The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTN 2.2.3 [Apr-24-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Fgr-S3_1_C03_T7.seq Fgr-S3_1_C03_T7 LENGTH:387bp ;
DIRECTION:5 ; CLONE:Fgr-S3_1_C03 ; CLONELIB: n/a
(387 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
1,217,082 sequences; 1,205,879,881 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|X63184.1|TAWIS21A T.aestivum DNA for Wis-2-1A retrotran... 507 e-141
gb|AF339051.1|AF339051 Triticum monococcum WIS-2-1A Ty1-cop... 452 e-124
gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete s... 349 1e-93
gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 321 3e-85
gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, comp... 319 1e-84
gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex B... 295 2e-77
gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar More... 276 2e-71
emb|AJ279072.1|HVU279072 Hordeum vulgare BARE-2 and partial... 236 1e-59
gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115... 88 8e-15
gb|AF120181.1|AF120181 Triticum aestivum cultivar Chinese S... 86 3e-14
gb|AF326781.1|AF326781 Triticum monococcum actin (ACT-1) ge... 80 2e-12
emb|Z17327.1|HVBARE1 H.vulgare DNA for BARE-1 copia-like re... 54 1e-04
gb|AF106660.1|AF106660 Lycopersicon esculentum 50 0.002
gb|AF072534.1|AF072534 Capsicum annuum 48 0.007
emb|AJ269530.1|AST269530 Avena strigosa Ty1-copia retrotran... 48 0.007
emb|AJ279850.1|MMU279850 Mus musculus partial mRNA for hypo... 48 0.007
emb|AJ295226.1|HVU295226 Hordeum vulgare retrotransposon BA... 48 0.007
gb|AF064741.1|AF064741 Sus scrofa 48 0.007
gb|AF051151.1|AF051151 Homo sapiens chromosome 1 map 1q41-q42 48 0.007
dbj|AB060695.1| Homo sapiens TLR5 mRNA for Toll-like recept... 48 0.007
dbj|AB044662.1|AB044662 Prunus persica PP-ACS1 mRNA for 1-a... 48 0.007
gb|AF474373.1| Hordeum vulgare subsp. vulgare chromosome 1 ... 46 0.027
gb|AF107491.1|AF107491 Hexamita sp. 46 0.027
gb|AF139835.1|AF139835 Populus tremula x Populus tremuloides 46 0.027
gb|AF002248.2|AF002248 Pisum sativum 46 0.027
emb|AJ290944.2|MMU290944 Mus musculus mRNA for a stretch re... 46 0.027
emb|AJ279852.1|MMU279852 Mus musculus partial mRNA for hypo... 46 0.027
emb|AJ279849.1|MMU279849 Mus musculus partial mRNA for hypo... 46 0.027
emb|AJ279847.1|MMU279847 Mus musculus partial mRNA for hypo... 46 0.027
emb|AJ279846.1|MMU279846 Mus musculus partial mRNA for hypo... 46 0.027
gb|AF118559.1|AF118559 Avena fatua strain AN265 46 0.027
gb|AF095771.1|AF095771 Homo sapiens 46 0.027
gb|AF061027.1|AF061027 Vernicia fordii 46 0.027
gb|U58918.1|ATU58918 Arabidopsis thaliana MEK kinase (MAP3K... 46 0.027
emb|AJ293762.1|ABI293762 Snythetic construct chimeric mRNA ... 46 0.027
gb|AF005654.1|AF005654 Homo sapiens 46 0.027
emb|AJ293849.1|KPN293849 Klebsiella pneumoniae contig regio... 46 0.027
emb|AJ293848.1|KPN293848 Klebsiella pneumoniae contig regio... 46 0.027
emb|AJ293846.1|KPN293846 Klebsiella pneumoniae transposon T... 46 0.027
emb|AJ276857.1|KPN276857 Klebsiella pneumoniae partial SL04... 46 0.027
emb|AJ276855.1|KPN276855 Klebsiella pneumoniae partial SL03... 46 0.027
emb|AJ276849.1|KPN276849 Klebsiella pneumoniae partial SL01... 46 0.027
emb|AJ276466.1|KPN276466 Klebsiella pneumoniae contig regio... 46 0.027
dbj|AB013101.1|AB013101 Lycopersicon esculentum LE-ACO4 mRN... 46 0.027
emb|AJ293760.1|ABI293760 Agaricus bisporus mRNA for putativ... 46 0.027
emb|AJ010090.1|ATH010090 Arabidopsis thaliana mRNA for MAP3... 46 0.027
dbj|AB072357.1|AB072357 Homo sapiens mRNA for hSSH-1B, comp... 46 0.027
emb|AJ009799.1|GGA9799 Gallus gallus mRNA for ABC transport... 46 0.027
dbj|AB047592.1|AB047592 Trichophyton mentagrophytes mRNA fo... 46 0.027
emb|Y11312.1|HSC2PI3K H.sapiens mRNA for phosphoinositide 3... 46 0.027
dbj|D78130.1|D78130 Homo sapiens mRNA for squalene epoxidas... 46 0.027
dbj|AB019572.1|AB019572 Homo sapiens mRNA expressed only in... 46 0.027
dbj|AB019570.1|AB019570 Homo sapiens mRNA expressed only in... 46 0.027
dbj|AB019569.1|AB019569 Homo sapiens mRNA expressed only in... 46 0.027
dbj|AB019568.1|AB019568 Homo sapiens mRNA expressed only in... 46 0.027
dbj|AB019566.1|AB019566 Homo sapiens mRNA expressed only in... 46 0.027
dbj|AB019562.1|AB019562 Homo sapiens mRNA expressed only in... 46 0.027
emb|Y10552.1|HSNCL3PRT H.sapiens mRNA for calpain-like prot... 46 0.027
ref|NM_139017.1| Homo sapiens similar to CRL3 protein (CRL3... 44 0.11
gb|AF097021.1| Homo sapiens 44 0.11
ref|NM_130806.2| Homo sapiens similar to G protein coupled ... 44 0.11
gb|AF022770.2| Mus musculus strain BALB/c 44 0.11
ref|NM_007227.2| Homo sapiens G protein-coupled receptor 45... 44 0.11
gb|AF403384.2| Homo sapiens chromosome 11 map 11q13 44 0.11
gb|AF075584.1|TGFA2 Homo sapiens transforming growth factor... 44 0.11
gb|AF075583.1|TGFA1 Homo sapiens transforming growth factor... 44 0.11
gb|AF106913.1|AF106913 Homo sapiens CRL3 protein (CRL3) mRN... 44 0.11
gb|AF039086.1|AF039086 Pseudomicrothorax dubius articulin 1... 44 0.11
gb|AF050198.1|AF050198 Homo sapiens 44 0.11
gb|AF042168.1|AF042168 Onchocerca volvulus 44 0.11
gb|AF074706.1|AF074706 Bos taurus 44 0.11
emb|AJ318062.1|CNE318062 Cryptococcus neoformans mRNA for A... 44 0.11
emb|AJ130894.1|HSA130894 Homo sapiens mRNA for transcriptio... 44 0.11
emb|AJ306902.1|RCO306902 Ricinus communis mRNA for iron tra... 44 0.11
emb|AJ133126.1|RNO33126 Rattus norvegicus mRNA for kelch-li... 44 0.11
gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides 44 0.11
emb|AJ416426.1|MMU416426 Mus musculus mRNA for damaged-DNA ... 44 0.11
gb|AF117260.1|AF117260 Ceratopteris richardii ribosomal pro... 44 0.11
gb|AF026274.1|AF026274 Mus musculus 44 0.11
gb|AF128458.1|AF128458 Homo sapiens 44 0.11
gb|L77146.1|ZEFHSC7R Danio rerio heat shock cognate (hsc70)... 44 0.11
gb|AF012324.1|AF012324 Mus musculus 44 0.11
gb|AF169248.2|AF169248 Opsanus beta 44 0.11
emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integri... 44 0.11
emb|AJ315149.1|OMY315149 Oncorhynchus mykiss mRNA for CC ch... 44 0.11
emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate ox... 44 0.11
gb|AF127772.1|AF127772 Homo sapiens cell-line E8CASS clone ... 44 0.11
gb|AF133731.2|AF133731 Rattus norvegicus strain Copenhagen 44 0.11
gb|AF112153.1|AF112153 Rattus norvegicus 44 0.11
emb|AJ279839.1|MMU279839 Mus musculus partial mRNA for hypo... 44 0.11
gb|U81599.1|HSU81599 Homo sapiens chromosome 17 map 17q21.2 44 0.11
gb|AF125392.1|AF125392 Homo sapiens 44 0.11
gb|AF098517.1|AF098517 Penicillium citrinum strain 52-5 44 0.11
emb|AJ006225.1|MCR6225 Mesembryanthemum crystallinum mRNA f... 44 0.11
gb|U55215.1|CPU55215 Cavia porcellus interleukin-5 receptor... 44 0.11
gb|AF033850.1|AF033850 Homo sapiens 44 0.11
gb|AF067650.1|AF067650 Rattus norvegicus strain Sprague-Dawley 44 0.11
emb|AJ310908.1|FVE310908 Fucus vesiculosus mRNA for ALA deh... 44 0.11
gb|AF039201.1| Pinus caribaea 44 0.11
gb|AF053405.1|AF053405 Mus musculus 44 0.11
emb|AJ300524.2|PEU300524 Populus euramericana mRNA for puta... 44 0.11
gb|AF074720.1|AF074720 Dicentrarchus labrax 44 0.11
emb|AJ272202.1|ATH272202 Arabidopsis thaliana mRNA for mito... 44 0.11
gb|AF061514.1|AF061514 Gossypium hirsutum 44 0.11
gb|AF093414.1|AF093414 Saguinus oedipus 44 0.11
gb|AF084928.1|AF084928 Homo sapiens erythroblast macrophage... 44 0.11
gb|AF061266.1|AF061266 Rattus norvegicus strain Sprague-Dawley 44 0.11
gb|AF093139.1|AF093139 Rattus norvegicus strain Sprague Dawley 44 0.11
gb|U77330.1|MMU77330 Mus musculus extracellular matrix prot... 44 0.11
gb|U29343.1|HSU29343 Homo sapiens hyaluronan receptor (RHAM... 44 0.11
emb|AJ252088.1|SDU252088 Solanum dulcamara mRNA for gibbere... 44 0.11
gb|AF038664.1|AF038664 Homo sapiens chromosome 18 map 18q11 44 0.11
gb|AF037989.1|AF037989 Homo sapiens STAT-induced STAT inhib... 44 0.11
gb|AF079314.1|AF079314 Rattus norvegicus strain Wistar 44 0.11
gb|AF072439.1|AF072439 Rattus norvegicus strain Sprague-Dawley 44 0.11
gb|AF000670.1|AF000670 Homo sapiens chromosome X map Xq26 44 0.11
gb|AF057025.1|AF057025 Rattus norvegicus strain Sprague-Dawley 44 0.11
gb|AF045229.1|AF045229 Homo sapiens 44 0.11
gb|AF042353.1|AF042353 Xenopus laevis 44 0.11
gb|U92642.1|HSU92642 Homo sapiens 44 0.11
gb|AF035119.1|AF035119 Homo sapiens chromosome 8 map 8p21-p22 44 0.11
emb|Y08890.1|HSRANBP5 Homo spaiens mRNA for Ran_GTP binding... 44 0.11
gb|AF024536.1|AF024536 Danio rerio 44 0.11
gb|AF024535.1|AF024535 Danio rerio 44 0.11
emb|AJ293797.1|ATH293797 Arabidopsis thaliana mRNA for SC35... 44 0.11
emb|AJ293759.1|ABI293759 Agaricus bisporus mRNA for putativ... 44 0.11
emb|AJ010750.1|RNO010750 Rattus norvegicus mRNA for Castrat... 44 0.11
emb|AJ278170.1|MMU278170 Mus musculus mRNA for neuronal int... 44 0.11
emb|AJ251833.1|HSA251833 Homo sapiens mRNA for hypothetical... 44 0.11
gb|AF015768.1|AF015768 Mus musculus 44 0.11
emb|Y17775.1|HSY17775 Homo sapiens CACT gene, exon 1 and jo... 44 0.11
emb|AJ251660.1|GTI251660 Girardia tigrina mRNA for homeodom... 44 0.11
gb|U80457.1|HSU80457 Human transcription factor SIM2 short ... 44 0.11
gb|U80456.1|HSU80456 Human transcription factor SIM2 long f... 44 0.11
dbj|AB072429.1| Apis mellifera mRNA for IP3phosphatase, com... 44 0.11
emb|AJ245736.1|DPU245736 Daphnia pulex mRNA for aconitase 44 0.11
gb|U81826.1|RNU81826 Rattus norvegicus clone PG23 mRNA sequ... 44 0.11
emb|AJ238855.1|RNO238855 Rattus norvegicus mRNA for type A/... 44 0.11
emb|AJ238854.1|RNO238854 Rattus norvegicus mRNA for type A/... 44 0.11
gb|S82653.1|S82653 endothelin converting enzyme [guinea pig... 44 0.11
emb|AJ001443.1|HSAJ1443 Homo sapiens mRNA for SAP 130 splic... 44 0.11
emb|AJ011409.1|HSA011409 Homo sapiens mRNA for hypothetical... 44 0.11
gb|U83599.1|HSU83599 Human alternatively spliced death doma... 44 0.11
gb|U66839.1|HSU66839 Human MAP kinase 3b mRNA, complete cds 44 0.11
gb|U61232.1|HSU61232 Human tubulin-folding cofactor E mRNA,... 44 0.11
dbj|AB051296.1|AB051296 Oryza sativa OsNIF3 mRNA for bZIP t... 44 0.11
dbj|AB051294.1|AB051294 Oryza sativa OsNIF1 mRNA for bZIP t... 44 0.11
dbj|AB057371.1|AB057371 Daucus carota CSCP mRNA for cystein... 44 0.11
emb|AJ004937.1|PSAJ4937 Phascolion strombi mRNA for cytopla... 44 0.11
emb|AJ012375.1|HSA012375 Homo sapiens mRNA for SUI1 protein... 44 0.11
gb|U62316.1|RNU62316 Rattus norvegicus strain Wistar 44 0.11
emb|AJ223716.1|SAC223716 Squalus acanthias mRNA for sgk-2 s... 44 0.11
emb|AJ223715.1|SAC223715 Squalus acanthias mRNA for sgk-1 s... 44 0.11
emb|AJ001517.1|RNHERHAEM Rattus norvegicus mRNA for heredit... 44 0.11
dbj|AB017520.1|AB017520 Bombyx mori mRNA for Bacteriophage ... 44 0.11
emb|X97991.1|MMCALCIT M.musculus mRNA for calcitonin 44 0.11
emb|Z93766.1|MDZ93766 M.domestica mRNA; small auxin up-regu... 44 0.11
emb|Z93765.1|MDZ93765 M.domestica mRNA for lignostilbene di... 44 0.11
dbj|AB041734.1|AB041734 Danio rerio orf mRNA, complete cds 44 0.11
dbj|AB040807.1|AB040807 Rattus norvegicus MLS2s mRNA for me... 44 0.11
dbj|AB040991.1|AB040991 Oryctolagus cuniculus mRNA for pros... 44 0.11
emb|Y10319.1|HSCARNCAR H.sapiens mRNA for carnitine carrier 44 0.11
dbj|AB032612.1|AB032612 Pinctada maxima mRNA for N14 matrix... 44 0.11
dbj|AB009308.2|AB009308 Hordeum vulgare mRNA for bpw2, comp... 44 0.11
dbj|AB019046.1|AB019046 Mus musculus mRNA for receptor-acti... 44 0.11
emb|Y12236.1|DECZSD D.rerio mRNA for Cu/Zn-superoxide dismu... 44 0.11
dbj|D88425.1|D88425 Cavia cobaya mRNA for serine/threoine k... 44 0.11
dbj|D87747.1|D87747 Mus musculus mRNA for murine CXCR-4, co... 44 0.11
dbj|AB019574.1|AB019574 Homo sapiens mRNA expressed only in... 44 0.11
dbj|AB019573.1|AB019573 Homo sapiens mRNA expressed only in... 44 0.11
emb|AJ000008.1|HSC2PI3KI Homo sapiens mRNA for C2 domain co... 44 0.11
dbj|AB000814.1|AB000814 Homo sapiens mRNA for BMAL1f, parti... 44 0.11
gb|AF245220.1| Homo sapiens 42 0.42
gb|AF156489.1|AF156489 Homo sapiens chromosome 7 map 7q11.23 42 0.42
emb|AL591242.4|AL591242 Human DNA sequence from clone RP11-... 42 0.42
emb|Y11883.1|TPRAB3CLP T.pseudospiralis mRNA for rab3C-like... 42 0.42
emb|Y11888.1|TBRAB5AP T.britovi mRNA for rab5A-like protein... 42 0.42
gb|U82540.1|HMU82540 Herdmania momus unknown protein precur... 42 0.42
gb|U63517.1|HMU63517 Herdmania momus serine proteinase (Hms... 42 0.42
dbj|AB075227.1|AB075227 Cucumis melo GeAAT mRNA for alcohol... 42 0.42
dbj|AB051295.1|AB051295 Oryza sativa OsNIF2 mRNA for bZIP t... 42 0.42
emb|AJ001134.1|SRMETPANS Strongyloides ratti mRNA for metal... 42 0.42
dbj|AB019567.1|AB019567 Homo sapiens mRNA expressed only in... 42 0.42
dbj|AB019563.1|AB019563 Homo sapiens mRNA expressed only in... 42 0.42
gb|AF139768.1|AF139768 Homo sapiens chromosome 7 map 7q33 40 1.7
gb|AF007817.1|AF007817 Mus musculus IPL1 and aurora related... 40 1.7
gb|AF158379.1|AF158379 Rattus norvegicus clone 49 strain Wi... 40 1.7
gb|AF086824.1|AF086824 Mus musculus 40 1.7
gb|AF086823.1|AF086823 Mus musculus 40 1.7
gb|AF020642.1|AF020642 Homo sapiens clone 13010.B17 40 1.7
emb|AJ293853.1|KPN293853 Klebsiella pneumoniae partial YC04... 40 1.7
gb|U26024.1|BTU26024 Bos taurus pigpen mRNA, complete cds 40 1.7
emb|AJ278348.1|HSA278348 Homo sapiens mRNA for pregnancy-as... 40 1.7
emb|AJ243546.1|RSA243546 Raphanus sativus gene for 67 kD ch... 40 1.7
emb|AJ243544.1|RSA243544 Raphanus sativus gene for 67 kD ch... 40 1.7
gb|AF025848.1|AF025848 Procambarus clarkii 40 1.7
emb|AJ292929.1|ABI292929 Agaricus bisporus mRNA for CEL6 pr... 40 1.7
gb|AY032925.1| Homo sapiens chromosome 2 map 2q26-q27 38 6.6
ref|NM_016442.2| Homo sapiens type 1 tumor necrosis factor ... 38 6.6
ref|NM_133437.1| Homo sapiens titin (TTN), transcript varia... 38 6.6
gb|AY028807.1| Homo sapiens 38 6.6
gb|AY028806.1| Homo sapiens 38 6.6
ref|NG_000781.1| Drosophila melanogaster (Aac11) on chromo... 38 6.6
ref|NM_058106.2| Drosophila melanogaster (Aac11) transcrip... 38 6.6
gb|AC099681.4| Homo sapiens BAC clone RP11-310H4 from 7, co... 38 6.6
gb|AC091062.5| Homo sapiens chromosome 17, clone RP11-506D1... 38 6.6
ref|XM_051214.2| Homo sapiens type 1 tumor necrosis factor ... 38 6.6
gb|AC015700.8| Homo sapiens chromosome 11, clone RP11-168C2... 38 6.6
gb|AC092013.3| Homo sapiens BAC clone RP11-695L4 from 7, co... 38 6.6
gb|AC023270.7| Homo sapiens BAC clone RP11-88L24 from 2, co... 38 6.6
gb|AC009126.2| Homo sapiens chromosome 5 clone RP11-496M2, ... 38 6.6
gb|AC008699.6| Homo sapiens chromosome 5 clone CTB-73D21, c... 38 6.6
gb|AC010121.7|AC010121 Drosophila melanogaster, chromosome ... 38 6.6
gb|AC008906.5|AC008906 Homo sapiens chromosome 5 clone CTD-... 38 6.6
gb|AF271776.1|AF271776 Homo sapiens DC48 mRNA, complete cds 38 6.6
gb|AE003655.2|AE003655 Drosophila melanogaster genomic scaf... 38 6.6
gb|AC009073.8|AC009073 Homo sapiens chromosome 16 clone RP1... 38 6.6
gb|AC007583.2|F24B9 Arabidopsis thaliana chromosome 1 BAC F... 38 6.6
emb|Z69903.1|CEF46F2 Caenorhabditis elegans cosmid F46F2, c... 38 6.6
emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for ... 38 6.6
gb|AF222340.1|AF222340 Homo sapiens 38 6.6
gb|AF183569.1|AF183569 Homo sapiens 38 6.6
gb|AF106037.1|AF106037 Homo sapiens 38 6.6
gb|AF047707.1|AF047707 Rattus norvegicus strain Sprague-Dawley 38 6.6
gb|AF160921.1|AF160921 Drosophila melanogaster clone LD09852 38 6.6
emb|AL138964.11|AL138964 Human DNA sequence from clone RP11... 38 6.6
gb|AF151726.1|AF151726 Dianthus caryophyllus clone CFMI-6 38 6.6
gb|AC005921.3|AC005921 Homo sapiens chromosome 17, clone hR... 38 6.6
gb|AF120321.1|AF120321 Mus musculus clone an01-h01 mRNA seq... 38 6.6
emb|AL158052.10|AL158052 Human DNA sequence from clone RP11... 38 6.6
emb|AL136991.26|AL136991 Human DNA sequence from clone RP11... 38 6.6
emb|AJ293852.1|KPN293852 Klebsiella pneumoniae partial EVGS... 38 6.6
emb|AJ293850.1|KPN293850 Klebsiella pneumoniae partial EVGA... 38 6.6
emb|AJ293847.1|KPN293847 Klebsiella pneumoniae contig regio... 38 6.6
emb|AJ276853.1|KPN276853 Klebsiella pneumoniae partial SL02... 38 6.6
emb|AJ276850.1|KPN276850 Klebsiella pneumoniae partial SL01... 38 6.6
emb|AJ250102.1|OCU250102 Oryctolagus cuniculus partial mRNA... 38 6.6
emb|AJ276856.1|KPN276856 Klebsiella pneumoniae partial SL03... 38 6.6
dbj|AB011097.2| Homo sapiens mRNA for KIAA0525 protein, par... 38 6.6
emb|AJ250667.1|ACO250667 Ananas comosus mRNA for copper/zin... 38 6.6
emb|AJ010265.1|GMA010265 Glycine max mRNA for lectin 38 6.6
dbj|AB019571.1|AB019571 Homo sapiens mRNA expressed only in... 38 6.6
dbj|AB019565.1|AB019565 Homo sapiens mRNA expressed only in... 38 6.6
dbj|AB019564.1|AB019564 Homo sapiens mRNA expressed only in... 38 6.6
>emb|X63184.1|TAWIS21A T.aestivum DNA for Wis-2-1A retrotransposon-like element
Length = 5114
Score = 507 bits (256), Expect = e-141
Identities = 325/348 (93%)
Strand = Plus / Minus
Query: 22 tatcgaccttgccagccttctcatctaccaagtatctagggtaattctgctctagtgact 81
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 2073 tatcgaccttgccagccttctcatctaccaagtatctagggtaatcttgctccagtggtt 2014
Query: 82 gttccccttattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccac 141
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2013 gttccccttattacagaagcacttagtctcgggtttgggttcaacctcgggtttcttcac 1954
Query: 142 tagagcagcaactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttga 201
|||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1953 tagagcagcagctgatttgccgtttcatgaagtatcccttcttgcccttgcccttcttga 1894
Query: 202 aactagtggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtgg 261
|||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1893 aactagtggtttcaccaaccatcaacaattgatgctccttcttgatttctactttcgcgg 1834
Query: 262 tgtcaaacatcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttca 321
|||||||||||||||||| |||||||| ||||||| | ||||||| |||||||||||||
Sbjct: 1833 tgtcaaacatcgcgaatacctcaaggattatcatatctatccctgatatgttatagttca 1774
Query: 322 tcacgaagctctagcagcttggtggcaatgactttggagaaacatcac 369
||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 1773 tcacgaagctctaacagcttggtggcaatgactttggagaaccatcac 1726
>gb|AF339051.1|AF339051 Triticum monococcum WIS-2-1A Ty1-copia-like retrotransposon, complete
sequence
Length = 9682
Score = 452 bits (228), Expect = e-124
Identities = 319/348 (91%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 22 tatcgaccttgccagccttctcatctaccaagtatctagggtaattctgctctagtgact 81
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||
Sbjct: 4559 tatcgaccttgccagccttcttatctaccaagtatctagggtaattctgctccagtggct 4500
Query: 82 gttccccttattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccac 141
||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 4499 attccccttattacagaagcacttagtctcgggtttgggttcaaccttgggtttcttcat 4440
Query: 142 tagagcagcaactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttga 201
|||||||||| |||| |||| |||||||||||||||||| | |||||||| |||||||
Sbjct: 4439 tagagcagcagctgaattgctttttcatgaagtatccctttgtgcccttgcccttcttga 4380
Query: 202 aactagtggtttaattgaccatcaacaattgatgctcc-ttcttgatttctactttcgtg 260
|||||||||||| | ||||||||||||||||||||| || |||||||||||||||| |
Sbjct: 4379 aactagtggtttcaccaaccatcaacaattgatgctccttttttgatttctactttcgcg 4320
Query: 261 gtgtcaaacatcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttc 320
||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 4319 gtgtcaaacatcgcgaataactcaaggatcatcatatatgtccctgatatattatagttc 4260
Query: 321 atcacgaagctctagcagcttggtggcaatgactttggagaaacatca 368
|||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 4259 atcacgaagctctagcagcttggtggtaatgacttcggagaaacatca 4212
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence
Length = 77136
Score = 349 bits (176), Expect = 1e-93
Identities = 296/336 (88%)
Strand = Plus / Plus
Query: 34 cagccttctcatctaccaagtatctagggtaattctgctctagtgactgttccccttatt 93
||||||||||||||||||||||||||||||| || || ||| || ||||||| ||
Sbjct: 70370 cagccttctcatctaccaagtatctagggtagctccgcctcagttaccattcccctcatg 70429
Query: 94 gcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcagcaac 153
||||||||||||||||||||||||||||||| || |||||||| || ||||||| ||||
Sbjct: 70430 acagaagcacttagtctcgggtttgggttcaatcttgggtttcttcattagagcaacaac 70489
Query: 154 tgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaactagtggttt 213
|| ||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||
Sbjct: 70490 tggtttgctgtttcatgaagtatcccatctagcccttgcccttcttgaaactagtggttt 70549
Query: 214 aattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaacatcg 273
| | ||||||||||||||||||||||||||||||||||| |||| |||||||||| |
Sbjct: 70550 tactaaccatcaacaattgatgctccttcttgatttctaccttcgcaatgtcaaacattg 70609
Query: 274 cgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaagctct 333
||||| | |||||||||||||||| | ||| ||| |||||||||||||||||||||||||
Sbjct: 70610 cgaatttctcaaggatcatcatatctatccttgatatgttatagttcatcacgaagctct 70669
Query: 334 agcagcttggtggcaatgactttggagaaacatcac 369
|||||||| |||||| ||||||||||||| ||||||
Sbjct: 70670 agcagcttagtggcagtgactttggagaaccatcac 70705
Score = 113 bits (57), Expect = 1e-22
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 179 cttcttacccttgcctttcttgaaactagtggtttaattgaccatcaacaattgatgctc 238
||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||
Sbjct: 33945 cttcttacccttgcctttcttgaaactagtggtcttgttgaccatcaacacttgatgctc 33886
Query: 239 cttcttgatttctactt 255
||||||||||||||||
Sbjct: 33885 tttcttgatttctactt 33869
Score = 54.0 bits (27), Expect = 1e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 196 tcttgaaactagtggtttaattgaccatcaacaattgatgctc 238
|||||||||||||||| | ||| |||||||||| |||||||||
Sbjct: 21061 tcttgaaactagtggtcttattcaccatcaacacttgatgctc 21103
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
Length = 261265
Score = 321 bits (162), Expect = 3e-85
Identities = 292/334 (87%), Gaps = 1/334 (0%)
Strand = Plus / Plus
Query: 30 ttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgttcccct 89
||||||||||||| ||||||||||||||||| || || || |||||||||||||||
Sbjct: 234136 ttgccagccttcttatctaccaagtatctagagttgctccgcctcagtgactgttcccct 234195
Query: 90 tattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcag 149
|| |||||||||||||||||||||||||||| || || |||| ||| || ||| ||||
Sbjct: 234196 cgttacagaagcacttagtctcgggtttgggtttaatcttgggtgtcttcattagtgcag 234255
Query: 150 caactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaact-agt 208
|||||| |||||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct: 234256 caactgttttgccgtttcacgaagtatcccttctagcccttgcctttcttgaaacttagt 234315
Query: 209 ggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaa 268
||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 234316 ggttttacaaaccatcaactattgatgctccttcttgatttctactttcgtagtgtcaaa 234375
Query: 269 catcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaa 328
|||||||||| ||||||||||| ||| | ||| ||| ||||||||||||||||||||
Sbjct: 234376 catcgcgaatcgctcaaggatcattgtatgtatccttgatatgttatagttcatcacgaa 234435
Query: 329 gctctagcagcttggtggcaatgactttggagaa 362
||||| ||||||||||||| |||||||||||||
Sbjct: 234436 gctctcacagcttggtggcagtgactttggagaa 234469
Score = 295 bits (149), Expect = 2e-77
Identities = 294/341 (86%), Gaps = 1/341 (0%)
Strand = Plus / Minus
Query: 30 ttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgttcccct 89
||||||| ||||| ||||||||||||||||| || || || |||||||||||||||
Sbjct: 148640 ttgccagtcttcttatctaccaagtatctagagttgctccgcctcagtgactgttcccct 148581
Query: 90 tattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcag 149
||| ||||||||||||||||| |||||||||| || || |||| ||| || ||| ||||
Sbjct: 148580 cattacagaagcacttagtctcaggtttgggtttaatcttgggtctcttcattagtgcag 148521
Query: 150 caactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaact-agt 208
|||||| |||||||||||| |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 148520 caactgttttgccgtttcacgaagtatcccttctagcccttgcctttctcgaaacttagt 148461
Query: 209 ggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaa 268
||||| | | ||||||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct: 148460 ggttttactaaccatcagctattgatgctccttcttgatttctactttcgcagtgtcaaa 148401
Query: 269 catcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaa 328
|||||||||| |||| |||||| ||| | ||| ||| ||||||||||||||||||||
Sbjct: 148400 catcgcgaatcactcaaagatcatagtatctatccttgatatgttatagttcatcacgaa 148341
Query: 329 gctctagcagcttggtggcaatgactttggagaaacatcac 369
||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 148340 gctctcacagcttggtggcagtgactttggagaaccatcac 148300
Score = 289 bits (146), Expect = 1e-75
Identities = 288/334 (86%), Gaps = 1/334 (0%)
Strand = Plus / Minus
Query: 30 ttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgttcccct 89
||||||||||||| ||||||||||||||| | || || || ||||| |||||||||
Sbjct: 246452 ttgccagccttcttatctaccaagtatcttgagttgctccgcctcagtgattgttcccct 246393
Query: 90 tattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcag 149
||| |||||||||||||||||||||||||||| | || |||| ||| || ||| |||
Sbjct: 246392 cattacagaagcacttagtctcgggtttgggttttatcttgggtctcttcattagtgcaa 246333
Query: 150 caactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaact-agt 208
|||||| |||||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct: 246332 caactgttttgccgtttcacgaagtatcccttctagcccttgcctttcttgaaacttagt 246273
Query: 209 ggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaa 268
||||| | ||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 246272 ggttttacaaaccatcaactattgatgctccttcttgatttctactttcgcagtgtcaaa 246213
Query: 269 catcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaa 328
|||||||||| ||||||||||| ||| | ||| ||| ||||||||||||||||||||
Sbjct: 246212 catcgcgaatcgctcaaggatcattgtatgtatccttgatatgttatagttcatcacgaa 246153
Query: 329 gctctagcagcttggtggcaatgactttggagaa 362
||||| ||||||||||||| |||||||||||||
Sbjct: 246152 gctctcacagcttggtggcagtgactttggagaa 246119
Score = 264 bits (133), Expect = 6e-68
Identities = 290/341 (85%), Gaps = 1/341 (0%)
Strand = Plus / Plus
Query: 30 ttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgttcccct 89
||||||||||||| ||||||||||||||||| || || || | |||| ||||||||
Sbjct: 170619 ttgccagccttcttatctaccaagtatctagagttgctccgcctcaatgaccgttcccct 170678
Query: 90 tattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcag 149
|| |||||||||||||||| |||| ||||||| || || |||| ||| || ||| |||
Sbjct: 170679 catagcagaagcacttagtcccgggcttgggtttaatctggggtctcttcattagtgcaa 170738
Query: 150 caactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaact-agt 208
|||||| |||||||||||| |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 170739 caactgctttgccgtttcacgaagtatcccttctagcccttgcctttctcgaaacttagt 170798
Query: 209 ggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaa 268
||||| | | ||||||||| |||||||||||||||||||||| ||||||| |||||||
Sbjct: 170799 ggttttactaaccatcaactattgatgctccttcttgatttcaactttcgcaatgtcaaa 170858
Query: 269 catcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaa 328
|||| ||||| ||||||||||| ||| | ||| ||| ||||||||||||||||||||
Sbjct: 170859 catcacgaatcgctcaaggatcattgtatctatccttgatatgttatagttcatcacgaa 170918
Query: 329 gctctagcagcttggtggcaatgactttggagaaacatcac 369
||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 170919 gctctcacagcttggtggcagtgactttggagaaccatcac 170959
Score = 113 bits (57), Expect = 1e-22
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 179 cttcttacccttgcctttcttgaaactagtggtttaattgaccatcaacaattgatgctc 238
||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||
Sbjct: 163361 cttcttacccttgcctttcttgaaactagtggtcttgttgaccatcaacacttgatgctc 163420
Query: 239 cttcttgatttctactt 255
||||||||||||||||
Sbjct: 163421 tttcttgatttctactt 163437
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
Length = 102433
Score = 319 bits (161), Expect = 1e-84
Identities = 297/341 (87%), Gaps = 1/341 (0%)
Strand = Plus / Plus
Query: 30 ttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgttcccct 89
||||||||||||| ||||||||||||||||| || || || |||||||||||||||
Sbjct: 55943 ttgccagccttcttatctaccaagtatctagagttgctccgcctcagtgactgttcccct 56002
Query: 90 tattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcag 149
||| |||||||||||||||||||||||||||| || || |||| ||| || ||| ||||
Sbjct: 56003 cattacagaagcacttagtctcgggtttgggtttaatcttgggtctcttcattagtgcag 56062
Query: 150 caactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaact-agt 208
|||||| |||||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct: 56063 caactgttttgccgtttcacgaagtatcccttctagcccttgcctttcttgaaacttagt 56122
Query: 209 ggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaa 268
||||| | | ||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 56123 ggttttactaaccatcaactattgatgctccttcttgatttctactttcgcagtgtcaaa 56182
Query: 269 catcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaa 328
||||||| || ||||||||||| ||| | ||| ||| || |||||||||||||||||
Sbjct: 56183 catcgcggatcgctcaaggatcattgtatctatccttgatattttatagttcatcacgaa 56242
Query: 329 gctctagcagcttggtggcaatgactttggagaaacatcac 369
||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 56243 gctctcacagcttggtggcagtgactttggagaaccatcac 56283
Score = 46.1 bits (23), Expect = 0.027
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 196 tcttgaaactagtggtttaattgaccatcaacaattgatgctc 238
||||||||||||||| | ||| |||||||||| |||||||||
Sbjct: 46921 tcttgaaactagtggccttattcaccatcaacacttgatgctc 46879
Score = 40.1 bits (20), Expect = 1.7
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 309 atgttatagttcatcacgaagctctagcagcttggtggca 348
||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 46808 atgttatagttcaacacaaagctcttatagcttggtggca 46769
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete
sequence
Length = 113510
Score = 295 bits (149), Expect = 2e-77
Identities = 294/341 (86%), Gaps = 1/341 (0%)
Strand = Plus / Plus
Query: 30 ttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgttcccct 89
||||||||| || ||||||||||||||||| || || || ||||||||||||||||
Sbjct: 70493 ttgccagcccacttatctaccaagtatctagagttgctccgccttagtgactgttcccct 70552
Query: 90 tattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcag 149
||| ||||||||||||||||||| |||||||| || || |||| ||| || ||| |||
Sbjct: 70553 cattacagaagcacttagtctcggttttgggtttaatcttgggtctcttcattagcgcaa 70612
Query: 150 caactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaact-agt 208
|||||| |||||||||||| |||||||||||||| |||| ||||||||||||||| |||
Sbjct: 70613 caactgttttgccgtttcacgaagtatcccttctagccctcgcctttcttgaaacttagt 70672
Query: 209 ggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaa 268
||||| | | ||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 70673 ggttttactaaccatcaactattgatgctccttcttgatttctactttcgcagtgtcaaa 70732
Query: 269 catcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaa 328
||| |||||| ||||||||||| ||| | ||| ||| ||||||||||||||||||||
Sbjct: 70733 cattgcgaatcgctcaaggatcattgtatctatccttgatatgttatagttcatcacgaa 70792
Query: 329 gctctagcagcttggtggcaatgactttggagaaacatcac 369
||||| ||||||||||||| ||||||||||||| ||||||
Sbjct: 70793 gctctcacagcttggtggcagtgactttggagaaccatcac 70833
Score = 248 bits (125), Expect = 4e-63
Identities = 288/341 (84%), Gaps = 1/341 (0%)
Strand = Plus / Plus
Query: 30 ttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgttcccct 89
|||||| |||||| ||||||||||||||||| || || || |||||| ||||||||
Sbjct: 112422 ttgccaaccttcttatctaccaagtatctagagttgctccgcctcagtgaccgttcccct 112481
Query: 90 tattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcag 149
|| ||||||||||||||| |||| ||||||| || || |||| ||| || ||| || |
Sbjct: 112482 cataacagaagcacttagtcccgggcttgggtttaatctggggtctcttcattagtgctg 112541
Query: 150 caactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaact-agt 208
|||||| |||||||||||| |||||||||||||| |||||||||||| |||| | |||
Sbjct: 112542 caactgctttgccgtttcacgaagtatcccttctagcccttgcctttcccgaaatttagt 112601
Query: 209 ggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaa 268
||||| | | ||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 112602 ggttttactaaccatcaactattgatgctccttcttgatttctactttcgcagtgtcaaa 112661
Query: 269 catcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaa 328
|||||||||| ||||||| ||| ||| | ||| ||| ||||||||||||||||||||
Sbjct: 112662 catcgcgaatcgctcaaggaccattgtatctatccttgatatgttatagttcatcacgaa 112721
Query: 329 gctctagcagcttggtggcaatgactttggagaaacatcac 369
||||| |||||||||| || ||||||||||||| ||||||
Sbjct: 112722 gctctcacagcttggtgacagtgactttggagaaccatcac 112762
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
complete sequence
Length = 102842
Score = 276 bits (139), Expect = 2e-71
Identities = 296/346 (85%), Gaps = 3/346 (0%)
Strand = Plus / Minus
Query: 25 cgaccttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgtt 84
|||| ||||||||||| | ||| |||||| |||||||||| || || |||||| |||
Sbjct: 94054 cgactttgccagccttattatcaaccaagcatctagggtagctccgcctcagtgaccgtt 93995
Query: 85 ccccttattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactag 144
||||| || ||||| ||||||||||||||||||||||||| | |||||||| || |||
Sbjct: 93994 cccctcataacagaatcacttagtctcgggtttgggttcaatcctgggtttcttcattag 93935
Query: 145 agcagcaactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaac 204
||||||||||| |||| |||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 93934 agcagcaactggtttgtcgtttcatgaagtatcccttctagcccttgc--ttcttgaaac 93877
Query: 205 tagtggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgt 264
||||||||| | | |||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 93876 tagtggttttactaaccatcaacaattgatgctccttcttgatttctactcttgcagtgt 93817
Query: 265 caaacatcgcgaatatttcaaggatcatcatatatgtccctgagatg-ttatagttcatc 323
||||||| | |||| | ||| |||||||||| | ||| || ||| ||||||||||||
Sbjct: 93816 caaacattgtgaatcgctaaagcatcatcatatctatcctcgatatgtttatagttcatc 93757
Query: 324 acgaagctctagcagcttggtggcaatgactttggagaaacatcac 369
||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 93756 acgaagctctagcagcttggtggcagtgagtttggagaaccatcac 93711
Score = 260 bits (131), Expect = 1e-66
Identities = 294/347 (84%), Gaps = 1/347 (0%)
Strand = Plus / Plus
Query: 24 tcgaccttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgt 83
||||| |||||||||| || |||||||||| |||||||||| || || |||||| ||
Sbjct: 61482 tcgactttgccagcctacttatctaccaagcatctagggtagctccgcctcagtgaccgt 61541
Query: 84 tccccttattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccacta 143
|||||| || ||||||||||||||||| |||||||||| | || |||| ||| || ||
Sbjct: 61542 tcccctcataacagaagcacttagtctccggtttgggtttagacttgggtctcttcatta 61601
Query: 144 gagcagcaactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaa 203
| |||||||||| ||||| |||||| |||||||||||||| |||||||||||| |||||
Sbjct: 61602 gtgcagcaactgttttgctgtttcacgaagtatcccttctagcccttgcctttcatgaaa 61661
Query: 204 ct-agtggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggt 262
|| |||||||| | | | ||||||| | |||||||||||||||||||||||||||| ||
Sbjct: 61662 cttagtggttttactaagcatcaaccactgatgctccttcttgatttctactttcgcagt 61721
Query: 263 gtcaaacatcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcat 322
|||| ||||| ||||| | ||||||||||| ||| | ||| ||| ||||||||||||||
Sbjct: 61722 gtcatacatcacgaatctctcaaggatcattgtatctatccttgatatgttatagttcat 61781
Query: 323 cacgaagctctagcagcttggtggcaatgactttggagaaacatcac 369
||||||||||| ||||||| ||||| ||||||||||||| ||||||
Sbjct: 61782 cacgaagctctcacagcttgatggcagtgactttggagaaccatcac 61828
Score = 97.6 bits (49), Expect = 8e-18
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 183 ttacccttgcctttcttgaaactagtggtttaattgaccatcaacaattgatgctccttc 242
||||||||||||||||||||||||||||| | || |||||||||| ||||||||| |||
Sbjct: 23230 ttacccttgcctttcttgaaactagtggtcttgtttaccatcaacacttgatgctctttc 23171
Query: 243 ttgatttctactt 255
|||||||||||||
Sbjct: 23170 ttgatttctactt 23158
>emb|AJ279072.1|HVU279072 Hordeum vulgare BARE-2 and partial BAGY-2 retrotransposons
Length = 19906
Score = 236 bits (119), Expect = 1e-59
Identities = 289/343 (84%), Gaps = 2/343 (0%)
Strand = Plus / Minus
Query: 30 ttgccagccttctcatctaccaagtatctagggtaattctgctctagtgactgttcccct 89
||||||||| ||| ||||||||||||||| | || || || ||||| |||||||||
Sbjct: 7457 ttgccagccatcttatctaccaagtatcttgagttgctccgcctcagtgattgttcccct 7398
Query: 90 tattgcagaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcag 149
||| | |||||||||||||||||||||||||| || | |||| ||| || ||| ||||
Sbjct: 7397 cattacggaagcacttagtctcgggtttgggtttaatattgggtctcttcattagtgcag 7338
Query: 150 caactgatttgccgtttcatgaagtatcccttcttacccttgcctttcttgaaac-tagt 208
|||||| |||||||||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 7337 caactgttttgccgtttcacgaagtatcccttctagcccttgcctttcttgaaacttagt 7278
Query: 209 ggtttaattgaccatcaacaattgatgctccttcttgatttctactttcgtggtgtcaaa 268
||||| | ||||||||| ||||| |||||||||||||||||||||||| ||||||||
Sbjct: 7277 ggttttacaaaccatcaactattgacgctccttcttgatttctactttcgcagtgtcaaa 7218
Query: 269 catcgcgaatatttcaaggatcatcatatatgtccctgagatgttatagttcatcacgaa 328
|||| ||||| ||||||||||| ||| | ||| | ||||||||||||||||||||
Sbjct: 7217 catcacgaatcgctcaaggatcattgtatctatcctcaatatgttatagttcatcacgaa 7158
Query: 329 gctctagcagcttggtggcaatgac-tttggagaaacatcacc 370
||||| ||||||||||||| || | ||||||||| |||||||
Sbjct: 7157 gctctcacagcttggtggcagtgtcttttggagaaccatcacc 7115
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
Length = 215241
Score = 87.7 bits (44), Expect = 8e-15
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 194 tttcttgaaactagtggtttaattgaccatcaacaattgatgctccttcttgatttctac 253
|||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct: 212366 tttcttgaaactagtggttttgttaaccatcaacacttgatgctccttcttgatttctac 212307
Score = 65.9 bits (33), Expect = 3e-08
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 183 ttacccttgcctttcttgaaactagtggtttaattgaccatcaacaattgatgctccttc 242
|||||||||||||||||||| ||||||||| ||| |||||||||| || ||| |||||
Sbjct: 114697 ttacccttgcctttcttgaacttagtggttttattcaccatcaacacttcatgttccttt 114638
Query: 243 ttgat 247
|||||
Sbjct: 114637 ttgat 114633
Score = 63.9 bits (32), Expect = 1e-07
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 194 tttcttgaaactagtggtttaattgaccatcaacaattgatgctccttcttgatttctac 253
|||||||||||||||||| | | |||||||||| ||||||||| ||||||||||||||
Sbjct: 2279 tttcttgaaactagtggtcttgtcaaccatcaacacttgatgctctttcttgatttctac 2338
Score = 58.0 bits (29), Expect = 7e-06
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 312 ttatagttcatcacgaagctctagcagcttggtggca 348
|||||||||||||||||||||| | ||||||||||||
Sbjct: 212248 ttatagttcatcacgaagctcttgtagcttggtggca 212212
Score = 52.0 bits (26), Expect = 4e-04
Identities = 135/168 (80%), Gaps = 5/168 (2%)
Strand = Plus / Minus
Query: 96 agaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcagcaactg 155
|||||||||||||||| || || || ||| || ||| |||| |||| |||||||||||
Sbjct: 94676 agaagcacttagtctcaggcttaggatcagacttgggcttcttcacttgagcagcaactt 94617
Query: 156 atttgccgt--ttcatgaagtatcccttcttacccttgcc--tttcttgaaactagtggt 211
||||||| || |||||| |||||||| || ||||| ||||||||||||||||||
Sbjct: 94616 gcttgccgttctttttgaagttccccttcttccctttgcccttttcttgaaactagtggt 94557
Query: 212 ttaattgaccatcaacaattgatgctccttcttgatttctactttcgt 259
| | |||||||||| |||||| | |||||||||||||| |||||
Sbjct: 94556 cttgtcaaccatcaacacttgatg-tttttcttgatttctaccttcgt 94510
Score = 38.2 bits (19), Expect = 6.6
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 312 ttatagttcatcacgaagctcta 334
|||||||||||||||||| ||||
Sbjct: 94457 ttatagttcatcacgaagttcta 94435
>gb|AF120181.1|AF120181 Triticum aestivum cultivar Chinese Spring RAPD-generated marker
sequence amplified with OPI06
Length = 763
Score = 85.7 bits (43), Expect = 3e-14
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 179 cttcttacccttgcctttcttgaaactagtggtttaattgaccatcaacaattgatgctc 238
|||||||||||||||||||||||| | ||||||| |||||||||||||| | |||| ||
Sbjct: 87 cttcttacccttgcctttcttgaacttggtggttttattgaccatcaacactcgatgatc 28
Query: 239 cttcttgatttctac 253
||||||||||||||
Sbjct: 27 tttcttgatttctac 13
>gb|AF326781.1|AF326781 Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
condensation factor (CCF), putative resistance protein
(RGA-2), putative resistance protein (RGA2) and putative
nodulin-like-like protein (NLL) gene, complete cds; and
retrotransp>
Length = 211009
Score = 79.8 bits (40), Expect = 2e-12
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 194 tttcttgaaactagtggtttaattgaccatcaacaattgatgctccttcttgatttctac 253
|||||||||||||||||||| || |||||||||| |||||||||||| |||||||||||
Sbjct: 117836 tttcttgaaactagtggttttgttaaccatcaacacttgatgctcctttttgatttctac 117777
Score = 56.0 bits (28), Expect = 3e-05
Identities = 106/130 (81%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 134 ttctccactagagcagcaactgatttgccgtt--tcatgaagtatcccttcttacccttg 191
|||| |||| ||||||||||| |||||||| || |||||| |||||||| || |||
Sbjct: 136993 ttcttcacttgagcagcaacttgcttgccgttcttcttgaagttccccttcttccctttg 137052
Query: 192 cc--tttcttgaaactagtggtttaattgaccatcaacaattgatgctccttcttgattt 249
|| |||||||||||||||||| | | |||||||||| |||||| | ||||||||||
Sbjct: 137053 cccttttcttgaaactagtggtcttgtcaaccatcaacacttgatgttttttcttgattt 137112
Query: 250 ctactttcgt 259
|||| |||||
Sbjct: 137113 ctaccttcgt 137122
Score = 56.0 bits (28), Expect = 3e-05
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 197 cttgaaactagtggtttaattgaccatcaacaatt-gatgctccttcttgatttctactt 255
||||||||||||||| | || |||||||||| || ||||||| |||||||||||||| |
Sbjct: 37640 cttgaaactagtggtcttgttaaccatcaacactttgatgctctttcttgatttctacct 37699
Query: 256 tcgt 259
||||
Sbjct: 37700 tcgt 37703
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 312 ttatagttcatcacgaagctctagcagcttggtggca 348
|||||||||||||| ||||||| | ||||||||||||
Sbjct: 117718 ttatagttcatcacaaagctcttgtagcttggtggca 117682
Score = 44.1 bits (22), Expect = 0.11
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 312 ttatagttcatcacgaagctctagcagcttggtg 345
|||||||||||||||||| ||||| | |||||||
Sbjct: 37756 ttatagttcatcacgaagttctagtaacttggtg 37789
Score = 38.2 bits (19), Expect = 6.6
Identities = 49/59 (83%)
Strand = Plus / Plus
Query: 96 agaagcacttagtctcgggtttgggttcaacctcgggtttctccactagagcagcaact 154
|||||||||||||||| || || ||| || || ||| |||| |||| |||||||||||
Sbjct: 37533 agaagcacttagtctcaggcttaggtccagacttgggcttcttcacttgagcagcaact 37591
>emb|Z17327.1|HVBARE1 H.vulgare DNA for BARE-1 copia-like retroelement
Length = 13271
Score = 54.0 bits (27), Expect = 1e-04
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 196 tcttgaaactagtggtttaattgaccatcaacaattgatgctc 238
|||||||||||||||| | ||| |||||||||| |||||||||
Sbjct: 4049 tcttgaaactagtggtcttattcaccatcaacacttgatgctc 4007
>gb|AF106660.1|AF106660 Lycopersicon esculentum
Length = 1446
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggtatc 25
|||||||||||||||||||||||||
Sbjct: 8 tcgagcggccgcccgggcaggtatc 32
>gb|AF072534.1|AF072534 Capsicum annuum
Length = 792
Score = 48.1 bits (24), Expect = 0.007
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggtat 24
||||||||||||||||||||||||
Sbjct: 22 tcgagcggccgcccgggcaggtat 45
>emb|AJ269530.1|AST269530 Avena strigosa Ty1-copia retrotransposon TAS1:GAG, AP and IN regions
Length = 2264
Score = 48.1 bits (24), Expect = 0.007
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 188 cttgcctttcttgaaactagtggtttaattgaccatcaacaattgatgctccttcttgat 247
||||||||||||||| | ||||| | |||||||||||||| ||| ||||| || |||||
Sbjct: 1048 cttgcctttcttgaatttggtggtcttattgaccatcaacacttggtgctcttttttgat 989
>emb|AJ279850.1|MMU279850 Mus musculus partial mRNA for hypothetical protein, clone mvx2011
Length = 256
Score = 48.1 bits (24), Expect = 0.007
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggtat 24
||||||||||||||||||||||||
Sbjct: 256 tcgagcggccgcccgggcaggtat 233
>emb|AJ295226.1|HVU295226 Hordeum vulgare retrotransposon BARE-1 partial pseudogene for
gag-protease fusion polyprotein precursor
Length = 1220
Score = 48.1 bits (24), Expect = 0.007
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 196 tcttgaaactagtggtttaattgaccatcaacaattgatg 235
|||||||||||||||| | ||| |||||||||| ||||||
Sbjct: 783 tcttgaaactagtggtcttattcaccatcaacacttgatg 744
>gb|AF064741.1|AF064741 Sus scrofa
Length = 1976
Score = 48.1 bits (24), Expect = 0.007
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggtat 24
||||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggtat 38
>gb|AF051151.1|AF051151 Homo sapiens chromosome 1 map 1q41-q42
Length = 3431
Score = 48.1 bits (24), Expect = 0.007
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggtat 24
||||||||||||||||||||||||
Sbjct: 13 tcgagcggccgcccgggcaggtat 36
>dbj|AB060695.1| Homo sapiens TLR5 mRNA for Toll-like receptor 5, complete cds
Length = 3431
Score = 48.1 bits (24), Expect = 0.007
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggtat 24
||||||||||||||||||||||||
Sbjct: 13 tcgagcggccgcccgggcaggtat 36
>dbj|AB044662.1|AB044662 Prunus persica PP-ACS1 mRNA for 1-aminocyclopropane-1-carboxylate
synthase, complete cds
Length = 1746
Score = 48.1 bits (24), Expect = 0.007
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggtat 24
||||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggtat 24
>gb|AF474373.1| Hordeum vulgare subsp. vulgare chromosome 1 clone BAC 259I16
Length = 124050
Score = 46.1 bits (23), Expect = 0.027
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 196 tcttgaaactagtggtttaattgaccatcaacaattgatgctc 238
|||||||||||||||| | ||| || ||||||| |||||||||
Sbjct: 42401 tcttgaaactagtggtattattcactatcaacacttgatgctc 42443
Score = 38.2 bits (19), Expect = 6.6
Identities = 37/43 (86%)
Strand = Plus / Minus
Query: 196 tcttgaaactagtggtttaattgaccatcaacaattgatgctc 238
|||||||||||||||| | | |||||||||| |||||||||
Sbjct: 32281 tcttgaaactagtggtcttgctcaccatcaacacttgatgctc 32239
>gb|AF107491.1|AF107491 Hexamita sp.
Length = 1059
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1053 tcgagcggccgcccgggcaggta 1031
>gb|AF139835.1|AF139835 Populus tremula x Populus tremuloides
Length = 2646
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 43 tcgagcggccgcccgggcaggta 65
>gb|AF002248.2|AF002248 Pisum sativum
Length = 1152
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 91 tcgagcggccgcccgggcaggta 113
>emb|AJ290944.2|MMU290944 Mus musculus mRNA for a stretch regulated skeletal muscle protein
(Usmg2 gene)
Length = 239
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 207 tcgagcggccgcccgggcaggta 185
>emb|AJ279852.1|MMU279852 Mus musculus partial mRNA for hypothetical protein, clone mvx2017
Length = 100
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 100 tcgagcggccgcccgggcaggta 78
>emb|AJ279849.1|MMU279849 Mus musculus partial mRNA for hypothetical protein, clone mvx2010
Length = 236
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 236 tcgagcggccgcccgggcaggta 214
>emb|AJ279847.1|MMU279847 Mus musculus partial mRNA for hypothetical protein, clone mvx2005
Length = 256
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>emb|AJ279846.1|MMU279846 Mus musculus partial mRNA for hypothetical protein, clone mvx2002
Length = 140
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 140 tcgagcggccgcccgggcaggta 118
>gb|AF118559.1|AF118559 Avena fatua strain AN265
Length = 571
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>gb|AF095771.1|AF095771 Homo sapiens
Length = 2789
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 28 tcgagcggccgcccgggcaggta 50
>gb|AF061027.1|AF061027 Vernicia fordii
Length = 1703
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>gb|U58918.1|ATU58918 Arabidopsis thaliana MEK kinase (MAP3Ka) mRNA, complete cds
Length = 2267
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 14 tcgagcggccgcccgggcaggta 36
>emb|AJ293762.1|ABI293762 Snythetic construct chimeric mRNA for putative endoglucanase (cel5
gene), strain D649
Length = 1074
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 741 tcgagcggccgcccgggcaggta 763
>gb|AF005654.1|AF005654 Homo sapiens
Length = 2677
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>emb|AJ293849.1|KPN293849 Klebsiella pneumoniae contig region pSL029
Length = 720
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 426 tcgagcggccgcccgggcaggta 404
Score = 38.2 bits (19), Expect = 6.6
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 368 acctcggccgcgaccacgc 386
|||||||||||||||||||
Sbjct: 38 acctcggccgcgaccacgc 20
>emb|AJ293848.1|KPN293848 Klebsiella pneumoniae contig region pSL022
Length = 739
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 738 tcgagcggccgcccgggcaggta 716
Score = 38.2 bits (19), Expect = 6.6
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 368 acctcggccgcgaccacgc 386
|||||||||||||||||||
Sbjct: 50 acctcggccgcgaccacgc 32
>emb|AJ293846.1|KPN293846 Klebsiella pneumoniae transposon TN3926 partial tra7 gene for
transposase, contig region pSL007
Length = 748
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 31 tcgagcggccgcccgggcaggta 53
Score = 38.2 bits (19), Expect = 6.6
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 368 acctcggccgcgaccacgc 386
|||||||||||||||||||
Sbjct: 684 acctcggccgcgaccacgc 702
>emb|AJ276857.1|KPN276857 Klebsiella pneumoniae partial SL049 plasmid
Length = 450
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 6 tcgagcggccgcccgggcaggta 28
>emb|AJ276855.1|KPN276855 Klebsiella pneumoniae partial SL032 plasmid
Length = 450
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 425 tcgagcggccgcccgggcaggta 403
>emb|AJ276849.1|KPN276849 Klebsiella pneumoniae partial SL016 plasmid
Length = 450
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 368 tcgagcggccgcccgggcaggta 346
>emb|AJ276466.1|KPN276466 Klebsiella pneumoniae contig region pSL004
Length = 450
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 372 tcgagcggccgcccgggcaggta 350
>dbj|AB013101.1|AB013101 Lycopersicon esculentum LE-ACO4 mRNA for
1-aminocyclopropane-1-carboxylate oxidase, complete cds
Length = 1272
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>emb|AJ293760.1|ABI293760 Agaricus bisporus mRNA for putative beta glucosidase (bg1 gene),
strain D649
Length = 2636
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>emb|AJ010090.1|ATH010090 Arabidopsis thaliana mRNA for MAP3K alpha protein kinase
Length = 2189
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 14 tcgagcggccgcccgggcaggta 36
>dbj|AB072357.1|AB072357 Homo sapiens mRNA for hSSH-1B, complete cds
Length = 1031
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 26 tcgagcggccgcccgggcaggta 48
>emb|AJ009799.1|GGA9799 Gallus gallus mRNA for ABC transporter protein
Length = 4018
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 28 tcgagcggccgcccgggcaggta 50
>dbj|AB047592.1|AB047592 Trichophyton mentagrophytes mRNA for alpha-crystallin-related
protein, complete cds
Length = 457
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 6 tcgagcggccgcccgggcaggta 28
>emb|Y11312.1|HSC2PI3K H.sapiens mRNA for phosphoinositide 3-kinase
Length = 7654
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggta 37
>dbj|D78130.1|D78130 Homo sapiens mRNA for squalene epoxidase, complete cds
Length = 2326
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 28 tcgagcggccgcccgggcaggta 50
>dbj|AB019572.1|AB019572 Homo sapiens mRNA expressed only in placental villi, clone SMAP26
Length = 190
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 190 tcgagcggccgcccgggcaggta 168
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 367 cacctcggccgcgaccacgc 386
||||||||||||||||||||
Sbjct: 21 cacctcggccgcgaccacgc 2
>dbj|AB019570.1|AB019570 Homo sapiens mRNA expressed only in placental villi, clone SMAP85
Length = 1044
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>dbj|AB019569.1|AB019569 Homo sapiens mRNA expressed only in placental villi, clone SMAP84
Length = 237
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 237 tcgagcggccgcccgggcaggta 215
>dbj|AB019568.1|AB019568 Homo sapiens mRNA expressed only in placental villi, clone SMAP83
Length = 1028
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>dbj|AB019566.1|AB019566 Homo sapiens mRNA expressed only in placental villi, clone SMAP67
Length = 165
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
>dbj|AB019562.1|AB019562 Homo sapiens mRNA expressed only in placental villi, clone SMAP41
Length = 103
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggta 23
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 365 atcacctcggccgcgaccacgc 386
||||||||||||||||||||||
Sbjct: 81 atcacctcggccgcgaccacgc 102
>emb|Y10552.1|HSNCL3PRT H.sapiens mRNA for calpain-like protease
Length = 1946
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggta 23
|||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggta 37
>ref|NM_139017.1| Homo sapiens similar to CRL3 protein (CRL3), mRNA
Length = 1761
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 16 tcgagcggccgcccgggcaggt 37
>gb|AF097021.1| Homo sapiens
Length = 2861
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggt 22
>ref|NM_130806.2| Homo sapiens similar to G protein coupled receptor affecting
testicular descent (H. sapiens) (GREAT), mRNA
Length = 2838
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggt 36
>gb|AF022770.2| Mus musculus strain BALB/c
Length = 1543
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 29 tcgagcggccgcccgggcaggt 50
>ref|NM_007227.2| Homo sapiens G protein-coupled receptor 45 (GPR45), mRNA
Length = 1777
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 19 tcgagcggccgcccgggcaggt 40
>gb|AF403384.2| Homo sapiens chromosome 11 map 11q13
Length = 2838
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggt 36
>gb|AF075584.1|TGFA2 Homo sapiens transforming growth factor alpha precursor (TGFA)
gene, exon 2 and partial cds
Length = 758
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 12 tcgagcggccgcccgggcaggt 33
>gb|AF075583.1|TGFA1 Homo sapiens transforming growth factor alpha precursor (TGFA)
gene, exon 1
Length = 284
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 268 tcgagcggccgcccgggcaggt 247
>gb|AF106913.1|AF106913 Homo sapiens CRL3 protein (CRL3) mRNA, complete cds
Length = 1761
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 16 tcgagcggccgcccgggcaggt 37
>gb|AF039086.1|AF039086 Pseudomicrothorax dubius articulin 1 mRNA, complete cds
Length = 2084
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggt 22
>gb|AF050198.1|AF050198 Homo sapiens
Length = 1374
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 28 tcgagcggccgcccgggcaggt 49
>gb|AF042168.1|AF042168 Onchocerca volvulus
Length = 2377
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 gagcggccgcccgggcaggtat 24
||||||||||||||||||||||
Sbjct: 20 gagcggccgcccgggcaggtat 41
>gb|AF074706.1|AF074706 Bos taurus
Length = 1878
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggt 36
>emb|AJ318062.1|CNE318062 Cryptococcus neoformans mRNA for ABC-transporter (eCDR1 gene)
Length = 4951
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggt 22
>emb|AJ130894.1|HSA130894 Homo sapiens mRNA for transcription factor
Length = 3077
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcaggt 22
>emb|AJ306902.1|RCO306902 Ricinus communis mRNA for iron transport protein 2 (ipt2 gene)
Length = 483
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 28 tcgagcggccgcccgggcaggt 49
>emb|AJ133126.1|RNO33126 Rattus norvegicus mRNA for kelch-like protein
Length = 1963
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 20 tcgagcggccgcccgggcaggt 41
>gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides
Length = 3572
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 17 tcgagcggccgcccgggcaggt 38
>emb|AJ416426.1|MMU416426 Mus musculus mRNA for damaged-DNA recognition protein 1 (Ddb1 gene)
Length = 4179
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 3043 tcgagcggccgcccgggcaggt 3022
>gb|AF117260.1|AF117260 Ceratopteris richardii ribosomal protein I mRNA, complete cds
Length = 846
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggt 36
>gb|AF026274.1|AF026274 Mus musculus
Length = 2761
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 2724 tcgagcggccgcccgggcaggt 2703
>gb|AF128458.1|AF128458 Homo sapiens
Length = 6878
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggt 36
>gb|L77146.1|ZEFHSC7R Danio rerio heat shock cognate (hsc70) mRNA, complete cds
Length = 2372
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 28 tcgagcggccgcccgggcaggt 49
>gb|AF012324.1|AF012324 Mus musculus
Length = 1123
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 20 tcgagcggccgcccgggcaggt 41
>gb|AF169248.2|AF169248 Opsanus beta
Length = 5989
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 16 tcgagcggccgcccgggcaggt 37
>emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integrin beta subunit (bint gene)
Length = 4179
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgagcggccgcccgggcaggt 22
||||||||||||||||||||||
Sbjct: 15 tcgagcggccgcccgggcaggt 36
>emb|AJ315149.1|OMY315149 Oncorhynch