The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTN 2.2.3 [Apr-24-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Fgr-S3_1_B16_T7.seq Fgr-S3_1_B16_T7 LENGTH:355bp ;
DIRECTION:5 ; CLONE:Fgr-S3_1_B16 ; CLONELIB: n/a
(355 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
1,217,082 sequences; 1,205,879,881 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF326781.1|AF326781 Triticum monococcum actin (ACT-1) ge... 117 8e-24
emb|AJ279852.1|MMU279852 Mus musculus partial mRNA for hypo... 52 4e-04
emb|AJ279847.1|MMU279847 Mus musculus partial mRNA for hypo... 52 4e-04
emb|AJ276855.1|KPN276855 Klebsiella pneumoniae partial SL03... 52 4e-04
emb|AJ290944.2|MMU290944 Mus musculus mRNA for a stretch re... 50 0.002
emb|AJ279846.1|MMU279846 Mus musculus partial mRNA for hypo... 50 0.002
dbj|AB019566.1|AB019566 Homo sapiens mRNA expressed only in... 50 0.002
emb|AJ279849.1|MMU279849 Mus musculus partial mRNA for hypo... 48 0.006
emb|AJ293762.1|ABI293762 Snythetic construct chimeric mRNA ... 48 0.006
emb|AJ293849.1|KPN293849 Klebsiella pneumoniae contig regio... 48 0.006
emb|AJ293848.1|KPN293848 Klebsiella pneumoniae contig regio... 48 0.006
emb|AJ293846.1|KPN293846 Klebsiella pneumoniae transposon T... 48 0.006
emb|AJ276857.1|KPN276857 Klebsiella pneumoniae partial SL04... 48 0.006
emb|AJ276849.1|KPN276849 Klebsiella pneumoniae partial SL01... 48 0.006
emb|AJ276466.1|KPN276466 Klebsiella pneumoniae contig regio... 48 0.006
dbj|AB047592.1|AB047592 Trichophyton mentagrophytes mRNA fo... 48 0.006
dbj|D78130.1|D78130 Homo sapiens mRNA for squalene epoxidas... 48 0.006
dbj|AB019573.1|AB019573 Homo sapiens mRNA expressed only in... 48 0.006
dbj|AB019572.1|AB019572 Homo sapiens mRNA expressed only in... 48 0.006
dbj|AB019570.1|AB019570 Homo sapiens mRNA expressed only in... 48 0.006
dbj|AB019569.1|AB019569 Homo sapiens mRNA expressed only in... 48 0.006
dbj|AB019568.1|AB019568 Homo sapiens mRNA expressed only in... 48 0.006
dbj|AB019562.1|AB019562 Homo sapiens mRNA expressed only in... 48 0.006
gb|AF107491.1|AF107491 Hexamita sp. 46 0.025
gb|AF139835.1|AF139835 Populus tremula x Populus tremuloides 46 0.025
gb|AF072534.1|AF072534 Capsicum annuum 46 0.025
gb|AF002248.2|AF002248 Pisum sativum 46 0.025
gb|AF106660.1|AF106660 Lycopersicon esculentum 46 0.025
emb|AJ279850.1|MMU279850 Mus musculus partial mRNA for hypo... 46 0.025
gb|AF118559.1|AF118559 Avena fatua strain AN265 46 0.025
gb|AF095771.1|AF095771 Homo sapiens 46 0.025
gb|AF061027.1|AF061027 Vernicia fordii 46 0.025
gb|U58918.1|ATU58918 Arabidopsis thaliana MEK kinase (MAP3K... 46 0.025
gb|AF053405.1|AF053405 Mus musculus 46 0.025
gb|AF064741.1|AF064741 Sus scrofa 46 0.025
gb|AF005654.1|AF005654 Homo sapiens 46 0.025
gb|AF051151.1|AF051151 Homo sapiens chromosome 1 map 1q41-q42 46 0.025
dbj|AB013101.1|AB013101 Lycopersicon esculentum LE-ACO4 mRN... 46 0.025
emb|AJ293760.1|ABI293760 Agaricus bisporus mRNA for putativ... 46 0.025
emb|AJ010090.1|ATH010090 Arabidopsis thaliana mRNA for MAP3... 46 0.025
dbj|AB060695.1| Homo sapiens TLR5 mRNA for Toll-like recept... 46 0.025
dbj|AB072357.1|AB072357 Homo sapiens mRNA for hSSH-1B, comp... 46 0.025
emb|AJ009799.1|GGA9799 Gallus gallus mRNA for ABC transport... 46 0.025
dbj|AB044662.1|AB044662 Prunus persica PP-ACS1 mRNA for 1-a... 46 0.025
emb|Y11312.1|HSC2PI3K H.sapiens mRNA for phosphoinositide 3... 46 0.025
emb|Y10552.1|HSNCL3PRT H.sapiens mRNA for calpain-like prot... 46 0.025
ref|NM_139017.1| Homo sapiens similar to CRL3 protein (CRL3... 44 0.097
gb|AF097021.1| Homo sapiens 44 0.097
ref|NM_130806.2| Homo sapiens similar to G protein coupled ... 44 0.097
gb|AC097446.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.097
gb|AF022770.2| Mus musculus strain BALB/c 44 0.097
ref|NM_007227.2| Homo sapiens G protein-coupled receptor 45... 44 0.097
gb|AF403384.2| Homo sapiens chromosome 11 map 11q13 44 0.097
gb|AF075584.1|TGFA2 Homo sapiens transforming growth factor... 44 0.097
gb|AF075583.1|TGFA1 Homo sapiens transforming growth factor... 44 0.097
gb|AF106913.1|AF106913 Homo sapiens CRL3 protein (CRL3) mRN... 44 0.097
gb|AF039086.1|AF039086 Pseudomicrothorax dubius articulin 1... 44 0.097
gb|AF050198.1|AF050198 Homo sapiens 44 0.097
gb|AF074706.1|AF074706 Bos taurus 44 0.097
emb|AJ318062.1|CNE318062 Cryptococcus neoformans mRNA for A... 44 0.097
emb|AJ130894.1|HSA130894 Homo sapiens mRNA for transcriptio... 44 0.097
emb|AJ306902.1|RCO306902 Ricinus communis mRNA for iron tra... 44 0.097
emb|AJ133126.1|RNO33126 Rattus norvegicus mRNA for kelch-li... 44 0.097
gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides 44 0.097
emb|AJ416426.1|MMU416426 Mus musculus mRNA for damaged-DNA ... 44 0.097
gb|AF117260.1|AF117260 Ceratopteris richardii ribosomal pro... 44 0.097
gb|AF026274.1|AF026274 Mus musculus 44 0.097
gb|AF128458.1|AF128458 Homo sapiens 44 0.097
gb|L77146.1|ZEFHSC7R Danio rerio heat shock cognate (hsc70)... 44 0.097
gb|AF012324.1|AF012324 Mus musculus 44 0.097
gb|AF169248.2|AF169248 Opsanus beta 44 0.097
emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integri... 44 0.097
emb|AJ315149.1|OMY315149 Oncorhynchus mykiss mRNA for CC ch... 44 0.097
emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate ox... 44 0.097
gb|AF127772.1|AF127772 Homo sapiens cell-line E8CASS clone ... 44 0.097
gb|AF133731.2|AF133731 Rattus norvegicus strain Copenhagen 44 0.097
gb|AF112153.1|AF112153 Rattus norvegicus 44 0.097
emb|AJ279839.1|MMU279839 Mus musculus partial mRNA for hypo... 44 0.097
gb|U81599.1|HSU81599 Homo sapiens chromosome 17 map 17q21.2 44 0.097
gb|AF125392.1|AF125392 Homo sapiens 44 0.097
gb|AF098517.1|AF098517 Penicillium citrinum strain 52-5 44 0.097
emb|AJ006225.1|MCR6225 Mesembryanthemum crystallinum mRNA f... 44 0.097
gb|U55215.1|CPU55215 Cavia porcellus interleukin-5 receptor... 44 0.097
gb|AF033850.1|AF033850 Homo sapiens 44 0.097
gb|AF067650.1|AF067650 Rattus norvegicus strain Sprague-Dawley 44 0.097
emb|AJ310908.1|FVE310908 Fucus vesiculosus mRNA for ALA deh... 44 0.097
gb|AF039201.1| Pinus caribaea 44 0.097
emb|AJ300524.2|PEU300524 Populus euramericana mRNA for puta... 44 0.097
gb|AF074720.1|AF074720 Dicentrarchus labrax 44 0.097
emb|AJ272202.1|ATH272202 Arabidopsis thaliana mRNA for mito... 44 0.097
gb|AF061514.1|AF061514 Gossypium hirsutum 44 0.097
gb|AF093414.1|AF093414 Saguinus oedipus 44 0.097
gb|AF084928.1|AF084928 Homo sapiens erythroblast macrophage... 44 0.097
gb|AF061266.1|AF061266 Rattus norvegicus strain Sprague-Dawley 44 0.097
gb|AF093139.1|AF093139 Rattus norvegicus strain Sprague Dawley 44 0.097
gb|U77330.1|MMU77330 Mus musculus extracellular matrix prot... 44 0.097
gb|U29343.1|HSU29343 Homo sapiens hyaluronan receptor (RHAM... 44 0.097
emb|AJ252088.1|SDU252088 Solanum dulcamara mRNA for gibbere... 44 0.097
gb|AF038664.1|AF038664 Homo sapiens chromosome 18 map 18q11 44 0.097
gb|AF037989.1|AF037989 Homo sapiens STAT-induced STAT inhib... 44 0.097
emb|AJ293850.1|KPN293850 Klebsiella pneumoniae partial EVGA... 44 0.097
gb|AF079314.1|AF079314 Rattus norvegicus strain Wistar 44 0.097
gb|AF072439.1|AF072439 Rattus norvegicus strain Sprague-Dawley 44 0.097
gb|AF000670.1|AF000670 Homo sapiens chromosome X map Xq26 44 0.097
gb|AF057025.1|AF057025 Rattus norvegicus strain Sprague-Dawley 44 0.097
gb|AF045229.1|AF045229 Homo sapiens 44 0.097
gb|AF042353.1|AF042353 Xenopus laevis 44 0.097
gb|U92642.1|HSU92642 Homo sapiens 44 0.097
gb|AF035119.1|AF035119 Homo sapiens chromosome 8 map 8p21-p22 44 0.097
emb|Y08890.1|HSRANBP5 Homo spaiens mRNA for Ran_GTP binding... 44 0.097
gb|AF024536.1|AF024536 Danio rerio 44 0.097
gb|AF024535.1|AF024535 Danio rerio 44 0.097
emb|AJ293797.1|ATH293797 Arabidopsis thaliana mRNA for SC35... 44 0.097
emb|AJ293759.1|ABI293759 Agaricus bisporus mRNA for putativ... 44 0.097
emb|AJ010750.1|RNO010750 Rattus norvegicus mRNA for Castrat... 44 0.097
emb|AJ278170.1|MMU278170 Mus musculus mRNA for neuronal int... 44 0.097
emb|AJ251833.1|HSA251833 Homo sapiens mRNA for hypothetical... 44 0.097
gb|AF015768.1|AF015768 Mus musculus 44 0.097
emb|Y17775.1|HSY17775 Homo sapiens CACT gene, exon 1 and jo... 44 0.097
emb|AJ251660.1|GTI251660 Girardia tigrina mRNA for homeodom... 44 0.097
gb|U80457.1|HSU80457 Human transcription factor SIM2 short ... 44 0.097
gb|U80456.1|HSU80456 Human transcription factor SIM2 long f... 44 0.097
dbj|AB072429.1| Apis mellifera mRNA for IP3phosphatase, com... 44 0.097
emb|AJ245736.1|DPU245736 Daphnia pulex mRNA for aconitase 44 0.097
gb|U81826.1|RNU81826 Rattus norvegicus clone PG23 mRNA sequ... 44 0.097
emb|AJ238855.1|RNO238855 Rattus norvegicus mRNA for type A/... 44 0.097
emb|AJ238854.1|RNO238854 Rattus norvegicus mRNA for type A/... 44 0.097
gb|S82653.1|S82653 endothelin converting enzyme [guinea pig... 44 0.097
emb|AJ001443.1|HSAJ1443 Homo sapiens mRNA for SAP 130 splic... 44 0.097
emb|AJ011409.1|HSA011409 Homo sapiens mRNA for hypothetical... 44 0.097
gb|U83599.1|HSU83599 Human alternatively spliced death doma... 44 0.097
gb|U66839.1|HSU66839 Human MAP kinase 3b mRNA, complete cds 44 0.097
gb|U61232.1|HSU61232 Human tubulin-folding cofactor E mRNA,... 44 0.097
dbj|AB051296.1|AB051296 Oryza sativa OsNIF3 mRNA for bZIP t... 44 0.097
dbj|AB051294.1|AB051294 Oryza sativa OsNIF1 mRNA for bZIP t... 44 0.097
dbj|AB057371.1|AB057371 Daucus carota CSCP mRNA for cystein... 44 0.097
emb|AJ004937.1|PSAJ4937 Phascolion strombi mRNA for cytopla... 44 0.097
emb|AJ012375.1|HSA012375 Homo sapiens mRNA for SUI1 protein... 44 0.097
gb|U62316.1|RNU62316 Rattus norvegicus strain Wistar 44 0.097
emb|AJ223716.1|SAC223716 Squalus acanthias mRNA for sgk-2 s... 44 0.097
emb|AJ223715.1|SAC223715 Squalus acanthias mRNA for sgk-1 s... 44 0.097
emb|AJ001517.1|RNHERHAEM Rattus norvegicus mRNA for heredit... 44 0.097
dbj|AB017520.1|AB017520 Bombyx mori mRNA for Bacteriophage ... 44 0.097
emb|X97991.1|MMCALCIT M.musculus mRNA for calcitonin 44 0.097
emb|Z93766.1|MDZ93766 M.domestica mRNA; small auxin up-regu... 44 0.097
emb|Z93765.1|MDZ93765 M.domestica mRNA for lignostilbene di... 44 0.097
dbj|AB041734.1|AB041734 Danio rerio orf mRNA, complete cds 44 0.097
dbj|AB040807.1|AB040807 Rattus norvegicus MLS2s mRNA for me... 44 0.097
dbj|AB040991.1|AB040991 Oryctolagus cuniculus mRNA for pros... 44 0.097
emb|Y10319.1|HSCARNCAR H.sapiens mRNA for carnitine carrier 44 0.097
dbj|AB032612.1|AB032612 Pinctada maxima mRNA for N14 matrix... 44 0.097
dbj|AB009308.2|AB009308 Hordeum vulgare mRNA for bpw2, comp... 44 0.097
dbj|AB019046.1|AB019046 Mus musculus mRNA for receptor-acti... 44 0.097
emb|Y12236.1|DECZSD D.rerio mRNA for Cu/Zn-superoxide dismu... 44 0.097
dbj|D88425.1|D88425 Cavia cobaya mRNA for serine/threoine k... 44 0.097
dbj|D87747.1|D87747 Mus musculus mRNA for murine CXCR-4, co... 44 0.097
dbj|AB019574.1|AB019574 Homo sapiens mRNA expressed only in... 44 0.097
emb|AJ000008.1|HSC2PI3KI Homo sapiens mRNA for C2 domain co... 44 0.097
dbj|AB000814.1|AB000814 Homo sapiens mRNA for BMAL1f, parti... 44 0.097
gb|AF245220.1| Homo sapiens 42 0.38
gb|AF042168.1|AF042168 Onchocerca volvulus 42 0.38
gb|AF271776.1|AF271776 Homo sapiens DC48 mRNA, complete cds 42 0.38
gb|AF156489.1|AF156489 Homo sapiens chromosome 7 map 7q11.23 42 0.38
gb|AF151726.1|AF151726 Dianthus caryophyllus clone CFMI-6 42 0.38
emb|AJ293847.1|KPN293847 Klebsiella pneumoniae contig regio... 42 0.38
emb|AJ276853.1|KPN276853 Klebsiella pneumoniae partial SL02... 42 0.38
emb|AJ276850.1|KPN276850 Klebsiella pneumoniae partial SL01... 42 0.38
emb|AJ250102.1|OCU250102 Oryctolagus cuniculus partial mRNA... 42 0.38
emb|Y11883.1|TPRAB3CLP T.pseudospiralis mRNA for rab3C-like... 42 0.38
emb|Y11888.1|TBRAB5AP T.britovi mRNA for rab5A-like protein... 42 0.38
emb|AJ276856.1|KPN276856 Klebsiella pneumoniae partial SL03... 42 0.38
gb|U82540.1|HMU82540 Herdmania momus unknown protein precur... 42 0.38
gb|U63517.1|HMU63517 Herdmania momus serine proteinase (Hms... 42 0.38
dbj|AB075227.1|AB075227 Cucumis melo GeAAT mRNA for alcohol... 42 0.38
dbj|AB051295.1|AB051295 Oryza sativa OsNIF2 mRNA for bZIP t... 42 0.38
emb|AJ001134.1|SRMETPANS Strongyloides ratti mRNA for metal... 42 0.38
dbj|AB019571.1|AB019571 Homo sapiens mRNA expressed only in... 42 0.38
dbj|AB019567.1|AB019567 Homo sapiens mRNA expressed only in... 42 0.38
dbj|AB019563.1|AB019563 Homo sapiens mRNA expressed only in... 42 0.38
gb|AC116600.1| Oryza sativa chromosome 10 clone OSJNAa0036D... 40 1.5
gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, ... 40 1.5
emb|AL354874.14|AL354874 Human DNA sequence from clone RP11... 40 1.5
emb|AL591855.11|AL591855 Human DNA sequence from clone RP11... 40 1.5
emb|AL358292.4|CNS05TDZ Human chromosome 14 DNA sequence BA... 40 1.5
gb|AF007817.1|AF007817 Mus musculus IPL1 and aurora related... 40 1.5
gb|AF158379.1|AF158379 Rattus norvegicus clone 49 strain Wi... 40 1.5
gb|AC005968.1|AC005968 Homo sapiens chromosome 18, clone hR... 40 1.5
gb|AF086824.1|AF086824 Mus musculus 40 1.5
gb|AF086823.1|AF086823 Mus musculus 40 1.5
gb|AF020642.1|AF020642 Homo sapiens clone 13010.B17 40 1.5
emb|AL122003.17|HSJ659I19 Human DNA sequence from clone RP4... 40 1.5
emb|AJ293852.1|KPN293852 Klebsiella pneumoniae partial EVGS... 40 1.5
gb|U26024.1|BTU26024 Bos taurus pigpen mRNA, complete cds 40 1.5
emb|AJ278348.1|HSA278348 Homo sapiens mRNA for pregnancy-as... 40 1.5
gb|AF025848.1|AF025848 Procambarus clarkii 40 1.5
dbj|AB033240.1| Marchantia polymorpha gypsy-type retrotrans... 40 1.5
dbj|AB025624.1|AB025624 Arabidopsis thaliana genomic DNA, c... 40 1.5
gb|AF390573.1| Vibrio cholerae O37 strain 1322-69 38 6.0
gb|AY032925.1| Homo sapiens chromosome 2 map 2q26-q27 38 6.0
ref|NM_138668.1| Mus musculus hypothetical protein MGC7482 ... 38 6.0
gb|AC097522.4| Homo sapiens BAC clone RP11-588F10 from 4, c... 38 6.0
ref|XM_103142.1| Homo sapiens LOC147592 (LOC147592), mRNA 38 6.0
ref|XM_107707.1| Homo sapiens LOC154776 (LOC154776), mRNA 38 6.0
gb|AC022887.10| Homo sapiens chromosome 8, clone RP11-480L1... 38 6.0
gb|AF462229.1| Narcissus pseudonarcissus 38 6.0
gb|AC036125.7| Homo sapiens chromosome 4, clone RP11-482F20... 38 6.0
gb|AC068985.17| Homo sapiens 3 BAC RP11-217E22 (Roswell Par... 38 6.0
gb|AC073273.9| Homo sapiens BAC clone RP11-643A21 from 7, c... 38 6.0
gb|AC073090.8| Homo sapiens BAC clone RP11-328J2 from 7, co... 38 6.0
gb|AC016714.5| Homo sapiens BAC clone RP11-290E5 from 2, co... 38 6.0
gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22,... 38 6.0
gb|AC008597.8| Homo sapiens chromosome 5 clone CTB-102L23, ... 38 6.0
gb|BC005503.1|BC005503 Mus musculus clone MGC:7482 IMAGE:34... 38 6.0
gb|AC017060.7|AC017060 Homo sapiens BAC clone RP11-350D14 f... 38 6.0
gb|AC024564.4|AC024564 Homo sapiens chromosome 5 clone CTC-... 38 6.0
gb|AC078854.16|AC078854 Homo sapiens 3q BAC RP11-480B17 (Ro... 38 6.0
emb|AL589882.10|AL589882 Human DNA sequence from clone RP11... 38 6.0
emb|AL135789.18|AL135789 Human DNA sequence from clone RP11... 38 6.0
gb|AC005997.2|AC005997 Homo sapiens chromosome 7 clone RP4-... 38 6.0
gb|AF139768.1|AF139768 Homo sapiens chromosome 7 map 7q33 38 6.0
gb|AF047707.1|AF047707 Rattus norvegicus strain Sprague-Dawley 38 6.0
gb|AF120321.1|AF120321 Mus musculus clone an01-h01 mRNA seq... 38 6.0
emb|AL031661.28|HS404H4 Human DNA sequence from clone RP3-4... 38 6.0
emb|AL358815.12|AL358815 Human DNA sequence from clone RP11... 38 6.0
emb|AL135839.15|AL135839 Human DNA sequence from clone RP1-... 38 6.0
emb|AJ293853.1|KPN293853 Klebsiella pneumoniae partial YC04... 38 6.0
gb|AC003070.1|AC003070 Homo sapiens chromosome 17, clone HC... 38 6.0
emb|AJ243546.1|RSA243546 Raphanus sativus gene for 67 kD ch... 38 6.0
emb|AJ243544.1|RSA243544 Raphanus sativus gene for 67 kD ch... 38 6.0
emb|AJ292929.1|ABI292929 Agaricus bisporus mRNA for CEL6 pr... 38 6.0
emb|AL163246.2|HS21C046 Homo sapiens chromosome 21 segment ... 38 6.0
emb|AJ250667.1|ACO250667 Ananas comosus mRNA for copper/zin... 38 6.0
emb|AJ006995.1|HSF18108 Homo sapiens chromosome 21 PAC LLNL... 38 6.0
emb|AJ010265.1|GMA010265 Glycine max mRNA for lectin 38 6.0
dbj|AP003193.2|AP003193 Clostridium perfringens DNA, comple... 38 6.0
gb|U32150.1|PGU32150 Pennisetum glaucum Pgr-1 retroelement,... 38 6.0
emb|Z95704.1|HS4PTEL Human DNA sequence from 4PTEL, Hunting... 38 6.0
gb|M32227.1|STRPBP2BB S.oralis penicillin-binding protein 2... 38 6.0
dbj|AB019565.1|AB019565 Homo sapiens mRNA expressed only in... 38 6.0
dbj|AB019564.1|AB019564 Homo sapiens mRNA expressed only in... 38 6.0
>gb|AF326781.1|AF326781 Triticum monococcum actin (ACT-1) gene, partial cds; putative
chromosome condensation factor (CCF), putative resistance
protein (RGA-2), putative resistance protein (RGA2) and
putative nodulin-like-like protein (NLL) gene, complete
cds; and retrotransp>
Length = 211009
Score = 117 bits (59), Expect = 8e-24
Identities = 87/94 (92%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 90 tcgagtcttgtggggaaaagtgcgcaaacctctgcagagtgtataaactaatcatggtta 149
|||||||||||||||||||||| |||||||||||||||||||| ||||||||| | |||
Sbjct: 93493 tcgagtcttgtggggaaaagtgtgcaaacctctgcagagtgta-aaactaatc--gatta 93549
Query: 150 gccgtgtccccggttatggacaatttgagtatct 183
|| |||||||||||||||||||||||||| ||||
Sbjct: 93550 gctgtgtccccggttatggacaatttgagcatct 93583
>emb|AJ279852.1|MMU279852 Mus musculus partial mRNA for hypothetical protein, clone mvx2017
Length = 100
Score = 52.0 bits (26), Expect = 4e-04
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 330 ttgtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||||
Sbjct: 75 ttgtacctgcccgggcggccgctcga 100
>emb|AJ279847.1|MMU279847 Mus musculus partial mRNA for hypothetical protein, clone mvx2005
Length = 256
Score = 52.0 bits (26), Expect = 4e-04
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 330 ttgtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||||
Sbjct: 26 ttgtacctgcccgggcggccgctcga 1
>emb|AJ276855.1|KPN276855 Klebsiella pneumoniae partial SL032 plasmid
Length = 450
Score = 52.0 bits (26), Expect = 4e-04
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 330 ttgtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||||
Sbjct: 400 ttgtacctgcccgggcggccgctcga 425
>emb|AJ290944.2|MMU290944 Mus musculus mRNA for a stretch regulated skeletal muscle protein
(Usmg2 gene)
Length = 239
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 331 tgtacctgcccgggcggccgctcga 355
|||||||||||||||||||||||||
Sbjct: 183 tgtacctgcccgggcggccgctcga 207
>emb|AJ279846.1|MMU279846 Mus musculus partial mRNA for hypothetical protein, clone mvx2002
Length = 140
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 331 tgtacctgcccgggcggccgctcga 355
|||||||||||||||||||||||||
Sbjct: 116 tgtacctgcccgggcggccgctcga 140
>dbj|AB019566.1|AB019566 Homo sapiens mRNA expressed only in placental villi, clone SMAP67
Length = 165
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 331 tgtacctgcccgggcggccgctcga 355
|||||||||||||||||||||||||
Sbjct: 25 tgtacctgcccgggcggccgctcga 1
>emb|AJ279849.1|MMU279849 Mus musculus partial mRNA for hypothetical protein, clone mvx2010
Length = 236
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 213 gtacctgcccgggcggccgctcga 236
>emb|AJ293762.1|ABI293762 Snythetic construct chimeric mRNA for putative endoglucanase (cel5
gene), strain D649
Length = 1074
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 764 gtacctgcccgggcggccgctcga 741
>emb|AJ293849.1|KPN293849 Klebsiella pneumoniae contig region pSL029
Length = 720
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 403 gtacctgcccgggcggccgctcga 426
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcgtggtcgcggccgaggtact 22
||||||||||||||||||||||
Sbjct: 20 gcgtggtcgcggccgaggtact 41
>emb|AJ293848.1|KPN293848 Klebsiella pneumoniae contig region pSL022
Length = 739
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 715 gtacctgcccgggcggccgctcga 738
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcgtggtcgcggccgaggtactg 23
|||||||||||||||||||||||
Sbjct: 32 gcgtggtcgcggccgaggtactg 54
>emb|AJ293846.1|KPN293846 Klebsiella pneumoniae transposon TN3926 partial tra7 gene for
transposase, contig region pSL007
Length = 748
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 54 gtacctgcccgggcggccgctcga 31
Score = 42.1 bits (21), Expect = 0.38
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 gcgtggtcgcggccgaggtac 21
|||||||||||||||||||||
Sbjct: 702 gcgtggtcgcggccgaggtac 682
>emb|AJ276857.1|KPN276857 Klebsiella pneumoniae partial SL049 plasmid
Length = 450
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 29 gtacctgcccgggcggccgctcga 6
>emb|AJ276849.1|KPN276849 Klebsiella pneumoniae partial SL016 plasmid
Length = 450
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 345 gtacctgcccgggcggccgctcga 368
>emb|AJ276466.1|KPN276466 Klebsiella pneumoniae contig region pSL004
Length = 450
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 349 gtacctgcccgggcggccgctcga 372
>dbj|AB047592.1|AB047592 Trichophyton mentagrophytes mRNA for alpha-crystallin-related
protein, complete cds
Length = 457
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 29 gtacctgcccgggcggccgctcga 6
>dbj|D78130.1|D78130 Homo sapiens mRNA for squalene epoxidase, complete cds
Length = 2326
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 51 gtacctgcccgggcggccgctcga 28
>dbj|AB019573.1|AB019573 Homo sapiens mRNA expressed only in placental villi, clone SMAP31
Length = 300
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 331 tgtacctgcccgggcggccgctcg 354
||||||||||||||||||||||||
Sbjct: 277 tgtacctgcccgggcggccgctcg 300
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcgtggtcgcggccgaggta 20
||||||||||||||||||||
Sbjct: 2 gcgtggtcgcggccgaggta 21
>dbj|AB019572.1|AB019572 Homo sapiens mRNA expressed only in placental villi, clone SMAP26
Length = 190
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 167 gtacctgcccgggcggccgctcga 190
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gcgtggtcgcggccgaggt 19
|||||||||||||||||||
Sbjct: 2 gcgtggtcgcggccgaggt 20
>dbj|AB019570.1|AB019570 Homo sapiens mRNA expressed only in placental villi, clone SMAP85
Length = 1044
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgctcga 1
>dbj|AB019569.1|AB019569 Homo sapiens mRNA expressed only in placental villi, clone SMAP84
Length = 237
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 214 gtacctgcccgggcggccgctcga 237
>dbj|AB019568.1|AB019568 Homo sapiens mRNA expressed only in placental villi, clone SMAP83
Length = 1028
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgctcga 1
>dbj|AB019562.1|AB019562 Homo sapiens mRNA expressed only in placental villi, clone SMAP41
Length = 103
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 332 gtacctgcccgggcggccgctcga 355
||||||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgctcga 1
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 gcgtggtcgcggccgaggt 19
|||||||||||||||||||
Sbjct: 102 gcgtggtcgcggccgaggt 84
>gb|AF107491.1|AF107491 Hexamita sp.
Length = 1059
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 1031 tacctgcccgggcggccgctcga 1053
>gb|AF139835.1|AF139835 Populus tremula x Populus tremuloides
Length = 2646
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 65 tacctgcccgggcggccgctcga 43
>gb|AF072534.1|AF072534 Capsicum annuum
Length = 792
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 44 tacctgcccgggcggccgctcga 22
>gb|AF002248.2|AF002248 Pisum sativum
Length = 1152
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 113 tacctgcccgggcggccgctcga 91
>gb|AF106660.1|AF106660 Lycopersicon esculentum
Length = 1446
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 30 tacctgcccgggcggccgctcga 8
>emb|AJ279850.1|MMU279850 Mus musculus partial mRNA for hypothetical protein, clone mvx2011
Length = 256
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 234 tacctgcccgggcggccgctcga 256
>gb|AF118559.1|AF118559 Avena fatua strain AN265
Length = 571
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 23 tacctgcccgggcggccgctcga 1
>gb|AF095771.1|AF095771 Homo sapiens
Length = 2789
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 50 tacctgcccgggcggccgctcga 28
>gb|AF061027.1|AF061027 Vernicia fordii
Length = 1703
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 23 tacctgcccgggcggccgctcga 1
>gb|U58918.1|ATU58918 Arabidopsis thaliana MEK kinase (MAP3Ka) mRNA, complete cds
Length = 2267
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 36 tacctgcccgggcggccgctcga 14
>gb|AF053405.1|AF053405 Mus musculus
Length = 1362
Score = 46.1 bits (23), Expect = 0.025
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 329 tttgtacctgcccgggcggccgctcga 355
|||| ||||||||||||||||||||||
Sbjct: 37 tttgcacctgcccgggcggccgctcga 11
>gb|AF064741.1|AF064741 Sus scrofa
Length = 1976
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 37 tacctgcccgggcggccgctcga 15
>gb|AF005654.1|AF005654 Homo sapiens
Length = 2677
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 23 tacctgcccgggcggccgctcga 1
>gb|AF051151.1|AF051151 Homo sapiens chromosome 1 map 1q41-q42
Length = 3431
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 35 tacctgcccgggcggccgctcga 13
>dbj|AB013101.1|AB013101 Lycopersicon esculentum LE-ACO4 mRNA for
1-aminocyclopropane-1-carboxylate oxidase, complete cds
Length = 1272
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 23 tacctgcccgggcggccgctcga 1
>emb|AJ293760.1|ABI293760 Agaricus bisporus mRNA for putative beta glucosidase (bg1 gene),
strain D649
Length = 2636
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 23 tacctgcccgggcggccgctcga 1
>emb|AJ010090.1|ATH010090 Arabidopsis thaliana mRNA for MAP3K alpha protein kinase
Length = 2189
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 36 tacctgcccgggcggccgctcga 14
>dbj|AB060695.1| Homo sapiens TLR5 mRNA for Toll-like receptor 5, complete cds
Length = 3431
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 35 tacctgcccgggcggccgctcga 13
>dbj|AB072357.1|AB072357 Homo sapiens mRNA for hSSH-1B, complete cds
Length = 1031
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 48 tacctgcccgggcggccgctcga 26
>emb|AJ009799.1|GGA9799 Gallus gallus mRNA for ABC transporter protein
Length = 4018
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 50 tacctgcccgggcggccgctcga 28
>dbj|AB044662.1|AB044662 Prunus persica PP-ACS1 mRNA for 1-aminocyclopropane-1-carboxylate
synthase, complete cds
Length = 1746
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 23 tacctgcccgggcggccgctcga 1
>emb|Y11312.1|HSC2PI3K H.sapiens mRNA for phosphoinositide 3-kinase
Length = 7654
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 37 tacctgcccgggcggccgctcga 15
>emb|Y10552.1|HSNCL3PRT H.sapiens mRNA for calpain-like protease
Length = 1946
Score = 46.1 bits (23), Expect = 0.025
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcga 355
|||||||||||||||||||||||
Sbjct: 37 tacctgcccgggcggccgctcga 15
>ref|NM_139017.1| Homo sapiens similar to CRL3 protein (CRL3), mRNA
Length = 1761
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 37 acctgcccgggcggccgctcga 16
>gb|AF097021.1| Homo sapiens
Length = 2861
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>ref|NM_130806.2| Homo sapiens similar to G protein coupled receptor affecting
testicular descent (H. sapiens) (GREAT), mRNA
Length = 2838
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0034B05,
complete sequence
Length = 175061
Score = 44.1 bits (22), Expect = 0.097
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 148 tagccgtgtccccggttatggacaat 173
||||||||||| ||||||||||||||
Sbjct: 137825 tagccgtgtccacggttatggacaat 137800
>gb|AF022770.2| Mus musculus strain BALB/c
Length = 1543
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 50 acctgcccgggcggccgctcga 29
>ref|NM_007227.2| Homo sapiens G protein-coupled receptor 45 (GPR45), mRNA
Length = 1777
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 40 acctgcccgggcggccgctcga 19
>gb|AF403384.2| Homo sapiens chromosome 11 map 11q13
Length = 2838
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF075584.1|TGFA2 Homo sapiens transforming growth factor alpha precursor (TGFA)
gene, exon 2 and partial cds
Length = 758
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 33 acctgcccgggcggccgctcga 12
>gb|AF075583.1|TGFA1 Homo sapiens transforming growth factor alpha precursor (TGFA)
gene, exon 1
Length = 284
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 247 acctgcccgggcggccgctcga 268
>gb|AF106913.1|AF106913 Homo sapiens CRL3 protein (CRL3) mRNA, complete cds
Length = 1761
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 37 acctgcccgggcggccgctcga 16
>gb|AF039086.1|AF039086 Pseudomicrothorax dubius articulin 1 mRNA, complete cds
Length = 2084
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|AF050198.1|AF050198 Homo sapiens
Length = 1374
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>gb|AF074706.1|AF074706 Bos taurus
Length = 1878
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>emb|AJ318062.1|CNE318062 Cryptococcus neoformans mRNA for ABC-transporter (eCDR1 gene)
Length = 4951
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>emb|AJ130894.1|HSA130894 Homo sapiens mRNA for transcription factor
Length = 3077
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>emb|AJ306902.1|RCO306902 Ricinus communis mRNA for iron transport protein 2 (ipt2 gene)
Length = 483
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>emb|AJ133126.1|RNO33126 Rattus norvegicus mRNA for kelch-like protein
Length = 1963
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 41 acctgcccgggcggccgctcga 20
>gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides
Length = 3572
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 38 acctgcccgggcggccgctcga 17
>emb|AJ416426.1|MMU416426 Mus musculus mRNA for damaged-DNA recognition protein 1 (Ddb1 gene)
Length = 4179
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 3022 acctgcccgggcggccgctcga 3043
>gb|AF117260.1|AF117260 Ceratopteris richardii ribosomal protein I mRNA, complete cds
Length = 846
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF026274.1|AF026274 Mus musculus
Length = 2761
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 2703 acctgcccgggcggccgctcga 2724
>gb|AF128458.1|AF128458 Homo sapiens
Length = 6878
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|L77146.1|ZEFHSC7R Danio rerio heat shock cognate (hsc70) mRNA, complete cds
Length = 2372
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>gb|AF012324.1|AF012324 Mus musculus
Length = 1123
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 41 acctgcccgggcggccgctcga 20
>gb|AF169248.2|AF169248 Opsanus beta
Length = 5989
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 37 acctgcccgggcggccgctcga 16
>emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integrin beta subunit (bint gene)
Length = 4179
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>emb|AJ315149.1|OMY315149 Oncorhynchus mykiss mRNA for CC chemokine
Length = 548
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 333 tacctgcccgggcggccgctcg 354
||||||||||||||||||||||
Sbjct: 22 tacctgcccgggcggccgctcg 1
Score = 42.1 bits (21), Expect = 0.38
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 gcgtggtcgcggccgaggtac 21
|||||||||||||||||||||
Sbjct: 547 gcgtggtcgcggccgaggtac 527
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene)
Length = 934
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|AF127772.1|AF127772 Homo sapiens cell-line E8CASS clone E2L estradiol-induced mRNA
sequence
Length = 2306
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 37 acctgcccgggcggccgctcga 16
>gb|AF133731.2|AF133731 Rattus norvegicus strain Copenhagen
Length = 3744
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF112153.1|AF112153 Rattus norvegicus
Length = 2499
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 53 acctgcccgggcggccgctcga 32
>emb|AJ279839.1|MMU279839 Mus musculus partial mRNA for hypothetical protein, clone mvx11075
Length = 277
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|U81599.1|HSU81599 Homo sapiens chromosome 17 map 17q21.2
Length = 1316
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 46 acctgcccgggcggccgctcga 25
>gb|AF125392.1|AF125392 Homo sapiens
Length = 1394
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF098517.1|AF098517 Penicillium citrinum strain 52-5
Length = 1902
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>emb|AJ006225.1|MCR6225 Mesembryanthemum crystallinum mRNA for small GTP-binding protein
Length = 1028
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|U55215.1|CPU55215 Cavia porcellus interleukin-5 receptor alpha precursor (gpIL-5ra)
mRNA, complete cds
Length = 2634
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF033850.1|AF033850 Homo sapiens
Length = 3388
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>gb|AF067650.1|AF067650 Rattus norvegicus strain Sprague-Dawley
Length = 3106
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 35 acctgcccgggcggccgctcga 14
>emb|AJ310908.1|FVE310908 Fucus vesiculosus mRNA for ALA dehydratase (hemB gene)
Length = 1530
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 56 acctgcccgggcggccgctcga 35
>gb|AF039201.1| Pinus caribaea
Length = 926
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 44 acctgcccgggcggccgctcga 23
>emb|AJ300524.2|PEU300524 Populus euramericana mRNA for putative dehydrin (DHN1 gene)
Length = 1046
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|AF074720.1|AF074720 Dicentrarchus labrax
Length = 430
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>emb|AJ272202.1|ATH272202 Arabidopsis thaliana mRNA for mitochondrial half-ABC transporter
(STA1 gene)
Length = 2452
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 2394 acctgcccgggcggccgctcga 2415
>gb|AF061514.1|AF061514 Gossypium hirsutum
Length = 700
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|AF093414.1|AF093414 Saguinus oedipus
Length = 1602
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 1554 acctgcccgggcggccgctcga 1575
>gb|AF084928.1|AF084928 Homo sapiens erythroblast macrophage protein EMP mRNA, complete cds
Length = 2005
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|AF061266.1|AF061266 Rattus norvegicus strain Sprague-Dawley
Length = 4069
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 54 acctgcccgggcggccgctcga 33
>gb|AF093139.1|AF093139 Rattus norvegicus strain Sprague Dawley
Length = 2304
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 52 acctgcccgggcggccgctcga 31
>gb|U77330.1|MMU77330 Mus musculus extracellular matrix protein precursor SC1 mRNA,
complete cds
Length = 2797
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>gb|U29343.1|HSU29343 Homo sapiens hyaluronan receptor (RHAMM) mRNA, complete cds
Length = 2756
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>emb|AJ252088.1|SDU252088 Solanum dulcamara mRNA for gibberellin 20-oxidase (ga20ox1 gene)
Length = 1539
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 1505 acctgcccgggcggccgctcga 1526
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF038664.1|AF038664 Homo sapiens chromosome 18 map 18q11
Length = 2389
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF037989.1|AF037989 Homo sapiens STAT-induced STAT inhibitor-2 mRNA, complete cds
Length = 1947
Score = 44.1 bits (22), Expect = 0.097
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 334 acctgcccgggcggccgctcga 355
||||||||||||||||||||||
Sbjct: 41 acctgcccgggcggccgctcga 20
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: May 13, 2002 3:54 AM
Number of letters in database: 1,205,879,881
Number of sequences in database: 1,217,082
Lambda K H
1.37 0.711 0.00
Gapped
Lambda K H
1.37 0.711 4.94e-324
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,114,619
Number of Sequences: 1217082
Number of extensions: 1114619
Number of successful extensions: 24694
Number of sequences better than 10.0: 241
length of query: 355
length of database: 5,500,847,177
effective HSP length: 20
effective length of query: 335
effective length of database: 5,476,505,537
effective search space: 1834629354895
effective search space used: 1834629354895
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)