Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA04815.1| (D21349) beta-amylase [Hordeum vulgare] >gi... 169 2e-47
gb|AAC67245.1| (AF061203) beta-amylase [Hordeum vulgare] 169 2e-47
sp|P16098|AMYB_HORVU BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 169 7e-47
dbj|BAB39391.1| (AB048949) Sd1 beta-amylase [Hordeum vulgare] 167 7e-47
emb|CAC16789.1| (AJ301645) beta-amylase [Hordeum vulgare] 167 7e-47
gb|AAG25637.1| (AF300799) beta-amylase [Hordeum vulgare] 169 7e-47
gb|AAG25638.1| (AF300800) beta-amylase [Hordeum vulgare] 167 7e-47
sp|P30271|AMYB_SECCE BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 169 8e-46
pdb|1B1Y|A Chain A, Sevenfold Mutant Of Barley Beta-Amylase 168 1e-41
sp|P93594|AMYB_WHEAT BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 151 1e-36
pir||JQ2248 beta-amylase (EC 3.2.1.2) - rye >gi|393450|emb|... 147 1e-35
gb|AAA33898.1| (L10345) beta-amylase [Oryza sativa] 138 1e-32
gb|AAA33899.1| (L10346) beta-amylase [Oryza sativa] 136 3e-32
sp|P55005|AMYB_MAIZE BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 129 5e-30
gb|AAD15902.1| (AF068119) beta-amylase [Zea mays] 129 5e-30
gb|AAK30294.1|AF353207_1 (AF353207) beta-amylase [Castanea ... 87 3e-17
sp|O64407|AMYB_VIGUN BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 84 2e-16
sp|O65015|AMYB_TRIRP BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 84 2e-16
dbj|BAA09462.1| (D50866) beta-amylase [Glycine max] >gi|219... 81 2e-15
sp|P10538|AMYB_SOYBN BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 81 2e-15
pdb|1BTC| Beta-Amylase (E.C.3.2.1.2) Complex With Alpha-... 81 2e-15
pdb|1BYA| Beta-Amylase (E.C.3.2.1.2) >gi|576034|pdb|1BYB... 81 2e-15
pdb|1BFN| Beta-AmylaseBETA-Cyclodextrin Complex 81 2e-15
sp|O22585|AMYB_MEDSA BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 80 2e-15
dbj|BAA02286.1| (D12882) beta-amylase [Ipomoea batatas] 76 6e-14
sp|P10537|AMYB_IPOBA BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 76 6e-14
dbj|BAA00828.1| (D01022) beta-amylase [Ipomoea batatas] 76 6e-14
pdb|1FA2|A Chain A, Crystal Structure Of Beta-Amylase From ... 76 6e-14
emb|CAA76131.1| (Y16242) beta-amylase [Triticum aestivum] 70 4e-12
ref|NP_180788.1| putative beta-amylase [Arabidopsis thalian... 70 4e-12
gb|AAG44882.1|AF284857_1 (AF284857) beta-amylase [Calystegi... 68 2e-11
gb|AAA33941.1| (M92090) beta-amylase [Glycine max] 64 2e-10
ref|NP_193256.1| beta-amylase [Arabidopsis thaliana] >gi|74... 63 4e-10
sp|P25853|AMYB_ARATH BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTO... 63 4e-10
dbj|BAA07842.1| (D43783) beta-amylase [Arabidopsis thaliana... 61 2e-09
gb|AAB64177.1| (AF012345) beta-amylase [Hordeum vulgare] 42 7e-04
ref|NP_191958.1| putative beta-amylase [Arabidopsis thalian... 38 0.014
ref|NP_182112.1| putative beta-amylase [Arabidopsis thalian... 35 0.089
ref|NP_176541.1| unknown protein [Arabidopsis thaliana] >gi... 32 0.75
pir||D71439 probable Beta-Amylase - Arabidopsis thaliana 32 1.3
gb|AAH02424.1|AAH02424 (BC002424) Similar to integral membr... 32 1.3
ref|NP_193442.1| putative beta-amylase [Arabidopsis thalian... 32 1.3
emb|CAB58423.1| (AJ250341) beta-amylase enzyme [Arabidopsis... 32 1.3
ref|NP_071880.1| trans-acting transcription factor 5 [Mus m... 31 1.7
ref|NP_112188.1| integral membrane protein 3 [Homo sapiens]... 31 2.2
sp|P35630|ADH1_ENTHI NADP-DEPENDENT ALCOHOL DEHYDROGENASE >... 30 2.9
sp|O13074|HXB4_FUGRU HOMEOBOX PROTEIN HOX-B4 (HOXB-4) >gi|8... 30 4.9
gb|AAK83353.1|AF388363_1 (AF388363) zinc finger buttonhead-... 29 6.4
gb|AAF99784.1|AC012463_1 (AC012463) T2E6.3 [Arabidopsis tha... 29 6.4
emb|CAA44232.1| (X62373) hydroxylacyl-CoA dehydrogenase [St... 29 6.4
ref|NP_175221.1| hypothetical protein [Arabidopsis thaliana] 29 6.4
dbj|BAA24920.1| (AB011023) transposase [Burkholderia glumae] 29 6.4
gb|AAG60205.1|AC084763_25 (AC084763) putative chloroplast-t... 29 8.3
>dbj|BAA04815.1| (D21349) beta-amylase [Hordeum vulgare]
dbj|BAA08741.1| (D49999) beta-amylase [Hordeum vulgare]
gb|AAC67246.1| (AF061204) beta-amylase [Hordeum vulgare subsp. spontaneum]
Length = 535
Score = 169 bits (427), Expect(2) = 2e-47
Identities = 77/91 (84%), Positives = 84/91 (91%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN SGPPEH LFGFTYLRLSN LVEGQNYVNFKTFVDRMHANLP DP VDP+APL R
Sbjct: 398 PHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANLPRDPYVDPMAPLPR 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
SGPE++I+MILQAA PKL+PFPF+EHTDLPV
Sbjct: 458 SGPEISIEMILQAAQPKLQPFPFQEHTDLPV 488
Score = 39.3 bits (90), Expect(2) = 2e-47
Identities = 19/42 (45%), Positives = 24/42 (56%)
Frame = +1
Query: 280 PTCRFKASVASVVGRLKAPLVAWVGEVQDPTGGMGGELPVTM 405
PTC + G++K P G+ +DPT GMGGELP TM
Sbjct: 501 PTC-------GMGGQVKGPTGGMGGQAEDPTSGMGGELPATM 535
>gb|AAC67245.1| (AF061203) beta-amylase [Hordeum vulgare]
Length = 535
Score = 169 bits (427), Expect(2) = 2e-47
Identities = 77/91 (84%), Positives = 84/91 (91%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN SGPPEH LFGFTYLRLSN LVEGQNYVNFKTFVDRMHANLP DP VDP+APL R
Sbjct: 398 PHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANLPRDPYVDPMAPLPR 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
SGPE++I+MILQAA PKL+PFPF+EHTDLPV
Sbjct: 458 SGPEISIEMILQAAQPKLQPFPFQEHTDLPV 488
Score = 39.3 bits (90), Expect(2) = 2e-47
Identities = 19/42 (45%), Positives = 24/42 (56%)
Frame = +1
Query: 280 PTCRFKASVASVVGRLKAPLVAWVGEVQDPTGGMGGELPVTM 405
PTC + G++K P G+ +DPT GMGGELP TM
Sbjct: 501 PTC-------GMGGQVKGPTGGMGGQAEDPTSGMGGELPATM 535
>sp|P16098|AMYB_HORVU BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
pir||S00222 beta-amylase (EC 3.2.1.2) - barley
emb|CAA36556.1| (X52321) beta-amylase (AA 1 - 535) [Hordeum vulgare]
Length = 535
Score = 169 bits (427), Expect(2) = 7e-47
Identities = 77/91 (84%), Positives = 84/91 (91%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN SGPPEH LFGFTYLRLSN LVEGQNYVNFKTFVDRMHANLP DP VDP+APL R
Sbjct: 398 PHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANLPRDPYVDPMAPLPR 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
SGPE++I+MILQAA PKL+PFPF+EHTDLPV
Sbjct: 458 SGPEISIEMILQAAQPKLQPFPFQEHTDLPV 488
Score = 37.7 bits (86), Expect(2) = 7e-47
Identities = 18/42 (42%), Positives = 24/42 (56%)
Frame = +1
Query: 280 PTCRFKASVASVVGRLKAPLVAWVGEVQDPTGGMGGELPVTM 405
PTC + G++K P G+ +DPT G+GGELP TM
Sbjct: 501 PTC-------GMGGQVKGPTGGMGGQAEDPTSGIGGELPATM 535
>dbj|BAB39391.1| (AB048949) Sd1 beta-amylase [Hordeum vulgare]
Length = 535
Score = 167 bits (423), Expect(2) = 7e-47
Identities = 76/91 (83%), Positives = 83/91 (90%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN SGPPEH LFGFTYLRLSN LVEGQNY NFKTFVDRMHANLP DP VDP+APL R
Sbjct: 398 PHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYANFKTFVDRMHANLPRDPYVDPMAPLPR 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
SGPE++I+MILQAA PKL+PFPF+EHTDLPV
Sbjct: 458 SGPEISIEMILQAAQPKLQPFPFQEHTDLPV 488
Score = 39.3 bits (90), Expect(2) = 7e-47
Identities = 19/42 (45%), Positives = 24/42 (56%)
Frame = +1
Query: 280 PTCRFKASVASVVGRLKAPLVAWVGEVQDPTGGMGGELPVTM 405
PTC + G++K P G+ +DPT GMGGELP TM
Sbjct: 501 PTC-------GMGGQVKGPTGGMGGQAEDPTSGMGGELPATM 535
>emb|CAC16789.1| (AJ301645) beta-amylase [Hordeum vulgare]
Length = 535
Score = 167 bits (423), Expect(2) = 7e-47
Identities = 76/91 (83%), Positives = 83/91 (90%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN SGPPEH LFGFTYLRLSN LVEGQNY NFKTFVDRMHANLP DP VDP+APL R
Sbjct: 398 PHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYANFKTFVDRMHANLPRDPYVDPMAPLPR 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
SGPE++I+MILQAA PKL+PFPF+EHTDLPV
Sbjct: 458 SGPEISIEMILQAAQPKLQPFPFQEHTDLPV 488
Score = 39.3 bits (90), Expect(2) = 7e-47
Identities = 19/42 (45%), Positives = 24/42 (56%)
Frame = +1
Query: 280 PTCRFKASVASVVGRLKAPLVAWVGEVQDPTGGMGGELPVTM 405
PTC + G++K P G+ +DPT GMGGELP TM
Sbjct: 501 PTC-------GMGGQVKGPTGGMGGQAEDPTSGMGGELPATM 535
>gb|AAG25637.1| (AF300799) beta-amylase [Hordeum vulgare]
Length = 533
Score = 169 bits (427), Expect(2) = 7e-47
Identities = 77/91 (84%), Positives = 84/91 (91%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN SGPPEH LFGFTYLRLSN LVEGQNYVNFKTFVDRMHANLP DP VDP+APL R
Sbjct: 396 PHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANLPRDPYVDPMAPLPR 455
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
SGPE++I+MILQAA PKL+PFPF+EHTDLPV
Sbjct: 456 SGPEISIEMILQAAQPKLQPFPFQEHTDLPV 486
Score = 37.7 bits (86), Expect(2) = 7e-47
Identities = 18/42 (42%), Positives = 24/42 (56%)
Frame = +1
Query: 280 PTCRFKASVASVVGRLKAPLVAWVGEVQDPTGGMGGELPVTM 405
PTC + G++K P G+ +DPT G+GGELP TM
Sbjct: 499 PTC-------GMGGQVKGPTGGMGGQAEDPTSGIGGELPATM 533
>gb|AAG25638.1| (AF300800) beta-amylase [Hordeum vulgare]
Length = 533
Score = 167 bits (423), Expect(2) = 7e-47
Identities = 76/91 (83%), Positives = 83/91 (90%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN SGPPEH LFGFTYLRLSN LVEGQNY NFKTFVDRMHANLP DP VDP+APL R
Sbjct: 396 PHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYANFKTFVDRMHANLPRDPYVDPMAPLPR 455
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
SGPE++I+MILQAA PKL+PFPF+EHTDLPV
Sbjct: 456 SGPEISIEMILQAAQPKLQPFPFQEHTDLPV 486
Score = 39.3 bits (90), Expect(2) = 7e-47
Identities = 19/42 (45%), Positives = 24/42 (56%)
Frame = +1
Query: 280 PTCRFKASVASVVGRLKAPLVAWVGEVQDPTGGMGGELPVTM 405
PTC + G++K P G+ +DPT GMGGELP TM
Sbjct: 499 PTC-------GMGGQVKGPTGGMGGQAEDPTSGMGGELPATM 533
>sp|P30271|AMYB_SECCE BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
pir||S38779 beta-amylase (EC 3.2.1.2) - rye (fragment)
emb|CAA40105.1| (X56785) alpha-d-maltose; beta-amylase [Secale cereale]
Length = 222
Score = 169 bits (428), Expect(2) = 8e-46
Identities = 77/92 (83%), Positives = 85/92 (91%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN+S P EH LFGFTYLRLSN L+EGQNYVNFKTFVDRMHANLPHDP VDPVAPLQR
Sbjct: 94 PHGINHSSPTEHKLFGFTYLRLSNQLLEGQNYVNFKTFVDRMHANLPHDPSVDPVAPLQR 153
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPVQ 296
SGPE+ I++ILQAA PKL+PFPFE+HTDLPVQ
Sbjct: 154 SGPEIPIEVILQAAQPKLDPFPFEDHTDLPVQ 185
Score = 33.9 bits (76), Expect(2) = 8e-46
Identities = 17/26 (65%), Positives = 19/26 (72%), Gaps = 1/26 (3%)
Frame = +1
Query: 319 GRLKAPLVAWVGEVQ-DPTGGMGGELP 396
G ++ P GEVQ DPTGGMGGELP
Sbjct: 193 GEVECPAGGIGGEVQQDPTGGMGGELP 219
>pdb|1B1Y|A Chain A, Sevenfold Mutant Of Barley Beta-Amylase
Length = 500
Score = 168 bits (425), Expect(2) = 1e-41
Identities = 76/91 (83%), Positives = 84/91 (91%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN SGPPEH LFGFTYLRLSN LVEGQNYVNFKTFVDRMHANLP DP VDP+APL R
Sbjct: 394 PHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANLPRDPYVDPMAPLPR 453
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
SGPE++I+MILQAA PK++PFPF+EHTDLPV
Sbjct: 454 SGPEISIEMILQAAQPKIQPFPFQEHTDLPV 484
Score = 21.2 bits (43), Expect(2) = 1e-41
Identities = 7/8 (87%), Positives = 8/8 (99%)
Frame = +1
Query: 367 PTGGMGGE 390
PTGGMGG+
Sbjct: 486 PTGGMGGQ 493
>sp|P93594|AMYB_WHEAT BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
emb|CAA67128.1| (X98504) beta-amylase [Triticum aestivum]
Length = 503
Score = 151 bits (381), Expect = 1e-36
Identities = 68/92 (73%), Positives = 81/92 (87%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P GIN +GPPEH LFGFTYLRLSN L+EGQNY F+TFV++MHANL HDP VDPVAPL+R
Sbjct: 398 PKGINKNGPPEHKLFGFTYLRLSNELLEGQNYATFQTFVEKMHANLGHDPSVDPVAPLER 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPVQ 296
S PE+ I+MIL+AA PKLEPFPF+++TDLPV+
Sbjct: 458 SKPEMPIEMILKAAQPKLEPFPFDKNTDLPVK 489
>pir||JQ2248 beta-amylase (EC 3.2.1.2) - rye
emb|CAA77817.1| (Z11772) Beta-amylase [Secale cereale]
Length = 503
Score = 147 bits (372), Expect = 1e-35
Identities = 66/92 (71%), Positives = 80/92 (86%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P GIN +GPP+H L+GFTYLRLSN L EGQNY F+TFV++MHANL HDP VDPVAPL+R
Sbjct: 398 PKGINENGPPQHKLYGFTYLRLSNELQEGQNYATFQTFVEKMHANLGHDPTVDPVAPLER 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPVQ 296
S PE+ I+MIL+AA PKLEPFPF+++TDLPV+
Sbjct: 458 SKPEMPIEMILKAARPKLEPFPFDKNTDLPVK 489
>gb|AAA33898.1| (L10345) beta-amylase [Oryza sativa]
Length = 488
Score = 138 bits (347), Expect = 1e-32
Identities = 65/91 (71%), Positives = 74/91 (80%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN +GPPEH LFGFTYLRLS+ L+EGQNY FKTFV RMHANL VDP+ PLQR
Sbjct: 398 PHGINKNGPPEHKLFGFTYLRLSDELLEGQNYSTFKTFVKRMHANLVSATNVDPLEPLQR 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S PE+ I ILQAAHPKL PFPF+E+TD+PV
Sbjct: 458 SMPEMPIGKILQAAHPKLAPFPFDENTDMPV 488
>gb|AAA33899.1| (L10346) beta-amylase [Oryza sativa]
Length = 488
Score = 136 bits (343), Expect = 3e-32
Identities = 65/91 (71%), Positives = 74/91 (80%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P+GIN +GPPE+ LFGFTYLRLS+ L+EGQNY FKTFV RMHANL VDP+ PLQR
Sbjct: 398 PHGINKNGPPEYKLFGFTYLRLSDELLEGQNYSTFKTFVKRMHANLVSATNVDPLEPLQR 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S PE+ I ILQAAHPKL PFPF+E+TDLPV
Sbjct: 458 SMPEMPIGKILQAAHPKLAPFPFDENTDLPV 488
>sp|P55005|AMYB_MAIZE BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
pir||S37075 beta-amylase (EC 3.2.1.2) - maize
emb|CAA81091.1| (Z25871) beta-amylase [Zea mays]
Length = 488
Score = 129 bits (324), Expect = 5e-30
Identities = 60/91 (65%), Positives = 72/91 (78%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P GIN +GPPEH L GFTYLR+S+ L + QNY FKTFV RMHANL ++P VDPVAPL+R
Sbjct: 398 PQGINKNGPPEHKLHGFTYLRVSDELFQEQNYTTFKTFVRRMHANLDYNPNVDPVAPLER 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S E+ I+ IL+ A PKLEPFPF++ TDLPV
Sbjct: 458 SKAEIPIEEILEVAQPKLEPFPFDKDTDLPV 488
>gb|AAD15902.1| (AF068119) beta-amylase [Zea mays]
Length = 488
Score = 129 bits (324), Expect = 5e-30
Identities = 60/91 (65%), Positives = 72/91 (78%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P GIN +GPPEH L GFTYLR+S+ L + QNY FKTFV RMHANL ++P VDPVAPL+R
Sbjct: 398 PQGINKNGPPEHKLHGFTYLRVSDELFQEQNYTTFKTFVRRMHANLDYNPNVDPVAPLER 457
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S E+ I+ IL+ A PKLEPFPF++ TDLPV
Sbjct: 458 SKAEIPIEEILEVAQPKLEPFPFDKDTDLPV 488
>gb|AAK30294.1|AF353207_1 (AF353207) beta-amylase [Castanea crenata]
Length = 514
Score = 87.0 bits (214), Expect = 3e-17
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+N GPP+ ++G TYLRLS+ L++ N+ FKTFV +MHA+ D C DP
Sbjct: 405 PNGVNKEGPPKLRMYGVTYLRLSDDLLQENNFNIFKTFVKKMHAD--QDYCPDPEKYSHH 462
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+RS P++ I+ +L+A P +EPFP+++ TD+ V
Sbjct: 463 IGPLERSKPKMPIEYLLEATEP-MEPFPWDKETDMSV 498
>sp|O64407|AMYB_VIGUN BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
pir||T11575 beta-amylase (EC 3.2.1.2) - cowpea
emb|CAA12395.1| (AJ225087) beta amylase [Vigna unguiculata]
Length = 496
Score = 84.3 bits (207), Expect = 2e-16
Identities = 41/91 (45%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+N GPP+H ++G TYLRLS+ L++ N+ FK FV +MHA+ D C DP
Sbjct: 401 PQGVNKDGPPKHRMYGVTYLRLSDELLQQSNFDIFKKFVVKMHAD--QDYCEDPQEYNHG 458
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+RS P++ +D++ +A P + PFP++ TD+ V
Sbjct: 459 IPPLKRSEPKIPVDVLNEATKP-IPPFPWDSETDMKV 494
>sp|O65015|AMYB_TRIRP BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
pir||T08117 beta-amylase (EC 3.2.1.2) - white clover
gb|AAD04259.1| (AF049098) beta-amylase [Trifolium repens]
Length = 496
Score = 84.3 bits (207), Expect = 2e-16
Identities = 43/91 (47%), Positives = 62/91 (67%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+N GPP+ ++G TYLRLS+ L++ N+ FK FV +MHA+ H C DP
Sbjct: 401 PQGVNKDGPPKLRMYGVTYLRLSDDLLQESNFEIFKKFVVKMHADQSH--CDDPQEYNHA 458
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+RSGP + +D +L+A P L PFP++ TD+ V
Sbjct: 459 IPPLKRSGPNIPVDDLLEATKPIL-PFPWDSETDMKV 494
>dbj|BAA09462.1| (D50866) beta-amylase [Glycine max]
dbj|BAA20453.1| (AB004271) beta-amylase [Glycine max]
Length = 496
Score = 80.9 bits (198), Expect = 2e-15
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+NN+GPP+ ++FG TYLRLS+ L++ N+ FK FV +MHA+ D C +P
Sbjct: 401 PQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD--QDYCANPQKYNHA 458
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+ S P++ I+++L+A P L PFP+ TD+ V
Sbjct: 459 ITPLKPSAPKIPIEVLLEATKPTL-PFPWLPETDMKV 494
>sp|P10538|AMYB_SOYBN BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
pir||A60473 beta-amylase (EC 3.2.1.2) 2 [validated] - soybean
emb|CAA50551.1| (X71419) unnamed protein product [Glycine max]
Length = 496
Score = 80.9 bits (198), Expect = 2e-15
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+NN+GPP+ ++FG TYLRLS+ L++ N+ FK FV +MHA+ D C +P
Sbjct: 401 PQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD--QDYCANPQKYNHA 458
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+ S P++ I+++L+A P L PFP+ TD+ V
Sbjct: 459 ITPLKPSAPKIPIEVLLEATKPTL-PFPWLPETDMKV 494
>pdb|1BTC| Beta-Amylase (E.C.3.2.1.2) Complex With Alpha-Cyclodextrin
(Alpha-14-Maltohydrolase)
Length = 491
Score = 80.9 bits (198), Expect = 2e-15
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+NN+GPP+ ++FG TYLRLS+ L++ N+ FK FV +MHA+ D C +P
Sbjct: 396 PQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD--QDYCANPQKYNHA 453
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+ S P++ I+++L+A P L PFP+ TD+ V
Sbjct: 454 ITPLKPSAPKIPIEVLLEATKPTL-PFPWLPETDMKV 489
>pdb|1BYA| Beta-Amylase (E.C.3.2.1.2)
pdb|1BYB| Beta-Amylase (E.C.3.2.1.2) Reacted With 200 Mm Maltose And
Complexed With Maltotetraose
pdb|1BYC| Beta-Amylase (E.C.3.2.1.2) Reacted With 8 Mm Maltose And Complexed
With Maltotetraose
pdb|1BYD| Beta-Amylase (E.C.3.2.1.2) Reacted With 100 Mm Maltal And
Complexed With 2-Deoxymaltose
Length = 495
Score = 80.9 bits (198), Expect = 2e-15
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+NN+GPP+ ++FG TYLRLS+ L++ N+ FK FV +MHA+ D C +P
Sbjct: 400 PQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD--QDYCANPQKYNHA 457
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+ S P++ I+++L+A P L PFP+ TD+ V
Sbjct: 458 ITPLKPSAPKIPIEVLLEATKPTL-PFPWLPETDMKV 493
>pdb|1BFN| Beta-AmylaseBETA-Cyclodextrin Complex
Length = 495
Score = 80.9 bits (198), Expect = 2e-15
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+NN+GPP+ ++FG TYLRLS+ L++ N+ FK FV +MHA+ D C +P
Sbjct: 400 PQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD--QDYCANPQKYNHA 457
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+ S P++ I+++L+A P L PFP+ TD+ V
Sbjct: 458 ITPLKPSAPKIPIEVLLEATKPTL-PFPWLPETDMKV 493
>sp|O22585|AMYB_MEDSA BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
pir||T09300 beta-amylase (EC 3.2.1.2) - alfalfa
gb|AAD04188.1| (AF026217) beta-amylase [Medicago sativa]
Length = 496
Score = 80.5 bits (197), Expect = 2e-15
Identities = 41/91 (45%), Positives = 62/91 (68%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+N GPP+ ++G TYLRLS+ L++ N+ FK FV +MHA+ D C DP
Sbjct: 401 PQGVNKDGPPKLRMYGVTYLRLSDDLMQQSNFDIFKKFVVKMHAD--QDYCSDPEKYNHG 458
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+RSGP++ D++ +A P + PFP++ TD+ V
Sbjct: 459 IPPLKRSGPKIPDDVLNEATKP-IPPFPWDSETDMKV 494
>dbj|BAA02286.1| (D12882) beta-amylase [Ipomoea batatas]
Length = 499
Score = 75.9 bits (185), Expect = 6e-14
Identities = 39/91 (42%), Positives = 57/91 (61%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P G+N +GPP+ + G TYLRLS+ L++ N+ FK FV +MHA+L P A L+R
Sbjct: 403 PNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMHADLDPSPNAISPAVLER 462
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S +TID +++A PFP+ + TD+PV
Sbjct: 463 SNSAITIDELMEATKGS-RPFPWYDVTDMPV 492
>sp|P10537|AMYB_IPOBA BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
pir||JC1447 beta-amylase (EC 3.2.1.2) - sweet potato
Length = 499
Score = 75.9 bits (185), Expect = 6e-14
Identities = 39/91 (42%), Positives = 57/91 (61%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P G+N +GPP+ + G TYLRLS+ L++ N+ FK FV +MHA+L P A L+R
Sbjct: 403 PNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMHADLDPSPNAISPAVLER 462
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S +TID +++A PFP+ + TD+PV
Sbjct: 463 SNSAITIDELMEATKGS-RPFPWYDVTDMPV 492
>dbj|BAA00828.1| (D01022) beta-amylase [Ipomoea batatas]
Length = 499
Score = 75.9 bits (185), Expect = 6e-14
Identities = 39/91 (42%), Positives = 57/91 (61%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P G+N +GPP+ + G TYLRLS+ L++ N+ FK FV +MHA+L P A L+R
Sbjct: 403 PNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMHADLDPSPNAISPAVLER 462
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S +TID +++A PFP+ + TD+PV
Sbjct: 463 SNSAITIDELMEATKGS-RPFPWYDVTDMPV 492
>pdb|1FA2|A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato
Length = 498
Score = 75.9 bits (185), Expect = 6e-14
Identities = 39/91 (42%), Positives = 57/91 (61%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P G+N +GPP+ + G TYLRLS+ L++ N+ FK FV +MHA+L P A L+R
Sbjct: 402 PNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMHADLDPSPNAISPAVLER 461
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S +TID +++A PFP+ + TD+PV
Sbjct: 462 SNSAITIDELMEATKGS-RPFPWYDVTDMPV 491
>emb|CAA76131.1| (Y16242) beta-amylase [Triticum aestivum]
Length = 598
Score = 69.7 bits (169), Expect = 4e-12
Identities = 39/91 (42%), Positives = 55/91 (59%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVD------P 182
P G++ G P + TYLRL++ L+ G Y FKTFV +MHA+ D C D P
Sbjct: 486 PNGVDLGGVPARRVAAVTYLRLTDELLAGSKYRAFKTFVRKMHAD--QDYCADPAQYHRP 543
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+RS P + +D +L A P E +PF+ TD+ V
Sbjct: 544 LKPLERSRPAVPMDRLLDATTP--EAYPFDPETDMSV 578
>ref|NP_180788.1| putative beta-amylase [Arabidopsis thaliana]
gb|AAC69949.1| (AC005700) putative beta-amylase [Arabidopsis thaliana]
Length = 505
Score = 69.7 bits (169), Expect = 4e-12
Identities = 37/92 (40%), Positives = 59/92 (63%), Gaps = 6/92 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+N G P +FGFTYLRLS+ L+ N+ FK F+ RMHAN + C +P
Sbjct: 395 PNGVNQDGKPR--MFGFTYLRLSDKLLNEPNFSTFKMFLKRMHAN--QEYCSEPERYNHE 450
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPVQ 296
+ PL+RS + +++M ++ P +PFP+ + TD+ ++
Sbjct: 451 LLPLERSRNDESLEMFMEETEP-FDPFPWLDETDMSIR 487
>gb|AAG44882.1|AF284857_1 (AF284857) beta-amylase [Calystegia sepium]
Length = 498
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/91 (40%), Positives = 53/91 (57%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQR 200
P G+N +GPP+ + G TYLRLS+ L+ N+ FK FV +MHA+L P L+R
Sbjct: 402 PNGVNLNGPPKLKMSGLTYLRLSDDLLLKDNFELFKKFVKKMHADLDASPNAISPPVLER 461
Query: 201 SGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
S + ID +L+A FP+ + TD+PV
Sbjct: 462 SNSAIAIDELLEATKVS-RAFPWYDVTDMPV 491
>gb|AAA33941.1| (M92090) beta-amylase [Glycine max]
Length = 474
Score = 64.3 bits (155), Expect = 2e-10
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 6/68 (8%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDP------ 182
P G+NN+GPP+ ++FG TYLRLS+ L++ N+ FK FV +MHA+ D C +P
Sbjct: 401 PQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD--QDYCANPQKYNHA 458
Query: 183 VAPLQRSGPELTID 224
+ PL+ S P++ I+
Sbjct: 459 ITPLKPSAPKIPIE 472
>ref|NP_193256.1| beta-amylase [Arabidopsis thaliana]
pir||S36094 beta-amylase (EC 3.2.1.2) - Arabidopsis thaliana
emb|CAB10300.1| (Z97338) beta-amylase [Arabidopsis thaliana]
emb|CAB78563.1| (AL161540) beta-amylase [Arabidopsis thaliana]
Length = 499
Score = 63.2 bits (152), Expect = 4e-10
Identities = 37/91 (40%), Positives = 55/91 (59%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVD------P 182
P G+N +G P+ ++GFTYLRLS+ + + N+ FK V +MHA+ D C D
Sbjct: 404 PNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKMHAD--QDYCGDAAKYGHE 461
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+ S +LT++ I AA P F ++ TDL V
Sbjct: 462 IVPLKTSNSQLTLEDIADAAQPS-GAFKWDSETDLKV 497
>sp|P25853|AMYB_ARATH BETA-AMYLASE (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE)
gb|AAA32737.1| (M73467) beta-amylase [Arabidopsis thaliana]
prf||1808329A beta amylase [Arabidopsis thaliana]
Length = 498
Score = 63.2 bits (152), Expect = 4e-10
Identities = 37/91 (40%), Positives = 55/91 (59%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVD------P 182
P G+N +G P+ ++GFTYLRLS+ + + N+ FK V +MHA+ D C D
Sbjct: 403 PNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKMHAD--QDYCGDAAKYGHE 460
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+ S +LT++ I AA P F ++ TDL V
Sbjct: 461 IVPLKTSNSQLTLEDIADAAQPS-GAFKWDSETDLKV 496
>dbj|BAA07842.1| (D43783) beta-amylase [Arabidopsis thaliana]
gb|AAB34026.1| (S77076) beta-amylase {EC 3.2.1.2} [Arabidopsis thaliana=thale
cress, Heynh., Peptide, 498 aa]
Length = 498
Score = 60.8 bits (146), Expect = 2e-09
Identities = 36/91 (39%), Positives = 54/91 (58%), Gaps = 6/91 (6%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVD------P 182
P G+N +G P+ ++GFTYLRLS+ + + N+ FK V +MHA+ D C D
Sbjct: 403 PNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKMHAD--QDYCGDAAKYGHE 460
Query: 183 VAPLQRSGPELTIDMILQAAHPKLEPFPFEEHTDLPV 293
+ PL+ S +LT++ I AA P ++ TDL V
Sbjct: 461 IVPLKTSNSQLTLEDIADAAQPS-GALKWDSETDLKV 496
>gb|AAB64177.1| (AF012345) beta-amylase [Hordeum vulgare]
Length = 221
Score = 42.4 bits (98), Expect = 7e-04
Identities = 17/21 (80%), Positives = 18/21 (84%)
Frame = +3
Query: 21 PYGINNSGPPEHNLFGFTYLR 83
P GIN +GPPEH LFGFTYLR
Sbjct: 201 PKGINENGPPEHKLFGFTYLR 221
>ref|NP_191958.1| putative beta-amylase [Arabidopsis thaliana]
pir||T01213 beta-amylase (EC 3.2.1.2) - Arabidopsis thaliana
gb|AAC13634.1| (AF058919) similar to the family of glycosyl hydrolases
[Arabidopsis thaliana]
emb|CAB80858.1| (AL161472) putative beta-amylase [Arabidopsis thaliana]
Length = 527
Score = 38.1 bits (87), Expect = 0.014
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 45 PPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANLPHDPCVDPVAPLQRSGPE 212
P +L FTYLRL+ L+E QN+ F+ F+ RMH D + P Q + PE
Sbjct: 474 PDGRHLSCFTYLRLNPTLMESQNFKEFERFLKRMHGEAVPDLGLAP--GTQETNPE 527
>ref|NP_182112.1| putative beta-amylase [Arabidopsis thaliana]
pir||T02459 beta-amylase homolog F4I18.14 - Arabidopsis thaliana
gb|AAC28536.1| (AC004665) putative beta-amylase [Arabidopsis thaliana]
Length = 687
Score = 35.4 bits (80), Expect = 0.089
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 45 PPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHAN 155
P +L F Y RL L+EG N V F+ FV ++H N
Sbjct: 642 PDRKHLSSFAYSRLVPALMEGHNIVEFERFVKKLHGN 678
>ref|NP_176541.1| unknown protein [Arabidopsis thaliana]
gb|AAF19712.1|AC008047_19 (AC008047) F2K11.11 [Arabidopsis thaliana]
Length = 499
Score = 32.3 bits (72), Expect = 0.75
Identities = 18/44 (40%), Positives = 23/44 (51%)
Frame = +3
Query: 27 GINNSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRMHANL 158
G+ S P G T L S+H EGQN +FK +VD+ H L
Sbjct: 256 GVKTSSPQPLGFNGATTLLPSSH--EGQNISSFKPYVDKSHDEL 297
>pir||D71439 probable Beta-Amylase - Arabidopsis thaliana
Length = 483
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (50%)
Frame = +3
Query: 36 NSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRM 146
N + L FTYLR++ L EGQN+ FV M
Sbjct: 409 NRSDSGNGLTAFTYLRMNKRLFEGQNWQQLVEFVKNM 445
>gb|AAH02424.1|AAH02424 (BC002424) Similar to integral membrane protein 3 [Homo sapiens]
dbj|BAB46927.1| (AB003629) cerebral protein-14 [Homo sapiens]
Length = 267
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 327 QPPHHRCHRGLEPAGRCALQRGMALVLGELLVGS 226
QPP HR RG G C L GM ++L L+ S
Sbjct: 43 QPPQHRSKRGSSVGGVCYLSMGMVVLLMGLVFAS 76
>ref|NP_193442.1| putative beta-amylase [Arabidopsis thaliana]
emb|CAB46051.1| (Z97342) putative beta-amylase [Arabidopsis thaliana]
emb|CAB80980.1| (AL161545) putative beta-amylase [Arabidopsis thaliana]
Length = 498
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (50%)
Frame = +3
Query: 36 NSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRM 146
N + L FTYLR++ L EGQN+ FV M
Sbjct: 424 NRSDSGNGLTAFTYLRMNKRLFEGQNWQQLVEFVKNM 460
>emb|CAB58423.1| (AJ250341) beta-amylase enzyme [Arabidopsis thaliana]
Length = 548
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (50%)
Frame = +3
Query: 36 NSGPPEHNLFGFTYLRLSNHLVEGQNYVNFKTFVDRM 146
N + L FTYLR++ L EGQN+ FV M
Sbjct: 474 NRSDSGNGLTAFTYLRMNKRLFEGQNWQQLVEFVKNM 510
>ref|NP_071880.1| trans-acting transcription factor 5 [Mus musculus]
gb|AAF87798.1|AF279479_1 (AF279479) zinc finger protein Sp5 [Mus musculus]
Length = 398
Score = 31.2 bits (69), Expect = 1.7
Identities = 19/36 (52%), Positives = 21/36 (57%)
Frame = -3
Query: 288 AGRCALQRGMALVLGELLVGSYQSSVLALIFAKAPL 181
A ALQRG LVLG YQS + AL+ KAPL
Sbjct: 231 AAAAALQRG--LVLGPSDFAQYQSQIAALLQTKAPL 264
>ref|NP_112188.1| integral membrane protein 3 [Homo sapiens]
ref|XP_031666.1| integral membrane protein 3 [Homo sapiens]
ref|XP_031663.1| integral membrane protein 3 [Homo sapiens]
sp|Q9NQX7|ITMC_HUMAN INTEGRAL MEMBRANE PROTEIN 2C (TRANSMEMBRANE PROTEIN BRI3)
gb|AAF89492.1|AF272043_1 (AF272043) BRI3 [Homo sapiens]
gb|AAG44792.1|AF271781_1 (AF271781) NPD018 [Homo sapiens]
emb|CAB66538.1| (AL136603) hypothetical protein [Homo sapiens]
Length = 267
Score = 30.8 bits (68), Expect = 2.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 327 QPPHHRCHRGLEPAGRCALQRGMALVLGELLVGS 226
QPP HR RG G C L GM ++L L+ S
Sbjct: 43 QPPQHRSKRGGSVGGVCYLSMGMVVLLMGLVFAS 76
>sp|P35630|ADH1_ENTHI NADP-DEPENDENT ALCOHOL DEHYDROGENASE
pir||A46409 alcohol dehydrogenase (NADP+) (EC 1.1.1.2) - Entamoeba histolytica
gb|AAA51479.1| (M88600) alcohol dehydrogenase [Entamoeba histolytica]
Length = 360
Score = 30.4 bits (67), Expect = 2.9
Identities = 12/37 (32%), Positives = 20/37 (53%)
Frame = -3
Query: 360 NLTHPCHQWGLQPPHHRCHRGLEPAGRCALQRGMALV 250
N+ P +WG+ H H GL P GR +++ +L+
Sbjct: 273 NIDIPRSEWGVGMGHKHIHGGLTPGGRVRMEKLASLI 309
>sp|O13074|HXB4_FUGRU HOMEOBOX PROTEIN HOX-B4 (HOXB-4)
gb|AAB33590.1| Hoxb-4 homeodomain protein [Takifugu rubripes=Japanese puffer fish,
Peptide, 251 aa]
gb|AAC60205.1| (U92575) homeobox protein HOXB-4 [Takifugu rubripes]
Length = 251
Score = 29.6 bits (65), Expect = 4.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 351 HPCHQWGLQPPHHRCHRGLEPAGRCALQRGMAL 253
HP HQ +PP+ +C R +PA RG L
Sbjct: 59 HPQHQQRAEPPYTQCQRAGQPASVVMSPRGHVL 91
>gb|AAK83353.1|AF388363_1 (AF388363) zinc finger buttonhead-related transcription factor 1
[Danio rerio]
Length = 367
Score = 29.3 bits (64), Expect = 6.4
Identities = 21/52 (40%), Positives = 26/52 (49%), Gaps = 3/52 (5%)
Frame = -3
Query: 336 WGLQ---PPHHRCHRGLEPAGRCALQRGMALVLGELLVGSYQSSVLALIFAKAPL 181
W LQ P H H R +QRG LVLG YQ+ + AL+ K+PL
Sbjct: 186 WSLQQGNPVAHSVH-----PHRFPIQRG--LVLGHTDFAQYQTQIAALLHTKSPL 233
>gb|AAF99784.1|AC012463_1 (AC012463) T2E6.3 [Arabidopsis thaliana]
Length = 419
Score = 29.3 bits (64), Expect = 6.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 68 IHLPSVIESSGRGTKLCQFQDLCRQNA 148
+H PS I SS G+ LC+F D+ NA
Sbjct: 71 VHEPSKITSSSCGSSLCKFSDVIYGNA 97
>emb|CAA44232.1| (X62373) hydroxylacyl-CoA dehydrogenase [Streptomyces coelicolor
A3(2)]
emb|CAC37459.1| (AL590942) hydroxylacyl-CoA dehydrogenase [Streptomyces coelicolor]
Length = 146
Score = 29.3 bits (64), Expect = 6.4
Identities = 22/81 (27%), Positives = 43/81 (52%), Gaps = 5/81 (6%)
Frame = -1
Query: 245 VSCL*DHINRQFWP*SLQRRHWINTWVMRQVGMHSVDKGLEIDIVLSLYQMIR*PKVGES 66
++ + + +R+F +QRRHW + + Q S+ +VL+++ ++ P+ G S
Sbjct: 58 ITAVLEDFHRKFDARKIQRRHWFDHTALSQASDGSI-TATSYCLVLTVHADVKAPEFGPS 116
Query: 65 KQI--VLRRAAIVDAI---RHLGRDH 3
+ VL R A + + RH+ DH
Sbjct: 117 CLVHDVLVRGADGELLLRSRHVTHDH 142
>ref|NP_175221.1| hypothetical protein [Arabidopsis thaliana]
Length = 1560
Score = 29.3 bits (64), Expect = 6.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 68 IHLPSVIESSGRGTKLCQFQDLCRQNA 148
+H PS I SS G+ LC+F D+ NA
Sbjct: 71 VHEPSKITSSSCGSSLCKFSDVIYGNA 97
>dbj|BAA24920.1| (AB011023) transposase [Burkholderia glumae]
Length = 401
Score = 29.3 bits (64), Expect = 6.4
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 10 RPRCLMASTIAALLSTICLDSPTFGYRIIW---*RDKTMSISRPLSTECMPTCLMTHVLI 180
+PR + + + + D P++GYR +W R++ + PL+ + + + TH L+
Sbjct: 151 QPRSTHDAPVVEAIERVISDLPSYGYRRVWGTLRRERIAAGQAPLNAKRIYRVMRTHGLL 210
Query: 181 QWR 189
R
Sbjct: 211 MQR 213
>gb|AAG60205.1|AC084763_25 (AC084763) putative chloroplast-targeted beta-amylase [Oryza
sativa]
Length = 544
Score = 28.9 bits (63), Expect = 8.3
Identities = 13/29 (44%), Positives = 18/29 (61%)
Frame = +3
Query: 60 LFGFTYLRLSNHLVEGQNYVNFKTFVDRM 146
L FTYLR++ L +G N+ F +FV M
Sbjct: 475 LGAFTYLRMNKKLFDGDNWRQFVSFVRAM 503
Database: nr
Posted date: Sep 1, 2001 3:31 AM
Number of letters in database: 238,836,854
Number of sequences in database: 750,817
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,107,142
Number of Sequences: 750817
Number of extensions: 3988727
Number of successful extensions: 9128
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 8751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9115
length of database: 238,836,854
effective HSP length: 114
effective length of database: 153,243,716
effective search space used: 3677849184
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)