Score E
Sequences producing significant alignments: (bits) Value
emb|CAA65313.1| (X96446) alpha purothionin [Triticum aestivum] 112 6e-25
sp|P01544|THN1_WHEAT ALPHA-1-PUROTHIONIN PRECURSOR (PUROTHI... 112 6e-25
pir||VSWTA2 alpha-2-thionin - wheat (fragment) 112 6e-25
emb|CAA65314.1| (X96447) alpha purothionin [Triticum aestivum] 110 2e-24
sp|P32032|THN2_WHEAT ALPHA-2-PUROTHIONIN PRECURSOR >gi|3483... 103 2e-22
dbj|BAA12336.1| (D84390) alpha-1 purothionin [Triticum aest... 101 1e-21
emb|CAA65316.1| (X96449) purothionin [Secale cereale] 100 3e-21
sp|P01545|THNA_HORVU ALPHA-HORDOTHIONIN PRECURSOR (PUROTHIO... 99 9e-21
pir||JA0087 alpha-hordothionin precursor - barley >gi|51433... 99 9e-21
sp|P01543|THNB_WHEAT PUROTHIONIN A-I PRECURSOR (BETA-PUROTH... 97 3e-20
sp|P21742|THNB_HORVU BETA-HORDOTHIONIN PRECURSOR >gi|100568... 96 6e-20
prf||1206255A hordothionin beta [Hordeum vulgare var. disti... 96 6e-20
emb|CAA65312.1| (X96445) beta purothionin [Triticum aestivum] 95 1e-19
emb|CAA54191.1| (X76861) Type V Thionin [Triticum aestivum] 73 5e-13
sp|Q05806|THN5_WHEAT TYPE V THIONIN PRECURSOR >gi|100807|pi... 69 1e-11
emb|CAA54190.1| (X76860) type V Thionin [Aegilops tauschii] 68 1e-11
gb|AAB21531.1| thionin [Hordeum vulgare=barley, ssp. vulgar... 50 4e-06
sp|P08772|THN3_HORVU LEAF-SPECIFIC THIONIN PRECURSOR (CLONE... 50 4e-06
prf||1404366A leaf specific thionin [Hordeum vulgare var. d... 50 4e-06
pir||S22515 thionin precursor, leaf - barley 50 5e-06
gb|AAB21529.1| thionin [Hordeum jubatum, Peptide, 137 aa] >... 49 6e-06
sp|P09617|THN5_HORVU LEAF-SPECIFIC THIONIN PRECURSOR (CLONE... 49 1e-05
gb|AAA91048.1| (L36883) thionin [Hordeum vulgare] 49 1e-05
sp|P09618|THN6_HORVU LEAF-SPECIFIC THIONIN PRECURSOR (CLONE... 48 2e-05
pir||S52547 thionin variant Thi2Ca3 - Abyssinian crambe >gi... 37 0.025
pir||S52546 thionin variant Thi2Ca2 - Abyssinian crambe >gi... 37 0.025
pir||S52549 thionin variant Thi2Ca5 - Abyssinian crambe >gi... 37 0.032
pir||S52545 thionin variant Thi2Ca1 - Abyssinian crambe 37 0.042
ref|NP_198507.1| thionin Thi2.2 [Arabidopsis thaliana] >gi|... 37 0.042
gb|AAC41679.1| (L41245) thionin [Arabidopsis thaliana] >gi|... 37 0.042
pir||S52554 thionin variant Thi2Ca11 - Abyssinian crambe 35 0.12
gb|AAB33010.1| crambin precursor=thionin variant Thi2Ca11 [... 35 0.12
pir||S52552 thionin variant Thi2Ca9 - Abyssinian crambe >gi... 35 0.16
pir||S52555 thionin variant Thi2Ca12 - Abyssinian crambe >g... 35 0.16
pir||S52553 thionin variant Thi2Ca10 - Abyssinian crambe >g... 33 0.36
gb|AAF54065.1| (AE003672) Alhambra gene product [alt 1] [Dr... 33 0.47
emb|CAA57351.1| (X81707) Thionin class 1 [Tulipa gesneriana] 33 0.47
ref|NP_179105.1| putative thionin [Arabidopsis thaliana] >g... 33 0.61
gb|AAK34593.1| (AE006613) hypothetical protein [Streptococc... 33 0.61
gb|AAF48189.1| (AE003490) CG11056 gene product [Drosophila ... 32 1.0
gb|AAF21800.1| (AF090836) thionin [Brassica rapa subsp. pek... 32 1.0
gb|AAB29759.1| viscotoxin A3=thionin precursor {clone Thi2V... 32 1.0
dbj|BAB02808.1| (AB024036) contains similarity to bacterici... 32 1.4
gb|AAF45820.1| (AE003425) EG:95B7.3 gene product [Drosophil... 32 1.4
pir||T13651 hypothetical protein 95B7.3 - fruit fly (Drosop... 32 1.4
ref|NP_188662.1| bactericidal permeability-increasing prote... 32 1.4
gb|AAF55804.1| (AE003732) CG15690 gene product [Drosophila ... 32 1.4
ref|NP_176784.1| thionin, putative [Arabidopsis thaliana] >... 31 1.8
gb|AAF49754.1| (AE003535) CG6419 gene product [Drosophila m... 31 1.8
pir||S52551 thionin variant Thi2Ca7 - Abyssinian crambe 31 2.3
ref|NP_177371.1| thionin [Arabidopsis thaliana] >gi|1232365... 31 2.3
gb|AAC41678.1| (L41244) thionin [Arabidopsis thaliana] >gi|... 31 2.3
prf||2007441A viscotoxin [Viscum album] 31 2.3
sp|P08943|THNB_VISAL VISCOTOXIN B PRECURSOR 30 3.0
gb|AAF55372.1| (AE003715) CG16941 gene product [Drosophila ... 30 3.0
gb|AAF45880.1| (AE003427) CG13019 gene product [Drosophila ... 30 3.9
pir||T49818 probable glutamate synthase (NADPH) [imported] ... 30 3.9
gb|AAF87986.1|AF254792_1 (AF254792) Period3 circadian clock... 30 5.1
gb|AAA74899.1| (L36127) repressible high-affinity phosphate... 30 5.1
dbj|BAA98397.1| (AP002545) methylase [Chlamydophila pneumon... 29 6.7
pir||B72108 conserved hypothetical protein CP0580 [imported... 29 6.7
gb|AAD18340.1| (AE001605) predicted methylase [Chlamydophil... 29 6.7
pir||S15466 L1 protein - bovine papillomavirus type 6 (frag... 29 6.7
pir||D83483 probable metal transporter PA1297 [imported] - ... 29 6.7
sp|P33293|BAF1_KLUMA TRANSCRIPTION FACTOR BAF1 (ARS BINDING... 29 6.7
gb|AAF56673.1| (AE003759) CG6051 gene product [Drosophila m... 29 8.8
pir||T09059 notch4 - mouse >gi|2564947|gb|AAB82004.1| (AF03... 29 8.8
ref|NP_035059.1| Notch gene homolog 4, (Drosophila) [Mus mu... 29 8.8
gb|AAC52630.1| (U43691) Notch4 [Mus musculus] 29 8.8
>emb|CAA65313.1| (X96446) alpha purothionin [Triticum aestivum]
Length = 137
Score = 112 bits (280), Expect = 6e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDAY 171
YCNLGCRSSVCDYMVNAA DDEEMKLYVENCADACVSFCNGDAGLPSLDAY
Sbjct: 87 YCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFCNGDAGLPSLDAY 137
>sp|P01544|THN1_WHEAT ALPHA-1-PUROTHIONIN PRECURSOR (PUROTHIONIN A-II)
emb|CAA50004.1| (X70666) alpha2 purothionin [Triticum aestivum]
Length = 126
Score = 112 bits (280), Expect = 6e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDAY 171
YCNLGCRSSVCDYMVNAA DDEEMKLYVENCADACVSFCNGDAGLPSLDAY
Sbjct: 76 YCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFCNGDAGLPSLDAY 126
>pir||VSWTA2 alpha-2-thionin - wheat (fragment)
Length = 125
Score = 112 bits (280), Expect = 6e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDAY 171
YCNLGCRSSVCDYMVNAA DDEEMKLYVENCADACVSFCNGDAGLPSLDAY
Sbjct: 75 YCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFCNGDAGLPSLDAY 125
>emb|CAA65314.1| (X96447) alpha purothionin [Triticum aestivum]
Length = 90
Score = 110 bits (276), Expect = 2e-24
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDAY 171
YCNLGCRSSVCDYMVNAA DDEEMKLYVENC DACVSFCNGDAGLPSLDAY
Sbjct: 40 YCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDACVSFCNGDAGLPSLDAY 90
>sp|P32032|THN2_WHEAT ALPHA-2-PUROTHIONIN PRECURSOR
pir||S31695 alpha-1-thionin - wheat
emb|CAA50003.1| (X70665) alpha1 purothionin [Triticum aestivum]
emb|CAA65315.1| (X96448) alpha purothionin [Triticum aestivum]
Length = 136
Score = 103 bits (258), Expect = 2e-22
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YCNLGCRSSVCDYMVNAA DDEEMKLYVENC DACV+FCNGDAGL SLDA
Sbjct: 87 YCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDACVNFCNGDAGLTSLDA 136
>dbj|BAA12336.1| (D84390) alpha-1 purothionin [Triticum aestivum]
Length = 136
Score = 101 bits (251), Expect = 1e-21
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YCNLGCRSSVCDYMVNAA DDEEMKLYVENC DACV+FCNGDAGL S DA
Sbjct: 87 YCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDACVNFCNGDAGLTSPDA 136
>emb|CAA65316.1| (X96449) purothionin [Secale cereale]
Length = 136
Score = 100 bits (248), Expect = 3e-21
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YCNLGCRSSVCDYMV+AA D+EEMKLYVE C DACVSFCNGDAGLPSL A
Sbjct: 87 YCNLGCRSSVCDYMVSAAADEEEMKLYVERCGDACVSFCNGDAGLPSLSA 136
>sp|P01545|THNA_HORVU ALPHA-HORDOTHIONIN PRECURSOR (PUROTHIONIN II)
pir||VSBH2 purothionin II precursor - barley
emb|CAA29330.1| (X05901) alpha-hordothionin precursor [Hordeum vulgare]
Length = 127
Score = 98.6 bits (244), Expect = 9e-21
Identities = 42/51 (82%), Positives = 47/51 (91%)
Frame = +1
Query: 16 RYCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
+YCNLGCR+S+CDYMVNAA DDEEMKLY+ENC DACV+FCNGDAGL SL A
Sbjct: 77 KYCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFCNGDAGLTSLTA 127
>pir||JA0087 alpha-hordothionin precursor - barley
gb|AAA32966.1| (M23080) alpha-hordothionin [Hordeum vulgare]
Length = 133
Score = 98.6 bits (244), Expect = 9e-21
Identities = 42/51 (82%), Positives = 47/51 (91%)
Frame = +1
Query: 16 RYCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
+YCNLGCR+S+CDYMVNAA DDEEMKLY+ENC DACV+FCNGDAGL SL A
Sbjct: 83 KYCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFCNGDAGLTSLTA 133
>sp|P01543|THNB_WHEAT PUROTHIONIN A-I PRECURSOR (BETA-PUROTHIONIN)
gb|AAB71137.1| (AF004018) beta purothionin precursor [Triticum aestivum]
Length = 136
Score = 96.7 bits (239), Expect = 3e-20
Identities = 42/50 (84%), Positives = 45/50 (90%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YCNLGCRSS+CDY+VNAA DDEEMKLYVE C DACV+FCN DAGL SLDA
Sbjct: 87 YCNLGCRSSLCDYIVNAAADDEEMKLYVEQCGDACVNFCNADAGLTSLDA 136
>sp|P21742|THNB_HORVU BETA-HORDOTHIONIN PRECURSOR
pir||S22977 beta-hordothionin precursor - barley
emb|CAA78352.1| (Z13008) beta-hordothionin [Hordeum vulgare]
Length = 136
Score = 95.9 bits (237), Expect = 6e-20
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YCNLGCR+S+CDYMVNAA DDEEMKLYVE+C+DACV+FCNGD GL SL A
Sbjct: 87 YCNLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFCNGDVGLTSLTA 136
>prf||1206255A hordothionin beta [Hordeum vulgare var. distichum]
Length = 127
Score = 95.9 bits (237), Expect = 6e-20
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YCNLGCR+S+CDYMVNAA DDEEMKLYVE+C+DACV+FCNGD GL SL A
Sbjct: 78 YCNLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFCNGDVGLTSLTA 127
>emb|CAA65312.1| (X96445) beta purothionin [Triticum aestivum]
Length = 136
Score = 95.1 bits (235), Expect = 1e-19
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YCNL CRSS+CDYMVNAA DDEEMKLYVE C DACV+FCN DAGL SLDA
Sbjct: 87 YCNLECRSSLCDYMVNAAADDEEMKLYVEQCGDACVNFCNADAGLTSLDA 136
>emb|CAA54191.1| (X76861) Type V Thionin [Triticum aestivum]
Length = 130
Score = 72.8 bits (177), Expect = 5e-13
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLD 165
YC+LGCRSSVCD +++ A + EEMKLYV+ C DAC SFC GD L SLD
Sbjct: 81 YCSLGCRSSVCDNVISTADNTEEMKLYVKRCGDACDSFCKGDTLLASLD 129
>sp|Q05806|THN5_WHEAT TYPE V THIONIN PRECURSOR
pir||S23511 thionin type V precursor - wheat
emb|CAA43844.1| (X61670) wheat type V thionin [Triticum aestivum]
emb|CAA43845.1| (X61671) wheat type V thionin [Triticum aestivum]
Length = 131
Score = 68.6 bits (166), Expect = 1e-11
Identities = 33/49 (67%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD-EEMKLYVENCADACVSFCNGDAGLPSLD 165
YC+LGCRSSVCD M+N A + EEMKLYV+ C AC SFC GD L SLD
Sbjct: 81 YCSLGCRSSVCDNMINTADNSTEEMKLYVKRCGVACDSFCKGDTLLASLD 130
>emb|CAA54190.1| (X76860) type V Thionin [Aegilops tauschii]
Length = 131
Score = 68.2 bits (165), Expect = 1e-11
Identities = 33/49 (67%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD-EEMKLYVENCADACVSFCNGDAGLPSLD 165
YC+LGCRSSVCD M+N A + EEMKLYV+ C AC SFC GD L SLD
Sbjct: 81 YCSLGCRSSVCDNMINRADNSTEEMKLYVKRCGVACDSFCKGDTLLASLD 130
>gb|AAB21531.1| thionin [Hordeum vulgare=barley, ssp. vulgare, leaf, cv. Carina,
Peptide, 137 aa]
Length = 137
Score = 50.1 bits (118), Expect = 4e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 16 RYCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
+YC +GCR+SVCD M N +EMK + C++AC FCN A + S++A
Sbjct: 88 QYCTIGCRNSVCDNMDN-VFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>sp|P08772|THN3_HORVU LEAF-SPECIFIC THIONIN PRECURSOR (CLONE DB4)
pir||S07648 thionin precursor, leaf - barley
emb|CAA29082.1| (X05576) thionin [Hordeum vulgare]
Length = 137
Score = 50.1 bits (118), Expect = 4e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 16 RYCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
+YC +GCR+SVCD M N +EMK + C++AC FCN A + S++A
Sbjct: 88 QYCTIGCRNSVCDNMDN-VFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>prf||1404366A leaf specific thionin [Hordeum vulgare var. distichum]
Length = 137
Score = 50.1 bits (118), Expect = 4e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 16 RYCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
+YC +GCR+SVCD M N +EMK + C++AC FCN A + S++A
Sbjct: 88 QYCTIGCRNSVCDNMDN-VFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>pir||S22515 thionin precursor, leaf - barley
Length = 137
Score = 49.7 bits (117), Expect = 5e-06
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YC +GCR+SVCD M N + +EMK + C++AC FCN + SL+A
Sbjct: 89 YCTIGCRTSVCDNMDNVS-RGQEMKFDMGLCSNACARFCNDGEVIQSLEA 137
>gb|AAB21529.1| thionin [Hordeum jubatum, Peptide, 137 aa]
gb|AAB21530.1| thionin [Hordeum marinum=barley, leaf, Peptide, 137 aa]
Length = 137
Score = 49.3 bits (116), Expect = 6e-06
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YC +GC++SVCD M N +EMK+ + C++ACV FCN + S++A
Sbjct: 89 YCTIGCKTSVCDNMDNV-FRGQEMKIDMGLCSNACVRFCNDGTVIQSVEA 137
>sp|P09617|THN5_HORVU LEAF-SPECIFIC THIONIN PRECURSOR (CLONES PKG1348, PKG1940, PKG2872
AND DG3)
gb|AAA32976.1| (M19046) precursor thionin [Hordeum vulgare]
gb|AAA32977.1| (M19047) precursor thionin [Hordeum vulgare]
gb|AAA32978.1| (M19048) precursor thionin [Hordeum vulgare]
Length = 137
Score = 48.5 bits (114), Expect = 1e-05
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YC +GCR+SVCD M N + +EMK + C++AC FCN + S++A
Sbjct: 89 YCTIGCRTSVCDNMDNVS-RGQEMKFDMGLCSNACARFCNDGEVIQSVEA 137
>gb|AAA91048.1| (L36883) thionin [Hordeum vulgare]
Length = 137
Score = 48.5 bits (114), Expect = 1e-05
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
YC +GCR+SVCD M N + +EMK + C++AC FCN + S++A
Sbjct: 89 YCTIGCRTSVCDNMDNVS-RGQEMKFDMGLCSNACARFCNDGEVIQSVEA 137
>sp|P09618|THN6_HORVU LEAF-SPECIFIC THIONIN PRECURSOR (CLONE BTH6)
gb|AAA91047.1| (L36882) thionin [Hordeum vulgare]
Length = 137
Score = 47.8 bits (112), Expect = 2e-05
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +1
Query: 16 RYCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGDAGLPSLDA 168
+YC +GC +SVCD M N +EMK + C++AC FCN A + S++A
Sbjct: 88 QYCTIGCTNSVCDNMDNV-FRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>pir||S52547 thionin variant Thi2Ca3 - Abyssinian crambe
gb|AAB33005.1| crambin precursor=thionin variant Thi2Ca3 [Crambe abyssinica,
seeds, Peptide Partial, 133 aa]
Length = 133
Score = 37.4 bits (85), Expect = 0.025
Identities = 19/39 (48%), Positives = 22/39 (55%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC 135
YC LGC SSVC + N D E + V C +AC SFC
Sbjct: 82 YCKLGCASSVCGALANLQNSDASEIVNGAVVQCNNACSSFC 122
>pir||S52546 thionin variant Thi2Ca2 - Abyssinian crambe
gb|AAB33004.1| crambin precursor=thionin variant Thi2Ca2 [Crambe abyssinica,
seeds, Peptide Partial, 134 aa]
Length = 134
Score = 37.4 bits (85), Expect = 0.025
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC 135
YC LGC SSVC + D E + + V +C +AC +FC
Sbjct: 83 YCKLGCASSVCGALTTLKNSDASEIVNVAVAHCTNACSNFC 123
>pir||S52549 thionin variant Thi2Ca5 - Abyssinian crambe
gb|AAB33006.1| crambin precursor=thionin variant Thi2Ca5 [Crambe abyssinica,
seeds, Peptide Partial, 118 aa]
Length = 118
Score = 37.0 bits (84), Expect = 0.032
Identities = 20/43 (46%), Positives = 23/43 (52%), Gaps = 3/43 (6%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC-NGDA 147
YC GC SSVC + N D E + V C +AC FC NG A
Sbjct: 67 YCKWGCASSVCGALTNLQNSDAREIVNGAVRQCTNACFDFCTNGSA 112
>pir||S52545 thionin variant Thi2Ca1 - Abyssinian crambe
Length = 136
Score = 36.6 bits (83), Expect = 0.042
Identities = 20/43 (46%), Positives = 23/43 (52%), Gaps = 3/43 (6%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC-NGDA 147
YC GC SSVC + N D E + V C +AC FC NG A
Sbjct: 85 YCKWGCASSVCGALTNLQNSDAREIVNGAVRQCTNACSDFCTNGSA 130
>ref|NP_198507.1| thionin Thi2.2 [Arabidopsis thaliana]
dbj|BAB11632.1| (AB016877) thionin [Arabidopsis thaliana]
Length = 134
Score = 36.6 bits (83), Expect = 0.042
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKL--YVENCADACVSFCNG 141
YC LGC SSVC + D L VE C AC S C G
Sbjct: 83 YCKLGCASSVCGALTTLQNFDTSKVLSEAVEQCTKACSSVCTG 125
>gb|AAC41679.1| (L41245) thionin [Arabidopsis thaliana]
prf||2204399B thionin [Arabidopsis thaliana]
Length = 134
Score = 36.6 bits (83), Expect = 0.042
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKL--YVENCADACVSFCNG 141
YC LGC SSVC + D L VE C AC S C G
Sbjct: 83 YCKLGCASSVCGALTTLQNFDASKVLSEAVEQCTKACSSVCTG 125
>pir||S52554 thionin variant Thi2Ca11 - Abyssinian crambe
Length = 133
Score = 35.0 bits (79), Expect = 0.12
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC 135
YC LGC SSVC + D E + V C +AC +FC
Sbjct: 82 YCKLGCASSVCGALTTLQNSDASEVVDGAVAQCTNACSNFC 122
>gb|AAB33010.1| crambin precursor=thionin variant Thi2Ca11 [Crambe abyssinica,
seeds, Peptide Partial, 130 aa]
Length = 130
Score = 35.0 bits (79), Expect = 0.12
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC 135
YC LGC SSVC + D E + V C +AC +FC
Sbjct: 79 YCKLGCASSVCGALTTLQNSDASEVVDGAVAQCTNACSNFC 119
>pir||S52552 thionin variant Thi2Ca9 - Abyssinian crambe
gb|AAB33008.1| crambin precursor=thionin variant Thi2Ca9 [Crambe abyssinica,
seeds, Peptide Partial, 135 aa]
Length = 135
Score = 34.7 bits (78), Expect = 0.16
Identities = 17/39 (43%), Positives = 20/39 (50%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC 135
YC LGC SSVC + D E + V C +AC FC
Sbjct: 84 YCKLGCASSVCGSLTTLQSSDASEIVDGAVAQCTNACSDFC 124
>pir||S52555 thionin variant Thi2Ca12 - Abyssinian crambe
gb|AAB33011.1| crambin precursor=thionin variant Thi2Ca12 [Crambe abyssinica,
seeds, Peptide Partial, 135 aa]
Length = 135
Score = 34.7 bits (78), Expect = 0.16
Identities = 17/39 (43%), Positives = 20/39 (50%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC 135
YC LGC SSVC + D E + V C +AC FC
Sbjct: 84 YCKLGCASSVCGSLTTLQSSDASEIVDGAVAQCTNACSDFC 124
>pir||S52553 thionin variant Thi2Ca10 - Abyssinian crambe
gb|AAB33009.1| crambin precursor=thionin variant Thi2Ca10 [Crambe abyssinica,
seeds, Peptide Partial, 134 aa]
Length = 134
Score = 33.5 bits (75), Expect = 0.36
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKL--YVENCADACVSFC 135
YC LGC SSVC + D + V C +AC +FC
Sbjct: 83 YCKLGCASSVCGSLATFQNSDASKIVDGAVAQCTNACSNFC 123
>gb|AAF54065.1| (AE003672) Alhambra gene product [alt 1] [Drosophila melanogaster]
Length = 1164
Score = 33.1 bits (74), Expect = 0.47
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Frame = -1
Query: 187 PWTRISTHQGMGGQHHRYRN*HKHQHNFPHRVS----------SLHRQQLR*PCSHTRKT 38
P R + G G H + + H H H+ H S LH+QQ + SH
Sbjct: 470 PARRSRSRSGESGSSHHHAHAHHHHHHPTHHNSHHQQNPQQQQQLHQQQQQNASSHMHAC 529
Query: 37 YIPSCSTSAATT 2
S STS +TT
Sbjct: 530 TNSSSSTSTSTT 541
>emb|CAA57351.1| (X81707) Thionin class 1 [Tulipa gesneriana]
Length = 114
Score = 33.1 bits (74), Expect = 0.47
Identities = 20/41 (48%), Positives = 24/41 (57%), Gaps = 4/41 (9%)
Frame = +1
Query: 13 PRYCNLGCRSSVCDYM--VNAAVD--DEEMKLYVENCADACVSFC 135
P Y LGC SS C + V+ A+D E MK VE C +AC C
Sbjct: 60 PGYEKLGCASSTCSTIDVVDEALDVAKEVMKEAVERCNNACSEVC 104
>ref|NP_179105.1| putative thionin [Arabidopsis thaliana]
gb|AAD03358.1| (AC005957) putative thionin [Arabidopsis thaliana]
Length = 135
Score = 32.7 bits (73), Expect = 0.61
Identities = 15/39 (38%), Positives = 22/39 (55%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDE--EMKLYVENCADACVSFC 135
YC LGC SS+C + + D ++ + VE C AC + C
Sbjct: 84 YCKLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKACSTIC 124
>gb|AAK34593.1| (AE006613) hypothetical protein [Streptococcus pyogenes M1 GAS]
Length = 183
Score = 32.7 bits (73), Expect = 0.61
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 263 PVCHPVLCVCISIPCSNKSHHVGCHVALLLP*CTCPGGRS 382
P+C +LC+ +++ C+NKS +G ALL+ + P G++
Sbjct: 104 PIC-TMLCIMVNVACNNKSGIIGAVAALLIITLSIPTGQT 142
>gb|AAF48189.1| (AE003490) CG11056 gene product [Drosophila melanogaster]
Length = 306
Score = 32.0 bits (71), Expect = 1.0
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -1
Query: 160 GMGGQHHRYRN*HK--HQHNFPHRVSSLHRQQ 71
G G Q H+Y++ H H H +PH+ S + +QQ
Sbjct: 177 GAGAQQHQYQHPHPYPHPHPYPHQTSVIQQQQ 208
>gb|AAF21800.1| (AF090836) thionin [Brassica rapa subsp. pekinensis]
Length = 133
Score = 32.0 bits (71), Expect = 1.0
Identities = 15/39 (38%), Positives = 20/39 (50%), Gaps = 1/39 (2%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDE-EMKLYVENCADACVSFC 135
YC LGC SSVC + + + V C +AC +FC
Sbjct: 83 YCKLGCASSVCGALTTLKNSMQVNCEGAVSQCTNACSNFC 122
>gb|AAB29759.1| viscotoxin A3=thionin precursor {clone Thi2Va1.2} [Viscum
album=mistletoe, Peptide, 111 aa]
Length = 111
Score = 32.0 bits (71), Expect = 1.0
Identities = 17/42 (40%), Positives = 19/42 (44%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGD 144
YC LGC SS C N D E ++ C AC CN D
Sbjct: 74 YCTLGCESSQC---ANTNGDAEAVR-----CKTACSDLCNND 107
>dbj|BAB02808.1| (AB024036) contains similarity to bactericidal
permeability-increasing protein~gene_id:MQC12.2
[Arabidopsis thaliana]
Length = 1424
Score = 31.6 bits (70), Expect = 1.4
Identities = 14/22 (63%), Positives = 15/22 (67%)
Frame = -2
Query: 198 EISDHGHASVRIKGWEASITVT 133
EISDHG ASV +KG IT T
Sbjct: 248 EISDHGDASVEVKGMNVRITAT 269
>gb|AAF45820.1| (AE003425) EG:95B7.3 gene product [Drosophila melanogaster]
Length = 415
Score = 31.6 bits (70), Expect = 1.4
Identities = 13/37 (35%), Positives = 20/37 (53%)
Frame = -1
Query: 181 TRISTHQGMGGQHHRYRN*HKHQHNFPHRVSSLHRQQ 71
T I H+ +G +H Y ++HQH+ H H+QQ
Sbjct: 24 THIHQHRALGNHYHHYHQHYQHQHHLLH-----HQQQ 55
>pir||T13651 hypothetical protein 95B7.3 - fruit fly (Drosophila melanogaster)
emb|CAA16816.1| (AL021728) /prediction=(method:''genefinder'',
version:''084'')~/prediction=(method:''genscan'',
version:''1.0'')~/match=(desc:''LD05179.5prime LD
Drosophila melanogaster embryo BlueScript Drosophila
melanogaster cDNA clone LD05179 5prime, mRNA sequenc>
Length = 415
Score = 31.6 bits (70), Expect = 1.4
Identities = 13/37 (35%), Positives = 20/37 (53%)
Frame = -1
Query: 181 TRISTHQGMGGQHHRYRN*HKHQHNFPHRVSSLHRQQ 71
T I H+ +G +H Y ++HQH+ H H+QQ
Sbjct: 24 THIHQHRALGNHYHHYHQHYQHQHHLLH-----HQQQ 55
>ref|NP_188662.1| bactericidal permeability-increasing protein precursor, putative
[Arabidopsis thaliana]
Length = 477
Score = 31.6 bits (70), Expect = 1.4
Identities = 14/22 (63%), Positives = 15/22 (67%)
Frame = -2
Query: 198 EISDHGHASVRIKGWEASITVT 133
EISDHG ASV +KG IT T
Sbjct: 124 EISDHGDASVEVKGMNVRITAT 145
>gb|AAF55804.1| (AE003732) CG15690 gene product [Drosophila melanogaster]
Length = 136
Score = 31.6 bits (70), Expect = 1.4
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Frame = -1
Query: 166 HQGMGGQHHRYRN*HKHQHN-----------FPHRVSSLHRQQLR*PCSHTRKTYIPSCS 20
H G QHH+ H+ Q + + HR SLH+Q L+ SHT T I S
Sbjct: 15 HGGANAQHHQQLLHHQQQQHQQTHQQHLQQQYHHRQHSLHQQHLQRQHSHTSLTKIHRQS 74
Query: 19 TS 14
+S
Sbjct: 75 SS 76
>ref|NP_176784.1| thionin, putative [Arabidopsis thaliana]
gb|AAG51299.1|AC026480_6 (AC026480) thionin, putative [Arabidopsis thaliana]
gb|AAK55733.1|AF380652_1 (AF380652) At1g66100/F15E12_20 [Arabidopsis thaliana]
Length = 134
Score = 31.2 bits (69), Expect = 1.8
Identities = 17/39 (43%), Positives = 20/39 (50%), Gaps = 2/39 (5%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFC 135
YC LGC SSVC + D E + VE C AC + C
Sbjct: 83 YCKLGCVSSVCGALTILQNSDASEIVNGEVEKCTMACSTVC 123
>gb|AAF49754.1| (AE003535) CG6419 gene product [Drosophila melanogaster]
Length = 217
Score = 31.2 bits (69), Expect = 1.8
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 163 QGMGGQHHRYRN*HK--HQHNFPHRVSSLHRQQLR*PCSHTRKTYIPSCST 17
QG+G HH + HQH+ PH+ +Q PCS P+ ST
Sbjct: 52 QGLGHSHHLHGQQLSLNHQHHHPHQSPQHQQQHQHHPCSSNSSNGSPNGST 102
>pir||S52551 thionin variant Thi2Ca7 - Abyssinian crambe
Length = 89
Score = 30.8 bits (68), Expect = 2.3
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 19 YCNLGCRSSVCD-YMVNAAVDDEEMKLYVENCADACVSFC 135
YC LGC SSVC + + E + V C +AC FC
Sbjct: 39 YCMLGCASSVCGATTLQTSNASEIVDGAVAQCTNACSHFC 78
>ref|NP_177371.1| thionin [Arabidopsis thaliana]
gb|AAG51790.1|AC067754_6 (AC067754) thionin; 63255-62748 [Arabidopsis thaliana]
Length = 118
Score = 30.8 bits (68), Expect = 2.3
Identities = 17/46 (36%), Positives = 21/46 (44%), Gaps = 2/46 (4%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFCNGDAGLP 156
+C LGC +SVC M D E + E CA C FC +P
Sbjct: 64 HCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYVVP 111
>gb|AAC41678.1| (L41244) thionin [Arabidopsis thaliana]
prf||2204399A thionin [Arabidopsis thaliana]
Length = 134
Score = 30.8 bits (68), Expect = 2.3
Identities = 17/46 (36%), Positives = 21/46 (44%), Gaps = 2/46 (4%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDD--EEMKLYVENCADACVSFCNGDAGLP 156
+C LGC +SVC M D E + E CA C FC +P
Sbjct: 80 HCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYVVP 127
>prf||2007441A viscotoxin [Viscum album]
Length = 111
Score = 30.8 bits (68), Expect = 2.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMVNAAVDDEEMKLYVENCADACVSFCNGD 144
YC +GC SS C N+ D E ++ C AC CN D
Sbjct: 74 YCTMGCESSQC---ANSNGDAEAVR-----CKTACSDLCNQD 107
>sp|P08943|THNB_VISAL VISCOTOXIN B PRECURSOR
Length = 103
Score = 30.4 bits (67), Expect = 3.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 19 YCNLGCRSSVCDYMV---NAAVDDEEMKLYVENCADACVSFCN 138
YC LGC+SS C + N+ VD E ++ C AC + C+
Sbjct: 54 YCTLGCQSSKCASITTPPNSEVDAEAVR-----CKAACSNLCD 91
>gb|AAF55372.1| (AE003715) CG16941 gene product [Drosophila melanogaster]
gb|AAK77262.1| (AY047530) GH03554p [Drosophila melanogaster]
Length = 784
Score = 30.4 bits (67), Expect = 3.0
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = -1
Query: 166 HQGMGGQHHRYRN*HKHQHNFPHRVSSLHR 77
HQG GG HH + N H H+ PH+ + H+
Sbjct: 585 HQGGGGGHHGHHN--PHHHHPPHQQAPPHQ 612
>gb|AAF45880.1| (AE003427) CG13019 gene product [Drosophila melanogaster]
Length = 100
Score = 30.0 bits (66), Expect = 3.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 158 PLMRTDACPWSEISQGKVVSHLCVQ*NWIPSRVSKPVCHPVLC 286
P R + S+IS+ ++ S+LC+ N +P VSK + + C
Sbjct: 45 PSFRGEVLKLSKISRNEMGSYLCIASNGVPPSVSKRISLSIHC 87
>pir||T49818 probable glutamate synthase (NADPH) [imported] - Neurospora crassa
emb|CAB92626.1| (AL356815) probable glutamate synthase (NADPH) [Neurospora crassa]
Length = 2116
Score = 30.0 bits (66), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (56%)
Frame = +1
Query: 73 VDDEEMKLYVENCADACVSFCNGDAGLP 156
+D++E+K C D V FC D+G P
Sbjct: 1644 LDEDELKYQSARCMDCGVPFCQSDSGCP 1671
>gb|AAF87986.1|AF254792_1 (AF254792) Period3 circadian clock protein [Danio rerio]
Length = 1281
Score = 29.6 bits (65), Expect = 5.1
Identities = 13/29 (44%), Positives = 17/29 (57%), Gaps = 3/29 (10%)
Frame = -1
Query: 172 STHQGMGGQ---HHRYRN*HKHQHNFPHRVSS 86
STH G HHR+ + H+H H+ H SS
Sbjct: 77 STHTSSSGNDSIHHRHHHHHRHHHHHHHHSSS 108
>gb|AAA74899.1| (L36127) repressible high-affinity phosphate permease [Neurospora
crassa]
Length = 569
Score = 29.6 bits (65), Expect = 5.1
Identities = 21/49 (42%), Positives = 27/49 (54%), Gaps = 9/49 (18%)
Frame = -1
Query: 280 HRVTHWFGYSRWDPILLNAKVR---------HDLAL*NLRPWTRISTHQGMGGQHHRY 134
HR G S P+L++ VR L L +LRPW R++ H QHHRY
Sbjct: 98 HRPARSLGRSASAPLLMSLVVRACTDWNCCSSSLPL-SLRPWLRVTFH-----QHHRY 149
>dbj|BAA98397.1| (AP002545) methylase [Chlamydophila pneumoniae J138]
Length = 266
Score = 29.3 bits (64), Expect = 6.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 198 EISDHGHASVRIKGWEASITVTETDTSISTIFHIEFHLFIVNSCV 64
E+S HG ++ W +S T T + EF LF++ SC+
Sbjct: 219 ELSSHGFLVSGLEEWTSSKTSTGKRAKAENLCRKEFPLFLMISCI 263
>pir||B72108 conserved hypothetical protein CP0580 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
Length = 266
Score = 29.3 bits (64), Expect = 6.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 198 EISDHGHASVRIKGWEASITVTETDTSISTIFHIEFHLFIVNSCV 64
E+S HG ++ W +S T T + EF LF++ SC+
Sbjct: 219 ELSSHGFLVSGLEEWTSSKTSTGKRAKAENLCRKEFPLFLMISCI 263
>gb|AAD18340.1| (AE001605) predicted methylase [Chlamydophila pneumoniae CWL029]
gb|AAF38398.1| (AE002216) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
Length = 266
Score = 29.3 bits (64), Expect = 6.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 198 EISDHGHASVRIKGWEASITVTETDTSISTIFHIEFHLFIVNSCV 64
E+S HG ++ W +S T T + EF LF++ SC+
Sbjct: 219 ELSSHGFLVSGLEEWTSSKTSTGKRAKAENLCRKEFPLFLMISCI 263
>pir||S15466 L1 protein - bovine papillomavirus type 6 (fragment)
emb|CAA41787.1| (X59064) L1 ORF [Bovine papillomavirus type 6]
Length = 106
Score = 29.3 bits (64), Expect = 6.7
Identities = 16/49 (32%), Positives = 30/49 (60%), Gaps = 3/49 (6%)
Frame = -3
Query: 323 DDFYSNKEWKYTHITQGDTLVWILSMGSNF---IERKGETRPCPVKSQTMDT 177
+D Y+ ++ ++T+ L+W + +G NF I ++G RP P K+ T D+
Sbjct: 43 EDPYAKYKFWDVNLTERFLLIWNMYLGRNFLFQIGKRGSKRPAP-KTVTFDS 93
>pir||D83483 probable metal transporter PA1297 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG04686.1|AE004559_5 (AE004559) probable metal transporter [Pseudomonas aeruginosa]
Length = 326
Score = 29.3 bits (64), Expect = 6.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 166 HQGMGGQHHRYRN*HKHQHNFPHRVSSLHRQQL 68
H G G HH + + H H H+ H HR L
Sbjct: 155 HHGHGHSHHHHHHHHHHHHHHDHHA---HRHDL 184
>sp|P33293|BAF1_KLUMA TRANSCRIPTION FACTOR BAF1 (ARS BINDING FACTOR 1) (PROTEIN ABF1)
(BIDIRECTIONALLY ACTING FACTOR)
pir||S33791 ARS-binding protein - yeast (Kluyveromyces marxianus)
emb|CAA79673.1| (Z19865) ARS-binding factor 1 [Kluyveromyces marxianus]
Length = 496
Score = 29.3 bits (64), Expect = 6.7
Identities = 11/32 (34%), Positives = 17/32 (52%)
Frame = -1
Query: 166 HQGMGGQHHRYRN*HKHQHNFPHRVSSLHRQQ 71
HQ G H+++ H+HQH H+ H+ Q
Sbjct: 283 HQISGADQHQHQLQHQHQHQHQHQHQHQHQHQ 314
>gb|AAF56673.1| (AE003759) CG6051 gene product [Drosophila melanogaster]
Length = 920
Score = 28.9 bits (63), Expect = 8.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 166 HQGMGGQHHRYRN*HKHQHNFPH 98
H HH +R+ H+HQH PH
Sbjct: 514 HHQRHHHHHHHRHPHQHQHRQPH 536
>pir||T09059 notch4 - mouse
gb|AAB82004.1| (AF030001) notch4 [Mus musculus]
Length = 1964
Score = 28.9 bits (63), Expect = 8.8
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 263 PVCHPVLCVCISIPCSNKSHHVGCHVALLLP*CTCPGG 376
P C L CIS PC +H CH CTCP G
Sbjct: 683 PECETELGGCISTPC---AHGGTCHPQPSGYNCTCPAG 717
>ref|NP_035059.1| Notch gene homolog 4, (Drosophila) [Mus musculus]
sp|P31695|NTC4_MOUSE NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 4 PRECURSOR (TRANSFORMING
PROTEIN INT-3)
gb|AAB38377.1| (M80456) [Mus musculus activated Int-3 mammary gene mRNA, complete
cds.], gene product
Length = 1964
Score = 28.9 bits (63), Expect = 8.8
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 263 PVCHPVLCVCISIPCSNKSHHVGCHVALLLP*CTCPGG 376
P C L CIS PC +H CH CTCP G
Sbjct: 683 PECETELGGCISTPC---AHGGTCHPQPSGYNCTCPAG 717
>gb|AAC52630.1| (U43691) Notch4 [Mus musculus]
Length = 1964
Score = 28.9 bits (63), Expect = 8.8
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 263 PVCHPVLCVCISIPCSNKSHHVGCHVALLLP*CTCPGG 376
P C L CIS PC +H CH CTCP G
Sbjct: 683 PECETELGGCISTPC---AHGGTCHPQPSGYNCTCPAG 717
Database: nr
Posted date: Sep 1, 2001 3:31 AM
Number of letters in database: 238,836,854
Number of sequences in database: 750,817
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,978,664
Number of Sequences: 750817
Number of extensions: 3948017
Number of successful extensions: 11077
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 10166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10890
length of database: 238,836,854
effective HSP length: 102
effective length of database: 162,253,520
effective search space used: 3894084480
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)