct: 24 LCFGFRIWWGRRRDKRRKQQERDGVNVE 51
>NCU09346.1 NCU09346.1 predicted protein (26004 - 33136)
Length = 2295
Score = 25.8 bits (55), Expect = 8.8
Identities = 20/52 (38%), Positives = 25/52 (47%)
Frame = -2
Query: 458 VAAATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRP 303
V AT P R S P ++ L SRSSP A S++ P L S+P P
Sbjct: 607 VGKATEPRVDRYS-PLPAPSSPLLSRSSPYRAYKSSQPRPRESLLHSVPYTP 657
>NCU00394.1 NCU00394.1 predicted protein (115555 - 114086)
Length = 469
Score = 25.8 bits (55), Expect = 8.8
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = -2
Query: 455 AAATPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASR 279
A + P R STPR + T E SSST L R + G P P S A R
Sbjct: 35 AQSQGPAPTRLSTPRPKSPRT------SSEPSSSTNNLKAGTRSRTKRGSPSPQSNAQR 87
>NCU07086.1 NCU07086.1 predicted protein (101432 - 103536)
Length = 362
Score = 25.8 bits (55), Expect = 8.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 52 RANSLFREQ*PGRLLHSNQTTN 117
RA + F+E+ PGRL H N N
Sbjct: 299 RAANYFKERMPGRLAHDNLPNN 320
>NCU09449.1 NCU09449.1 hypothetical protein (5874 - 2580)
Length = 1059
Score = 25.8 bits (55), Expect = 8.8
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 443 PPPGARSSTPRHTTATTLW---SRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTAS 282
PPP + S PR +A +++ R V S P T R+ SLP G +TA+
Sbjct: 521 PPPPQQQSLPRQPSAQSIYDAREREREVIRERSISISPKT-RVPSLPSSAGRPATAT 576
>NCU07183.1 NCU07183.1 predicted protein (120538 - 119634)
Length = 284
Score = 25.8 bits (55), Expect = 8.8
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = -2
Query: 452 AATPPPGARSSTPRHTTATTLWSRSSPVEASSST-----RALP*TKRLLSLPGRPGPSST 288
AA+PPP + PR T++ + E ++S+ + P LS P +P P+
Sbjct: 8 AASPPPSSPPIVPRLQINTSIQTDDENTEPATSSPGFHRSSAPSPSPTLSSPPQPLPAKP 67
Query: 287 ASRPRVCTATLWS-RKASSPTSSHGGR 210
+ T +++S R P S+ R
Sbjct: 68 TASQLEPTPSIYSPRPDPVPNSADATR 94
>NCU06339.1 NCU06339.1 predicted protein (19631 - 21692)
Length = 667
Score = 25.8 bits (55), Expect = 8.8
Identities = 19/80 (23%), Positives = 34/80 (41%)
Frame = -2
Query: 446 TPPPGARSSTPRHTTATTLWSRSSPVEASSSTRALP*TKRLLSLPGRPGPSSTASRPRVC 267
+PPP + +P + T + +++T + T+ L P PSS +
Sbjct: 534 SPPPTSGQPSPTLSAVVTATNLRRGTTTATATAVIDTTEPLAP---PPSPSSNYLGSPIS 590
Query: 266 TATLWSRKASSPTSSHGGRR 207
T+ S + SP++S G R
Sbjct: 591 TSIASSSSSFSPSTSCNGTR 610
>NCU02089.1 NCU02089.1 hypothetical protein (19992 - 22376)
Length = 750
Score = 25.8 bits (55), Expect = 8.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 454 PRPRRHLGQEARRRGIRLQQRCGAGAPLWRRP 359
PRP H +E+RR RL G P W P
Sbjct: 28 PRPTPHQQRESRR---RLGGTSSGGVPTWSNP 56
Database: /phillip/Ncr/Ncr_P
Posted date: May 20, 2002 12:05 PM
Number of letters in database: 3,158,374
Number of sequences in database: 6531
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3777043
Number of Sequences: 6531
Number of extensions: 88495
Number of successful extensions: 482
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of query: 202
length of database: 3,158,374
effective HSP length: 42
effective length of query: 159
effective length of database: 2,884,072
effective search space: 458567448
effective search space used: 458567448
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)