The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.3 [Apr-24-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Fgr-S3_1_C16_T7.seq Fgr-S3_1_C16_T7 LENGTH:465bp ;
DIRECTION:5 ; CLONE:Fgr-S3_1_C16 ; CLONELIB: n/a
(465 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
922,381 sequences; 289,601,141 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK51585.1|AC022352_21 (AC022352) Putative retroelement ... 122 2e-51
gb|AAK51574.1|AC022352_10 (AC022352) Putative retroelement ... 120 7e-51
gb|AAK13118.1|AC080019_10 (AC080019) Polyprotein [Oryza sat... 120 7e-51
gb|AAK52160.1|AC084831_14 (AC084831) putative polyprotein [... 120 7e-51
gb|AAM14674.1|AC097446_3 (AC097446) Putative polyprotein [O... 120 7e-51
gb|AAL77166.1|AC091732_17 (AC091732) Putative polyprotein [... 120 7e-51
dbj|BAB61226.1| (AP003257) putative polyprotein [Oryza sati... 119 9e-51
gb|AAM01156.1|AC113336_8 (AC113336) Putative retroelement [... 119 1e-50
gb|AAM08845.1|AC113337_9 (AC113337) Putative retroelement [... 119 1e-50
gb|AAK51582.1|AC022352_18 (AC022352) Putative retroelement ... 118 2e-50
gb|AAK51580.1|AC022352_16 (AC022352) Putative retroelement ... 118 2e-50
gb|AAM01052.1|AC091735_25 (AC091735) Putative retroelement ... 118 2e-50
gb|AAM22721.1|AC092388_5 (AC092388) putative polyprotein [O... 117 3e-50
dbj|BAB61255.1| (AP003315) putative polyprotein [Oryza sati... 117 6e-50
gb|AAL77157.1|AC091732_8 (AC091732) Putative polyprotein [O... 117 5e-49
gb|AAL86497.1|AC099040_1 (AC099040) putative polyprotein [O... 113 1e-48
gb|AAM14679.1|AC097446_8 (AC097446) Putative polyprotein [O... 110 5e-48
dbj|BAB63638.1| (AP003263) putative polyprotein [Oryza sati... 110 8e-48
gb|AAK52162.1|AC084831_16 (AC084831) putative polyprotein [... 112 8e-48
gb|AAL83344.1|AC074282_11 (AC074282) Putative polyprotein [... 110 8e-48
gb|AAK13123.1|AC080019_15 (AC080019) Similar to Transposon ... 109 1e-47
gb|AAM08795.1|AC090486_5 (AC090486) Putative retroelement [... 110 1e-47
gb|AAK92588.1|AC074354_22 (AC074354) Putative retroelement ... 110 1e-47
gb|AAM14695.1|AC097446_24 (AC097446) Putative polyprotein [... 113 1e-47
gb|AAK92604.1|AC078944_15 (AC078944) Putative retroelement ... 109 1e-47
dbj|BAB86165.1| (AP003537) putative polyprotein [Oryza sati... 110 1e-47
gb|AAM01019.1|AC090488_19 (AC090488) Putative retroelement ... 110 1e-47
gb|AAL78097.1|AC093568_7 (AC093568) Putative polyprotein [O... 109 1e-47
gb|AAM00956.1|AC021892_20 (AC021892) Putative polyprotein [... 109 1e-47
gb|AAK92543.1|AC051624_1 (AC051624) Putative retroelement [... 110 1e-47
gb|AAK92560.1|AC051624_18 (AC051624) Putative retroelement ... 112 1e-47
gb|AAL78107.1|AC093568_17 (AC093568) Putative polyprotein [... 109 2e-47
gb|AAL77161.1|AC091732_12 (AC091732) Putative polyprotein [... 109 2e-47
gb|AAD27547.1|AF111709_1 (AF111709) polyprotein [Oryza sati... 109 2e-47
dbj|BAA90795.1| (AP001168) Similar to 22 kDa kafirin cluste... 108 2e-47
gb|AAK92599.1|AC078944_10 (AC078944) Putative retroelement ... 110 2e-47
gb|AAL31081.1|AC091749_10 (AC091749) putative polyprotein [... 108 3e-47
gb|AAM08802.1|AC090486_12 (AC090486) putative retroelement ... 108 7e-47
gb|AAK13121.1|AC080019_13 (AC080019) Similar to Sorghum bic... 105 1e-46
dbj|BAB90703.1| (AP004232) putative Sorghum bicolor 22 kDa ... 106 2e-46
dbj|BAA95869.1| (AP002071) Similar to Sorghum bicolor 22 kD... 106 2e-46
gb|AAL31078.1|AC091749_7 (AC091749) putative polyprotein [O... 106 2e-46
dbj|BAB62635.1| (AP003610) putative polyprotein [Oryza sati... 106 2e-46
gb|AAL86492.1|AC077693_31 (AC077693) putative polyprotein [... 106 2e-46
dbj|BAB84467.1| (AP003546) putative polyprotein [Oryza sati... 108 2e-46
gb|AAL83634.1|AC093017_18 (AC093017) putative polyprotein [... 106 2e-46
gb|AAM14684.1|AC097446_13 (AC097446) Putative polyprotein [... 108 2e-46
gb|AAM00970.1|AC021892_34 (AC021892) Putative retroelement ... 108 3e-46
gb|AAD38284.1|AC007789_10 (AC007789) putative polyprotein [... 110 3e-46
gb|AAM01169.1|AC113336_21 (AC113336) Putative retroelement ... 105 3e-46
dbj|BAB68106.1| (AP003734) putative polyprotein [Oryza sati... 104 3e-46
dbj|BAB85443.1| (AP004031) similar to polyprotein [Oryza sa... 105 5e-46
gb|AAM14693.1|AC097446_22 (AC097446) Putative polyprotein [... 104 8e-46
gb|AAM01160.1|AC113336_12 (AC113336) Putative retroelement ... 104 8e-46
gb|AAM01163.1|AC113336_15 (AC113336) Putative retroelement ... 104 8e-46
gb|AAM01060.1|AC091735_33 (AC091735) Putative retroelement ... 108 8e-46
gb|AAL59229.1|AF448416_9 (AF448416) gag-pol [Zea mays] 105 2e-45
gb|AAK92676.1|AC090714_9 (AC090714) putative polyprotein [O... 106 3e-45
dbj|BAB64173.1| (AP003254) putative polyprotein [Oryza sati... 102 4e-45
gb|AAK13085.1|AC078839_1 (AC078839) Similar to Sorghum bico... 105 4e-45
dbj|BAB63637.1| (AP003263) putative polyprotein [Oryza sati... 104 5e-45
gb|AAM12303.1|AC091680_4 (AC091680) putative polyprotein [O... 104 1e-44
gb|AAD22153.1|AF061282_6 (AF061282) polyprotein [Sorghum bi... 103 1e-44
gb|AAL75746.1|AC091724_19 (AC091724) Putative polyprotein [... 104 1e-44
gb|AAL31683.1|AC092390_4 (AC092390) putative polyprotein [O... 101 2e-44
gb|AAM01007.1|AC090488_7 (AC090488) Putative retroelement [... 107 4e-44
gb|AAM01095.1|AC092748_33 (AC092748) Putative retroelement ... 100 9e-44
dbj|BAA90794.1| (AP001168) Similar to 22 kDa kafirin cluste... 101 3e-43
gb|AAD04177.1| (AF110183) putative integrase [Oryza sativa] 101 3e-43
gb|AAL69439.1|AC098565_21 (AC098565) Putative polyprotein [... 108 4e-42
gb|AAM01170.1|AC113336_22 (AC113336) Putative retroelement ... 101 1e-41
gb|AAK00448.1|AC060755_18 (AC060755) putative gypsy-type re... 95 5e-41
gb|AAM01143.1|AC108884_25 (AC108884) Putative retroelement ... 99 7e-40
gb|AAD22158.1|AF061282_11 (AF061282) polyprotein [Sorghum b... 95 1e-39
gb|AAK51588.1|AC022352_24 (AC022352) Putative gypsy-like re... 99 6e-35
pir||T07863 probable polyprotein - pineapple retrotransposo... 85 7e-34
emb|CAC44142.1| (AJ411810) putative polyprotein [Cicer arie... 88 1e-33
gb|AAM12313.1|AC091680_14 (AC091680) putative polyprotein [... 88 2e-32
ref|NP_178861.1| (NM_126820) putative retroelement pol poly... 78 5e-31
gb|AAF67363.1| (AF262041) Hypothetical protein T32B20.f [Ar... 82 7e-31
gb|AAM01108.1|AC098682_12 (AC098682) Putative Sorghum bicol... 80 9e-31
gb|AAK92672.1|AC090714_5 (AC090714) putative polyprotein [O... 104 5e-30
gb|AAM14678.1|AC097446_7 (AC097446) Putative polyprotein [O... 100 2e-29
ref|NP_189740.1| (NM_114020) hypothetical protein [Arabidop... 77 2e-29
ref|NP_192525.1| (NM_116855) putative reverse transcriptase... 79 6e-29
ref|NP_178767.1| (NM_126726) putative retroelement pol poly... 76 8e-29
ref|NP_193423.1| (NM_117793) retrotransposon like protein [... 73 1e-26
ref|NP_178686.1| (NM_126644) putative retroelement pol poly... 77 4e-24
ref|NP_192293.1| (NM_116622) putative transposon protein [A... 74 4e-23
gb|AAM01049.1|AC091735_22 (AC091735) putative polyprotein [... 101 3e-22
pir||T01842 hypothetical protein F9D12.11 - Arabidopsis tha... 75 1e-21
gb|AAM14686.1|AC097446_15 (AC097446) Putative polyprotein [... 101 3e-21
gb|AAL69435.1|AC098565_17 (AC098565) Putative polyprotein [... 99 2e-20
gb|AAD17358.1| (AF128395) contains similarity to reverse tr... 80 3e-20
gb|AAF18642.1|AC006228_13 (AC006228) F5J5.15 [Arabidopsis t... 79 4e-20
ref|NP_174846.1| (NM_103310) polyprotein, putative [Arabido... 79 4e-20
gb|AAL69429.1|AC098565_11 (AC098565) Putative polyprotein [... 89 5e-20
gb|AAM22006.1|AC093178_1 (AC093178) Putative polyprotein [O... 89 5e-20
gb|AAK13122.1|AC080019_14 (AC080019) Polyprotein [Oryza sat... 96 1e-19
gb|AAM14672.1|AC097446_1 (AC097446) Putative polyprotein [O... 95 2e-19
gb|AAK52169.1|AC084831_23 (AC084831) putative polyprotein [... 95 2e-19
ref|NP_192796.1| (NM_117126) putative reverse-transcriptase... 66 1e-18
gb|AAM08851.1|AC113337_15 (AC113337) Putative retroelement ... 88 3e-17
pir||T17459 polyprotein - tomato >gi|4235644|gb|AAD13304.1|... 56 3e-17
gb|AAM22834.1|AF427791_26 (AF427791) Sukkula-1a polyprotein... 86 1e-16
gb|AAM22833.1|AF427791_25 (AF427791) Sukkula-1b polyprotein... 86 1e-16
gb|AAL79340.1|AC099402_4 (AC099402) Putative 22 kDa kafirin... 86 1e-16
pir||T18348 probable pol polyprotein, truncated - rice blas... 55 2e-16
dbj|BAA78625.1| (AB028236) Pol (reverse transcriptase-RNase... 58 2e-16
dbj|BAB68011.1| (AP003337) putative polyprotein [Oryza sati... 57 4e-16
ref|NP_178544.1| (NM_126496) putative retroelement pol poly... 83 4e-16
gb|AAG13430.1|AC051634_11 (AC051634) putative plant disease... 56 1e-15
pir||A36373 hypothetical protein Tf1 - fission yeast (Schi... 55 1e-15
gb|AAL82521.1|AC084766_7 (AC084766) putative polyprotein [O... 53 2e-15
ref|NP_596839.1| (NC_003423) retrotransposable element; tf2... 55 3e-15
ref|NP_587955.1| (NC_003421) TF2 type transposable element ... 55 3e-15
ref|NP_593347.1| (NC_003424) retrotransposable element tf2 ... 55 3e-15
pir||T39868 retrotransposable element - fission yeast (Schi... 55 3e-15
ref|NP_594897.1| (NC_003424) retrotransposable element Tf2-... 55 3e-15
ref|NP_593385.1| (NC_003424) tf2-type transposon [Schizosac... 55 3e-15
gb|AAK91332.1|AC090441_14 (AC090441) Putative gag-pol polyp... 59 4e-15
dbj|BAA95881.1| (AP002071) Similar to Lycopersicon esculent... 54 4e-15
gb|AAK94516.1| (AY040832) gag-pol polyprotein [Hordeum vulg... 59 5e-15
gb|AAK94517.1| (AY040832) gag-pol polyprotein [Hordeum vulg... 59 5e-15
gb|AAK13116.1|AC080019_8 (AC080019) polyprotein [Oryza sati... 80 5e-15
ref|NP_179072.1| (NM_127029) putative retroelement pol poly... 74 1e-14
dbj|BAA89466.1| (AB033235) gag-pol polyprotein [Oryza sativ... 59 1e-14
gb|AAF79797.1|AC020646_20 (AC020646) T32E20.30 [Arabidopsis... 53 1e-14
dbj|BAA81778.1| (AP000364) Similar to Transposon MAGGY gag ... 77 6e-14
gb|AAL76001.1|AF466646_9 (AF466646) putative gag-pol polypr... 51 7e-14
gb|AAM08860.1|AC113339_6 (AC113339) Putative retroelement [... 57 7e-14
emb|CAC33015.1| (AJ300474) hypothetical protein [Antirrhinu... 76 1e-13
gb|AAG13508.1|AC068924_13 (AC068924) putative gag-pol polyp... 50 1e-13
gb|AAL79762.1|AC096687_26 (AC096687) putative polyprotein [... 51 1e-13
gb|AAK82434.1|AC091247_1 (AC091247) putative polyprotein, 5... 51 1e-13
gb|AAL68644.1|AF458768_1 (AF458768) polyprotein [Oryza sati... 49 3e-13
ref|NP_174769.1| (NM_103233) gypsy/Ty3 element polyprotein,... 49 4e-12
dbj|BAA89272.1| (AB025309) Pol [Alternaria alternata] 46 4e-12
gb|AAK98732.1|AC090485_11 (AC090485) Putative retroelement ... 50 6e-12
gb|AAF13073.1|AC011621_1 (AC011621) putative retroelement p... 49 7e-12
prf||1510387A retrotransposon del1-46 [Lilium henryi] 70 1e-11
ref|NP_178629.1| (NM_126584) putative retroelement pol poly... 50 2e-11
ref|NP_566407.1| (NM_112031) gypsy/Ty-3 retroelement polypr... 49 4e-11
gb|AAK92688.1|AC090714_21 (AC090714) putative polyprotein [... 67 5e-11
ref|NP_178711.1| (NM_126669) putative retroelement integras... 49 6e-11
gb|AAK92650.1|AC079634_11 (AC079634) Putative retroelement ... 67 8e-11
gb|AAK98731.1|AC090485_10 (AC090485) Putative retroelement ... 55 1e-10
gb|AAK01619.1|AF314096_2 (AF314096) polymerase [Magnaporthe... 48 1e-10
gb|AAK55448.1|AC069300_3 (AC069300) putative polyprotein [O... 53 8e-10
ref|NP_174872.1| (NM_103335) polyprotein, putative [Arabido... 49 1e-09
gb|AAF79348.1|AC007887_7 (AC007887) F15O4.13 [Arabidopsis t... 62 2e-09
ref|NP_174802.1| (NM_103266) polyprotein, putative [Arabido... 62 2e-09
emb|CAA97115.1| (Z72894) TY3B [Saccharomyces cerevisiae] >g... 54 2e-09
pir||S69842 TyB protein - yeast (Saccharomyces cerevisiae) ... 54 2e-09
ref|NP_011624.1| (NC_001139) TyB Gag-Pol protein; Ygr109w-b... 54 2e-09
ref|NP_012184.1| (NC_001141) Hypothetical ORF; Yil082w-ap [... 54 2e-09
pir||S53577 TyB protein - yeast (Saccharomyces cerevisiae) ... 54 2e-09
gb|AAA98435.1| (M34549) POL3 [Saccharomyces cerevisiae] 54 2e-09
gb|AAA35184.1| (M23367) has homology to retroviral pol gene... 54 2e-09
emb|CAA86713.1| (Z46728) YI9910.15, incomplete TY3-2 orfB, ... 54 2e-09
ref|NP_192527.1| (NM_116857) putative polyprotein [Arabidop... 61 3e-09
gb|AAK92545.1|AC051624_3 (AC051624) Putative retroelement [... 50 5e-09
gb|AAM00954.1|AC021892_18 (AC021892) Putative retroelement ... 60 6e-09
dbj|BAA89559.1| (AP001072) Similar to polyprotein. (AF06128... 51 8e-09
gb|AAL75999.1|AF466646_7 (AF466646) putative polyprotein [Z... 49 1e-08
dbj|BAB17336.1| (AP002747) putative polyprotein [Oryza sati... 54 3e-08
gb|AAC33526.2| (AF030881) pol polyprotein [Takifugu rubripes] 58 4e-08
gb|AAG24792.1|AF264028_2 (AF264028) pol protein [Glomerella... 53 5e-08
pir||S60179 pol polyprotein homolog - fungus (Fusarium oxys... 56 1e-07
gb|AAK70635.1|AC091238_13 (AC091238) Putative polyprotein [... 55 2e-07
emb|CAB39733.1| (AJ133521) protease, reverse transcriptase,... 43 4e-07
dbj|BAB63791.1| (AP003607) putative retroelement pol polypr... 53 1e-06
gb|AAL82656.1|AC092387_4 (AC092387) putative gag-pol polypr... 52 3e-06
pir||S52564 hypothetical protein 2 (clone Db314) - fruit fl... 40 4e-06
gb|AAM01152.1|AC113336_4 (AC113336) Putative retroelement [... 49 1e-05
dbj|BAB83836.1| (AB073376) LTR retrotransposable element~pa... 37 4e-05
emb|CAD29542.1| (AJ439555) contains protease, reverse trans... 34 7e-05
ref|NP_491240.1| (NM_058839) T03F1.4.p [Caenorhabditis eleg... 40 9e-05
ref|NP_178679.1| (NM_126637) putative retroelement pol poly... 46 1e-04
gb|AAM12274.1| (AY095181) GM07634p [Drosophila melanogaster] 44 4e-04
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein fro... 44 4e-04
ref|NP_495557.1| (NM_063156) POL Polyprotein (reverse trans... 39 6e-04
dbj|BAB02140.1| (AP000411) contains similarity to reverse t... 40 6e-04
pir||T18350 probable pol polyprotein - rice blast fungus gy... 44 7e-04
gb|AAG37039.1|AF298204_1 (AF298204) polyprotein [Dictyostel... 39 0.001
ref|NP_054716.1| (NC_002201) Pol [equine foamy virus] >gi|7... 42 0.002
ref|NP_174966.1| (NM_103426) polyprotein, putative [Arabido... 42 0.002
gb|AAF24529.1|AC007534_10 (AC007534) F7F22.15 [Arabidopsis ... 42 0.002
gb|AAF21678.1|AF051915_2 (AF051915) pol polyprotein [Clados... 42 0.003
pir||S23570 pol polyprotein homolog - fungus (Cladosporium ... 42 0.003
pir||S70430 hypothetical protein 4 - fruit fly (Drosophila ... 39 0.006
dbj|BAB10790.1| (AB028613) retroelement pol polyprotein-lik... 40 0.006
gb|AAB38321.1| (U78765) FeSFV polymerase [feline syncytial ... 40 0.008
ref|NP_510849.1| (NM_078448) T23E7.1.p [Caenorhabditis eleg... 37 0.009
ref|NP_174919.1| (NM_103379) hypothetical protein [Arabidop... 40 0.011
dbj|BAA84632.1| (AP000492) ESTs C26347(C12145),AU078074(C12... 31 0.015
gb|AAD14015.2|S68526_1 (S68526) pol polyprotein [Drosophila... 39 0.018
ref|NP_056914.1| (NC_001871) pol gene [Feline foamy virus] ... 39 0.018
pir||S51599 Om(2D) protein - fruit fly (Drosophila ananassa... 39 0.018
dbj|BAB29761.1| (AK015243) data source:MGD, source key:MGI:... 39 0.024
gb|AAF63114.1|AC006423_15 (AC006423) Hypothetical protein [... 39 0.024
ref|NP_178672.1| (NM_126629) putative Ty3-gypsy-like retroe... 39 0.024
gb|AAM08527.1|AC068654_29 (AC068654) putative retroelement ... 30 0.026
gb|AAL90009.1| (AY089271) AT07338p [Drosophila melanogaster] 32 0.027
gb|AAF24531.1|AC007534_12 (AC007534) F7F22.17 [Arabidopsis ... 38 0.031
gb|AAK50597.1|AC084404_22 (AC084404) putative gag-pol precu... 31 0.034
gb|AAH15325.1|AAH15325 (BC015325) Unknown (protein for MGC:... 38 0.040
ref|XP_003947.1| (XM_003947) hypothetical protein FLJ20125 ... 38 0.040
ref|NP_044929.1| (NC_001831) pol polyprotein [bovine syncyt... 37 0.053
gb|AAK43513.1|AC020666_23 (AC020666) putative gag-pol precu... 32 0.054
pir||S18211 hypothetical protein 2 - fruit fly (Drosophila ... 30 0.055
ref|NP_178952.1| (NM_126908) putative retroelement pol poly... 37 0.069
gb|AAM01166.1|AC113336_18 (AC113336) Putative retroelement ... 31 0.073
gb|AAC47272.1| (U09586) integrase [Tribolium castaneum] 32 0.074
ref|NP_060146.1| (NM_017676) hypothetical protein FLJ20125 ... 36 0.12
ref|NP_055230.1| (NM_014415) zinc finger protein [Homo sapi... 35 0.20
gb|AAD14609.1| (AF096292) pol polyprotein [Drosophila immig... 27 0.31
dbj|BAB02630.1| (AP002054) retroelement pol polyprotein-lik... 35 0.34
gb|AAD39272.1|AC007203_4 (AC007203) Similar to retrotranspo... 34 0.44
gb|AAM00991.1|AC090482_20 (AC090482) Putative retroelement ... 27 0.51
gb|AAL90422.1| (AY089684) RH61266p [Drosophila melanogaster] 34 0.58
gb|AAF35887.1|AF226728_1 (AF226728) somatostatin receptor-i... 34 0.58
ref|NP_057232.1| (NM_016148) somatostatin receptor-interact... 34 0.58
gb|AAM08551.1|AC092749_4 (AC092749) Putative retroelement [... 34 0.58
gb|AAL16060.1|AF420242_1 (AF420242) RNA-directed DNA polyme... 34 0.58
gb|AAD04569.2| (AF102855) synaptic SAPAP-interacting protei... 33 0.76
ref|NP_113939.1| (NM_031751) Shank1; GKAP/SAPAP interacting... 33 0.76
gb|AAD42975.1|AF159046_1 (AF159046) SPANK-1 [Rattus norvegi... 33 0.76
ref|NP_567328.1| (NM_116834) may be a pseudogene [Arabidops... 33 0.76
ref|NP_063998.1| (NC_002511) orf764 [Beta vulgaris] >gi|904... 30 0.90
gb|AAF71195.1| (AF182201) pol protein integrase region [Pin... 33 0.99
gb|AAF71197.1| (AF182205) pol protein integrase region [Pin... 33 0.99
gb|AAL86511.1|AC099040_15 (AC099040) putative polyprotein [... 28 1.1
gb|AAF49126.1| (AE003516) CG8780 gene product [Drosophila m... 33 1.3
gb|AAL68285.1| (AY075473) RE33994p [Drosophila melanogaster] 33 1.3
gb|AAL68643.1|AF458767_1 (AF458767) polyprotein [Oryza sati... 32 1.7
gb|AAF71147.1| (AF152537) pol protein integrase region [Abi... 32 1.7
gb|AAL76005.1|AF466646_13 (AF466646) putative polyprotein [... 32 1.7
gb|AAC28081.1| (AF049084) integrase [Simian foamy virus] 32 1.7
gb|AAF71146.1| (AF152536) pol protein integrase region [Abi... 32 1.7
gb|AAC28083.1| (AF049086) integrase [Simian foamy virus] 32 2.2
emb|CAA58276.1| (X83297) integrase [Simian foamy virus] 32 2.2
ref|NP_044280.1| (NC_001736) pol polyprotein [Human foamy v... 32 2.9
gb|AAF71149.1| (AF152539) pol protein integrase region [Abi... 32 2.9
sp|P14350|POL_FOAMV POL polyprotein [Contains: Reverse tran... 32 2.9
dbj|BAB31197.1| (AK018404) data source:MGD, source key:MGI:... 32 2.9
ref|NP_004450.1| (NM_004459) fetal Alzheimer antigen [Homo ... 32 2.9
dbj|BAA89208.1| (AB032251) bromodomain PHD finger transcrip... 32 2.9
gb|AAA46122.1| (M54978) pol protein [Human spumaretrovirus] 32 2.9
emb|CAA58275.1| (X83296) integrase [Simian foamy virus] 32 2.9
>gb|AAK51585.1|AC022352_21 (AC022352) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1862
Score = 122 bits (305), Expect(2) = 2e-51
Identities = 54/83 (65%), Positives = 69/83 (83%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V +D E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 1396 KNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQEAHESPYSIHPGSTKMYLDLK 1455
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 1456 EKYWWVSMKREIAEFVALCDVCQ 1478
Score = 101 bits (251), Expect(2) = 2e-51
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 1479 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 1529
>gb|AAK51574.1|AC022352_10 (AC022352) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1810
Score = 120 bits (300), Expect(2) = 7e-51
Identities = 53/83 (63%), Positives = 69/83 (82%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V ++ E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 1344 KNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLK 1403
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 1404 EKYWWVSMKREIAEFVALCDVCQ 1426
Score = 101 bits (251), Expect(2) = 7e-51
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 1427 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 1477
>gb|AAK13118.1|AC080019_10 (AC080019) Polyprotein [Oryza sativa] [Oryza sativa (japonica
cultivar-group)]
Length = 1781
Score = 120 bits (300), Expect(2) = 7e-51
Identities = 53/83 (63%), Positives = 69/83 (82%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V ++ E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 1315 KNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLK 1374
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 1375 EKYWWVSMKREIAEFVALCDVCQ 1397
Score = 101 bits (251), Expect(2) = 7e-51
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 1398 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 1448
>gb|AAK52160.1|AC084831_14 (AC084831) putative polyprotein [Oryza sativa]
Length = 1475
Score = 120 bits (301), Expect(2) = 7e-51
Identities = 53/83 (63%), Positives = 69/83 (82%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV + +D E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 1009 KNMKQGKAAGFTEDEHGTLWNGNRVCLLDDRELKQLILQEAHESPYSIHPGSTKMYLDLK 1068
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 1069 EKYWWVSMKREIAEFVALCDVCQ 1091
Score = 100 bits (250), Expect(2) = 7e-51
Identities = 42/51 (82%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWV+VDRL
Sbjct: 1092 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVIVDRL 1142
>gb|AAM14674.1|AC097446_3 (AC097446) Putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1433
Score = 120 bits (300), Expect(2) = 7e-51
Identities = 53/83 (63%), Positives = 69/83 (82%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V ++ E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 967 KNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLK 1026
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 1027 EKYWWVSMKREIAEFVALCDVCQ 1049
Score = 101 bits (251), Expect(2) = 7e-51
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 1050 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 1100
>gb|AAL77166.1|AC091732_17 (AC091732) Putative polyprotein [Oryza sativa]
Length = 816
Score = 120 bits (300), Expect(2) = 7e-51
Identities = 53/83 (63%), Positives = 69/83 (82%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V ++ E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 350 KNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLK 409
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 410 EKYWWVSMKREIAEFVALCDVCQ 432
Score = 101 bits (251), Expect(2) = 7e-51
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 433 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 483
>dbj|BAB61226.1| (AP003257) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1506
Score = 119 bits (299), Expect(2) = 9e-51
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW RV V ++ E+++LILQEAH+SPYSIHPG+TKMYLDL+
Sbjct: 1040 KNMKQGKAAGFTEDEHGTLWNGKRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLR 1099
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAEYVA+CDVCQ
Sbjct: 1100 EKYWWVSMKREIAEYVALCDVCQ 1122
Score = 101 bits (251), Expect(2) = 9e-51
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 1123 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 1173
>gb|AAM01156.1|AC113336_8 (AC113336) Putative retroelement [Oryza sativa (japonica
cultivar-group)]
Length = 1784
Score = 119 bits (299), Expect(2) = 1e-50
Identities = 54/83 (65%), Positives = 67/83 (80%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V D E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 1318 KNMKQGKAAGFTEDEHGTLWNGNRVCVPADKELKQLILQEAHESPYSIHPGSTKMYLDLK 1377
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ W MK++IAE+VA+CDVCQ
Sbjct: 1378 GKYWWVSMKREIAEFVALCDVCQ 1400
Score = 100 bits (250), Expect(2) = 1e-50
Identities = 42/51 (82%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWV+VDRL
Sbjct: 1401 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVIVDRL 1451
>gb|AAM08845.1|AC113337_9 (AC113337) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1728
Score = 119 bits (297), Expect(2) = 1e-50
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V ++ E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 1339 KNMKQGKATGFTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLK 1398
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ W MK++IAE+VA+CDVCQ
Sbjct: 1399 KKYWWVSMKREIAEFVALCDVCQ 1421
Score = 101 bits (251), Expect(2) = 1e-50
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 1422 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 1472
>gb|AAK51582.1|AC022352_18 (AC022352) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 2447
Score = 118 bits (296), Expect(2) = 2e-50
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V + E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 1981 KNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLK 2040
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 2041 EKYWWVSMKREIAEFVALCDVCQ 2063
Score = 101 bits (251), Expect(2) = 2e-50
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 2064 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 2114
Score = 58.5 bits (140), Expect(2) = 1e-14
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = -2
Query: 155 PAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDR 30
P GL PLP+P W+ + MDF+ GLPRT+ G DSI+VVVDR
Sbjct: 1250 PHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDR 1291
Score = 41.2 bits (95), Expect(2) = 1e-14
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = -1
Query: 336 AEIRKLILQEAHDSPYSIHPGNTKMYLDLKDSF*WTGMKKDIAEYVAVCDVCQ 178
+ +R L+LQEAH H G K + L F W M++D+ +VA C CQ
Sbjct: 1190 SSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQ 1242
>gb|AAK51580.1|AC022352_16 (AC022352) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1023
Score = 118 bits (296), Expect(2) = 2e-50
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V + E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 557 KNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLK 616
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 617 EKYWWVSMKREIAEFVALCDVCQ 639
Score = 101 bits (251), Expect(2) = 2e-50
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 640 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 690
>gb|AAM01052.1|AC091735_25 (AC091735) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 874
Score = 118 bits (296), Expect(2) = 2e-50
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V + E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 453 KNMKQGKAAGFTEDEHGTLWNGNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLK 512
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 513 EKYWWVSMKREIAEFVALCDVCQ 535
Score = 101 bits (251), Expect(2) = 2e-50
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 536 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 586
>gb|AAM22721.1|AC092388_5 (AC092388) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1784
Score = 117 bits (294), Expect(2) = 3e-50
Identities = 52/83 (62%), Positives = 68/83 (81%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW +RV V ++ E+++LILQEAH+SPYSIHPG+TKMYLDL
Sbjct: 1322 KNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLM 1381
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 1382 EKYWWVSMKREIAEFVALCDVCQ 1404
Score = 101 bits (251), Expect(2) = 3e-50
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 1405 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 1455
>dbj|BAB61255.1| (AP003315) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1500
Score = 117 bits (293), Expect(2) = 6e-50
Identities = 52/83 (62%), Positives = 67/83 (80%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA GF EDEH TLW RV V + E+++LIL+EAH+SPYSIHPG+TKMYLDLK
Sbjct: 1034 KNMKQGKAAGFTEDEHGTLWNGKRVCVPDSRELKQLILREAHESPYSIHPGSTKMYLDLK 1093
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 1094 EKYWWVSMKREIAEFVALCDVCQ 1116
Score = 100 bits (250), Expect(2) = 6e-50
Identities = 42/51 (82%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWV+VDRL
Sbjct: 1117 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVIVDRL 1167
>gb|AAL77157.1|AC091732_8 (AC091732) Putative polyprotein [Oryza sativa]
Length = 1839
Score = 117 bits (294), Expect(2) = 5e-49
Identities = 52/83 (62%), Positives = 68/83 (81%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+ M +GKA F EDEH TLW +RV V ++ E+++LILQEAH+SPYSIHPG+TKMYLDLK
Sbjct: 1373 KNMKQGKAASFTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLK 1432
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
+ + W MK++IAE+VA+CDVCQ
Sbjct: 1433 EKYWWVSMKREIAEFVALCDVCQ 1455
Score = 97.4 bits (241), Expect(2) = 5e-49
Identities = 41/50 (82%), Positives = 48/50 (96%)
Frame = -2
Query: 176 VKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
VKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ G+DSIWVVVDRL
Sbjct: 1457 VKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGHDSIWVVVDRL 1506
>gb|AAL86497.1|AC099040_1 (AC099040) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1722
Score = 113 bits (282), Expect(2) = 1e-48
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDEH T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 1255 KKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 1314
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 1315 KERFWWASMKREIAEYVAVCDVCQ 1338
Score = 100 bits (250), Expect(2) = 1e-48
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1339 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1389
>gb|AAM14679.1|AC097446_8 (AC097446) Putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1022
Score = 110 bits (276), Expect(2) = 5e-48
Identities = 50/84 (59%), Positives = 65/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V N+ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 555 KKNMRRGKAIGFLEDEQGTVWLGERICVPNNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 614
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 615 KERFWWACMKREIAEYVAVCDVCQ 638
Score = 100 bits (250), Expect(2) = 5e-48
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 639 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 689
>dbj|BAB63638.1| (AP003263) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1521
Score = 110 bits (276), Expect(2) = 8e-48
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH +PYSIHPG+TKMY DL
Sbjct: 1054 KKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQTPYSIHPGSTKMYQDL 1113
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+C+VCQ
Sbjct: 1114 KEKFWWVSMRREIAEFVALCNVCQ 1137
Score = 100 bits (248), Expect(2) = 8e-48
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1138 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1188
>gb|AAK52162.1|AC084831_16 (AC084831) putative polyprotein [Oryza sativa]
Length = 1461
Score = 112 bits (280), Expect(2) = 8e-48
Identities = 49/84 (58%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ MS GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 994 KKNMSVGKARDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1053
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1054 KEKFWWVSMRREIAEFVALCDVCQ 1077
Score = 98.6 bits (244), Expect(2) = 8e-48
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG++SIWVVVDRL
Sbjct: 1078 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHESIWVVVDRL 1128
>gb|AAL83344.1|AC074282_11 (AC074282) Putative polyprotein [Oryza sativa (japonica
cultivar-group)]
gb|AAM08733.1|AC116601_26 (AC116601) Putative polyprotein [Oryza sativa]
Length = 1443
Score = 110 bits (274), Expect(2) = 8e-48
Identities = 49/84 (58%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 976 KKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 1035
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 1036 KERFWWASMKREIAEYVAVCDVCQ 1059
Score = 100 bits (250), Expect(2) = 8e-48
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1060 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1110
>gb|AAK13123.1|AC080019_15 (AC080019) Similar to Transposon MAGGYgagandpolgenehomologues [Oryza
sativa] [Oryza sativa (japonica cultivar-group)]
Length = 2157
Score = 109 bits (273), Expect(2) = 1e-47
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 1390 KKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 1449
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCD+CQ
Sbjct: 1450 KERFWWASMKREIAEYVAVCDICQ 1473
Score = 101 bits (251), Expect = 3e-21
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 2034 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQDGYDSIWVVVDRL 2084
Score = 100 bits (250), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1474 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1524
>gb|AAM08795.1|AC090486_5 (AC090486) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1785
Score = 110 bits (275), Expect(2) = 1e-47
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1318 KKNMRVGKARDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1377
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1378 KEKFWWVSMRREIAEFVALCDVCQ 1401
Score = 100 bits (248), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1402 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1452
>gb|AAK92588.1|AC074354_22 (AC074354) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
gb|AAM01103.1|AC098682_7 (AC098682) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1777
Score = 110 bits (275), Expect(2) = 1e-47
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1310 KKNMRVGKARDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1369
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1370 KEKFWWVSMRREIAEFVALCDVCQ 1393
Score = 100 bits (248), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1394 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1444
>gb|AAM14695.1|AC097446_24 (AC097446) Putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1680
Score = 113 bits (282), Expect(2) = 1e-47
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDEH T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 1213 KKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 1272
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 1273 KERFWWASMKREIAEYVAVCDVCQ 1296
Score = 97.4 bits (241), Expect(2) = 1e-47
Identities = 42/51 (82%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLP+T G+DSIWV+VDRL
Sbjct: 1297 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPKTSLGHDSIWVIVDRL 1347
>gb|AAK92604.1|AC078944_15 (AC078944) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1571
Score = 109 bits (273), Expect(2) = 1e-47
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ +GKA GF EDEH T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 1258 KKNRRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 1317
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAEYVAVCDVCQ
Sbjct: 1318 KERFWWASMRREIAEYVAVCDVCQ 1341
Score = 100 bits (250), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1342 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1392
>dbj|BAB86165.1| (AP003537) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1521
Score = 110 bits (275), Expect(2) = 1e-47
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1054 KKNMRVGKARDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1113
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1114 KEKFWWVSMRREIAEFVALCDVCQ 1137
Score = 100 bits (248), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1138 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1188
>gb|AAM01019.1|AC090488_19 (AC090488) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1475
Score = 110 bits (275), Expect(2) = 1e-47
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1031 KKNMRVGKARDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1090
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1091 KEKFWWVSMRREIAEFVALCDVCQ 1114
Score = 100 bits (248), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1115 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1165
>gb|AAL78097.1|AC093568_7 (AC093568) Putative polyprotein [Oryza sativa]
Length = 1473
Score = 109 bits (273), Expect(2) = 1e-47
Identities = 49/84 (58%), Positives = 64/84 (75%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ +GKA GF EDEH T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 1006 KKNRRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 1065
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K F W MK++IAEYVAVCDVCQ
Sbjct: 1066 KKRFWWASMKREIAEYVAVCDVCQ 1089
Score = 100 bits (250), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1090 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1140
>gb|AAM00956.1|AC021892_20 (AC021892) Putative polyprotein [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1167
Score = 109 bits (273), Expect(2) = 1e-47
Identities = 49/84 (58%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 700 KKNMRRGKAIGFLEDEQGTVWLGERICVLDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 759
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 760 KERFWWASMKREIAEYVAVCDVCQ 783
Score = 100 bits (250), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 784 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 834
>gb|AAK92543.1|AC051624_1 (AC051624) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1773
Score = 110 bits (274), Expect(2) = 1e-47
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1310 KKNMRVGKAREFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1369
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1370 KEKFWWVSMRREIAEFVALCDVCQ 1393
Score = 100 bits (248), Expect(2) = 1e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1394 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1444
>gb|AAK92560.1|AC051624_18 (AC051624) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1714
Score = 112 bits (280), Expect(2) = 1e-47
Identities = 49/84 (58%), Positives = 64/84 (75%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V ND E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1247 KKNMRVGKARDFHEDEHGTIWMGERLCVPNDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1306
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1307 KEKFWWVSMRREIAEFVALCDVCQ 1330
Score = 97.8 bits (242), Expect(2) = 1e-47
Identities = 43/51 (84%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT G+DSIWVVVDRL
Sbjct: 1331 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSLGHDSIWVVVDRL 1381
>gb|AAL78107.1|AC093568_17 (AC093568) Putative polyprotein [Oryza sativa]
Length = 1819
Score = 109 bits (273), Expect(2) = 2e-47
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1352 KKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1411
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1412 KEKFWWVSMRREIAEFVALCDVCQ 1435
Score = 100 bits (248), Expect(2) = 2e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1436 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1486
>gb|AAL77161.1|AC091732_12 (AC091732) Putative polyprotein [Oryza sativa]
Length = 1731
Score = 109 bits (273), Expect(2) = 2e-47
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1264 KKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1323
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1324 KEKFWWVSMRREIAEFVALCDVCQ 1347
Score = 100 bits (248), Expect(2) = 2e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1348 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1398
>gb|AAD27547.1|AF111709_1 (AF111709) polyprotein [Oryza sativa subsp. indica] [Oryza sativa
(indica cultivar-group)]
Length = 1521
Score = 109 bits (273), Expect(2) = 2e-47
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1054 KKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1113
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1114 KEKFWWVSMRREIAEFVALCDVCQ 1137
Score = 100 bits (248), Expect(2) = 2e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1138 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1188
>dbj|BAA90795.1| (AP001168) Similar to 22 kDa kafirin cluster; Ty3-Gypsy type
(AF061282) [Oryza sativa (japonica cultivar-group)]
Length = 963
Score = 108 bits (271), Expect(2) = 2e-47
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 496 KKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 555
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
++ F W MK++IAEYVAVCDVCQ
Sbjct: 556 RERFWWASMKREIAEYVAVCDVCQ 579
Score = 100 bits (250), Expect(2) = 2e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 580 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 630
>gb|AAK92599.1|AC078944_10 (AC078944) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1445
Score = 110 bits (274), Expect(2) = 2e-47
Identities = 51/92 (55%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDEH T+W +R+ V ++ +++ IL+EAHD+ YSIHP +TKMY DL
Sbjct: 982 KKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPSSTKMYQDL 1041
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQS-KGRASK 157
K+ F W M+++IAEYVAVCDVCQ KG K
Sbjct: 1042 KERFWWASMRREIAEYVAVCDVCQRVKGEHQK 1073
Score = 99.4 bits (246), Expect(2) = 2e-47
Identities = 43/51 (84%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVK EHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1066 RVKGEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1116
>gb|AAL31081.1|AC091749_10 (AC091749) putative polyprotein [Oryza sativa]
Length = 1416
Score = 108 bits (269), Expect(2) = 3e-47
Identities = 49/84 (58%), Positives = 64/84 (75%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 949 KKNMRRGKAIGFLEDEQGTVWLGERSCVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 1008
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 1009 KERFWWASMKREIAEYVAVCDVCQ 1032
Score = 100 bits (250), Expect(2) = 3e-47
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1033 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1083
>gb|AAM08802.1|AC090486_12 (AC090486) putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1594
Score = 108 bits (270), Expect(2) = 7e-47
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ + +GKA GF EDE T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TKMY DL
Sbjct: 1268 KKNIRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDL 1327
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 1328 KERFWWASMKREIAEYVAVCDVCQ 1351
Score = 99.4 bits (246), Expect(2) = 7e-47
Identities = 43/51 (84%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKP GLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1352 RVKAEHQKPVGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1402
>gb|AAK13121.1|AC080019_13 (AC080019) Similar to Sorghum bicolor 22 kDakafirincluster [Oryza
sativa] [Oryza sativa (japonica cultivar-group)]
Length = 733
Score = 105 bits (263), Expect(2) = 1e-46
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRK--------LILQEAHDSPYSIHPGN 271
+ M +GKA GF EDEH TLW +R+ +RK LILQEAH+SPYSIHPG+
Sbjct: 286 KNMKQGKAAGFTEDEHGTLWNGNRI----TENLRKMYLDISGMLILQEAHESPYSIHPGS 341
Query: 270 TKMYLDLKDSF*WTGMKKDIAEYVAVCDVCQ 178
TKMYLDLK+ + W MK++IAE+VA+CDVCQ
Sbjct: 342 TKMYLDLKEKYWWVSMKREIAEFVALCDVCQ 372
Score = 101 bits (251), Expect(2) = 1e-46
Identities = 43/51 (84%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKWD++GMDFITGLP+T+ GYDSIWVVVDRL
Sbjct: 373 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRL 423
>dbj|BAB90703.1| (AP004232) putative Sorghum bicolor 22 kDa kafirin cluster
polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1524
Score = 106 bits (265), Expect(2) = 2e-46
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF EDE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1057 KKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 1116
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1117 KEKFWWVSMRREIAEFVALCDVCQ 1140
Score = 100 bits (248), Expect(2) = 2e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1141 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1191
>dbj|BAA95869.1| (AP002071) Similar to Sorghum bicolor 22 kDa kafirin cluster;
polyprotein. (AF061282) [Oryza sativa (japonica
cultivar-group)]
Length = 1524
Score = 106 bits (265), Expect(2) = 2e-46
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF EDE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1057 KKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 1116
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1117 KEKFWWVSMRREIAEFVALCDVCQ 1140
Score = 100 bits (248), Expect(2) = 2e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1141 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1191
>gb|AAL31078.1|AC091749_7 (AC091749) putative polyprotein [Oryza sativa]
Length = 1524
Score = 106 bits (265), Expect(2) = 2e-46
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF EDE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1057 KKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 1116
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1117 KEKFWWVSMRREIAEFVALCDVCQ 1140
Score = 100 bits (248), Expect(2) = 2e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1141 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1191
>dbj|BAB62635.1| (AP003610) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
dbj|BAB64248.1| (AP003727) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1524
Score = 106 bits (265), Expect(2) = 2e-46
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF EDE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1057 KKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 1116
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1117 KEKFWWVSMRREIAEFVALCDVCQ 1140
Score = 100 bits (248), Expect(2) = 2e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1141 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1191
>gb|AAL86492.1|AC077693_31 (AC077693) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1524
Score = 106 bits (265), Expect(2) = 2e-46
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF EDE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1057 KKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 1116
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1117 KEKFWWVSMRREIAEFVALCDVCQ 1140
Score = 100 bits (248), Expect(2) = 2e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1141 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1191
>dbj|BAB84467.1| (AP003546) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1455
Score = 108 bits (270), Expect(2) = 2e-46
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V ++ +++ IL+EAHD+ YSIHPG+TK+Y DL
Sbjct: 1006 KKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKIYQDL 1065
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 1066 KERFWWASMKREIAEYVAVCDVCQ 1089
Score = 98.2 bits (243), Expect(2) = 2e-46
Identities = 43/51 (84%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IP WKW+++GMDFITGLPRT SG+DSIWV+VDRL
Sbjct: 1090 RVKAEHQKPAGLLQPLKIPGWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1140
>gb|AAL83634.1|AC093017_18 (AC093017) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1229
Score = 106 bits (265), Expect(2) = 2e-46
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF EDE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 762 KKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 821
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 822 KEKFWWVSMRREIAEFVALCDVCQ 845
Score = 100 bits (248), Expect(2) = 2e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 846 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 896
>gb|AAM14684.1|AC097446_13 (AC097446) Putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1569
Score = 108 bits (271), Expect(2) = 2e-46
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
KER+ G AK F DE + LW++ R+YV +R LIL+EAH S YS+HPG+TKMY DL
Sbjct: 1111 KERLVAGFAKEFSTDEKDVLWYKKRIYVPEQGGLRGLILKEAHKSAYSLHPGSTKMYQDL 1170
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ + W MK+D+AEYVA+CDVCQ
Sbjct: 1171 KEGYWWPNMKRDVAEYVALCDVCQ 1194
Score = 97.4 bits (241), Expect(2) = 2e-46
Identities = 41/51 (80%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
+VKAEHQ+PAGLLQPL IPEWKWD++GMDFI GLP+T +GYDSIWV+VDRL
Sbjct: 1195 KVKAEHQRPAGLLQPLRIPEWKWDEIGMDFIVGLPKTATGYDSIWVIVDRL 1245
>gb|AAM00970.1|AC021892_34 (AC021892) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1425
Score = 108 bits (271), Expect(2) = 3e-46
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1015 KKNMRVGKARDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1074
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+V +CDVCQ
Sbjct: 1075 KEKFWWVSMRREIAEFVVLCDVCQ 1098
Score = 97.1 bits (240), Expect(2) = 3e-46
Identities = 43/51 (84%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL I EWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1099 RVKAEHQRPAGLLQPLQIQEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1149
>gb|AAD38284.1|AC007789_10 (AC007789) putative polyprotein [Oryza sativa]
dbj|BAB18315.1| (AP002865) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
dbj|BAB40075.1| (AP003074) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1220
Score = 110 bits (275), Expect(2) = 3e-46
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1054 KKNMRVGKARDFLEDEHRTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDL 1113
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1114 KEKFWWVSMRREIAEFVALCDVCQ 1137
Score = 95.5 bits (236), Expect(2) = 3e-46
Identities = 41/51 (80%), Positives = 47/51 (91%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+P GL QPL IP+WKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1138 RVKAEHQRPVGLFQPLQIPKWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1188
>gb|AAM01169.1|AC113336_21 (AC113336) Putative retroelement [Oryza sativa (japonica
cultivar-group)]
Length = 1449
Score = 105 bits (262), Expect(2) = 3e-46
Identities = 46/84 (54%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V + E++ I++EAH++ YSIHPG+TKMY DL
Sbjct: 982 KKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDL 1041
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K F W M+++IAEYVA+CDVCQ
Sbjct: 1042 KQQFWWASMRREIAEYVALCDVCQ 1065
Score = 100 bits (248), Expect(2) = 3e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT +G+DSIWVVVDRL
Sbjct: 1066 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1116
>dbj|BAB68106.1| (AP003734) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1014
Score = 104 bits (259), Expect(2) = 3e-46
Identities = 45/51 (88%), Positives = 50/51 (97%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPLPIPEWKW+++GMDFITGLPRT SGYDSIWV+VDRL
Sbjct: 642 RVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRL 692
Score = 101 bits (251), Expect(2) = 3e-46
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
ER+ + K F D+ T+W+ R+ V E+R LIL+EAH+S YSIHPG+TKMY D+K
Sbjct: 559 ERIQEKKDTNFSIDDQGTVWYGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIK 618
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
F W GMK+D+AEYVA+CD+CQ
Sbjct: 619 AYFWWAGMKRDVAEYVALCDICQ 641
>dbj|BAB85443.1| (AP004031) similar to polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1524
Score = 105 bits (261), Expect(2) = 5e-46
Identities = 46/84 (54%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF +DE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1057 KKNMRVGKARGFVKDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 1116
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1117 KEKFWWVSMRREIAEFVALCDVCQ 1140
Score = 100 bits (248), Expect(2) = 5e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1141 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1191
>gb|AAM14693.1|AC097446_22 (AC097446) Putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1630
Score = 104 bits (259), Expect(2) = 8e-46
Identities = 46/84 (54%), Positives = 62/84 (73%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V + E++ I++EAH++ YSIHPG+TKMY DL
Sbjct: 1179 KKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDL 1238
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K F W M+ +IAEYVA+CDVCQ
Sbjct: 1239 KQQFWWASMRHEIAEYVALCDVCQ 1262
Score = 100 bits (248), Expect(2) = 8e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT +G+DSIWVVVDRL
Sbjct: 1263 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1313
>gb|AAM01160.1|AC113336_12 (AC113336) Putative retroelement [Oryza sativa (japonica
cultivar-group)]
Length = 1466
Score = 104 bits (259), Expect(2) = 8e-46
Identities = 46/84 (54%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V + E++ I++EAH++ YSIHPG+TKMY DL
Sbjct: 1014 KKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKNTIMKEAHETLYSIHPGSTKMYQDL 1073
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K F W M+++IAEYVA+CDVCQ
Sbjct: 1074 KLQFWWASMRREIAEYVALCDVCQ 1097
Score = 100 bits (248), Expect(2) = 8e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT +G+DSIWVVVDRL
Sbjct: 1098 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1148
>gb|AAM01163.1|AC113336_15 (AC113336) Putative retroelement [Oryza sativa (japonica
cultivar-group)]
Length = 1461
Score = 104 bits (259), Expect(2) = 8e-46
Identities = 46/84 (54%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V + E++ I++EAH++ YSIHPG+TKMY DL
Sbjct: 994 KKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKNTIMKEAHETLYSIHPGSTKMYQDL 1053
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K F W M+++IAEYVA+CDVCQ
Sbjct: 1054 KLQFWWASMRREIAEYVALCDVCQ 1077
Score = 100 bits (248), Expect(2) = 8e-46
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT +G+DSIWVVVDRL
Sbjct: 1078 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1128
>gb|AAM01060.1|AC091735_33 (AC091735) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 986
Score = 108 bits (269), Expect(2) = 8e-46
Identities = 47/84 (55%), Positives = 64/84 (75%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
KER++ G AK F DE + LW++ R+YV + +R LIL+EAH+S YS+HPG+TKMY DL
Sbjct: 528 KERLAAGFAKEFSTDEKDVLWYKKRMYVPEQSGLRGLILKEAHESAYSLHPGSTKMYQDL 587
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ + W MK+D+AEYVA+C VCQ
Sbjct: 588 KEGYWWPNMKRDVAEYVALCGVCQ 611
Score = 96.3 bits (238), Expect(2) = 8e-46
Identities = 40/51 (78%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
+VKAEHQ+PAGLLQPL IPEWKWD++GMDFI GLP+T +GYDSIWV++DRL
Sbjct: 612 KVKAEHQRPAGLLQPLRIPEWKWDEIGMDFIVGLPKTATGYDSIWVIMDRL 662
>gb|AAL59229.1|AF448416_9 (AF448416) gag-pol [Zea mays]
Length = 1470
Score = 105 bits (262), Expect(2) = 2e-45
Identities = 47/84 (55%), Positives = 62/84 (72%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K + GKA F EDE T+WF+ R+ V +R+LIL+EAHDS YSIHPG+TKMY DL
Sbjct: 1011 KALIGLGKAPDFTEDEQGTIWFKKRICVPEIEHLRQLILREAHDSAYSIHPGSTKMYQDL 1070
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ + W G+K+D+A +VA+CDVCQ
Sbjct: 1071 KEKYWWYGLKRDVATHVALCDVCQ 1094
Score = 97.8 bits (242), Expect(2) = 2e-45
Identities = 41/51 (80%), Positives = 47/51 (91%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL +PEWKW+++ MDFI GLPRTR GYDSIWV+VDRL
Sbjct: 1095 RVKAEHQRPAGLLQPLKVPEWKWEEISMDFIVGLPRTRDGYDSIWVIVDRL 1145
>gb|AAK92676.1|AC090714_9 (AC090714) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 761
Score = 106 bits (265), Expect(2) = 3e-45
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+ F EDEH T+W +R+ V +D E++ LIL EAH + YSI PG+TKMY DL
Sbjct: 294 KKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIRPGSTKMYQDL 353
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 354 KEKFWWVSMRREIAEFVALCDVCQ 377
Score = 95.9 bits (237), Expect(2) = 3e-45
Identities = 41/51 (80%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVK EHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVV+D+L
Sbjct: 378 RVKTEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVMDQL 428
>dbj|BAB64173.1| (AP003254) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
dbj|BAB91875.1| (AP003378) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1524
Score = 102 bits (253), Expect(2) = 4e-45
Identities = 46/84 (54%), Positives = 62/84 (73%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF EDE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1057 KKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 1116
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDV Q
Sbjct: 1117 KEKFWWVSMRREIAEFVALCDVRQ 1140
Score = 100 bits (248), Expect(2) = 4e-45
Identities = 44/51 (86%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1141 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1191
>gb|AAK13085.1|AC078839_1 (AC078839) Similar to Sorghum bicolor 22 kDakafirinclusterpolyprotein
[Oryza sativa]
Length = 1484
Score = 105 bits (263), Expect(2) = 4e-45
Identities = 47/84 (55%), Positives = 63/84 (74%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M GKA+GF EDE T+W +R+ V + E++ LIL EAH + YSIHPG+TKMY DL
Sbjct: 1017 KKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDL 1076
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W M+++IAE+VA+CDVCQ
Sbjct: 1077 KEKFWWVRMRREIAEFVALCDVCQ 1100
Score = 96.3 bits (238), Expect(2) = 4e-45
Identities = 43/51 (84%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQ L IPEWKW+++GMDFITGLPRT SG+DSIWVVVDRL
Sbjct: 1101 RVKAEHQRPAGLLQLLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1151
>dbj|BAB63637.1| (AP003263) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1572
Score = 104 bits (259), Expect(2) = 5e-45
Identities = 45/51 (88%), Positives = 50/51 (97%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPLPIPEWKW+++GMDFITGLPRT SGYDSIWV+VDRL
Sbjct: 1200 RVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRL 1250
Score = 97.4 bits (241), Expect(2) = 5e-45
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+R+ + K F D+ T+W R+ V E+R LIL+EAH+S YSIHPG+TKMY D+K
Sbjct: 1117 KRIQEKKDTNFSIDDKGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIK 1176
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
F W GMK+D+AEYVA+CD+CQ
Sbjct: 1177 AYFWWAGMKRDVAEYVALCDICQ 1199
>gb|AAM12303.1|AC091680_4 (AC091680) putative polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1658
Score = 104 bits (259), Expect(2) = 1e-44
Identities = 45/51 (88%), Positives = 50/51 (97%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPLPIPEWKW+++GMDFITGLPRT SGYDSIWV+VDRL
Sbjct: 1439 RVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRL 1489
Score = 96.3 bits (238), Expect(2) = 1e-44
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = -1
Query: 426 ERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLK 247
+R+ K K F D+ T+W R+ V E+R LIL+EAH+S YSI+PG+TKMY D+K
Sbjct: 1356 KRIQKMKDTDFSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIYPGSTKMYQDIK 1415
Query: 246 DSF*WTGMKKDIAEYVAVCDVCQ 178
F W GMK+D+AEYVA+CD+CQ
Sbjct: 1416 AYFWWVGMKRDVAEYVALCDICQ 1438
>gb|AAD22153.1|AF061282_6 (AF061282) polyprotein [Sorghum bicolor]
Length = 1484
Score = 103 bits (256), Expect(2) = 1e-44
Identities = 46/78 (58%), Positives = 58/78 (73%)
Frame = -1
Query: 411 GKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLKDSF*W 232
GKA GFR D++ LWF R+ V IR IL+EAH+S YSIHPG+TKMYLDL+ + W
Sbjct: 1034 GKAPGFRIDDNGVLWFGKRICVPEVKAIRDTILREAHESAYSIHPGSTKMYLDLRQKYWW 1093
Query: 231 TGMKKDIAEYVAVCDVCQ 178
G+K+D+AEYVA+CD CQ
Sbjct: 1094 YGLKRDVAEYVALCDTCQ 1111
Score = 97.4 bits (241), Expect(2) = 1e-44
Identities = 41/51 (80%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQP+ IPEWKW+++GMDFI GLPRT+ GYDSIWV+VDRL
Sbjct: 1112 RVKAEHQRPAGLLQPMKIPEWKWEEVGMDFIVGLPRTQRGYDSIWVIVDRL 1162
>gb|AAL75746.1|AC091724_19 (AC091724) Putative polyprotein [Oryza sativa]
Length = 1322
Score = 104 bits (259), Expect(2) = 1e-44
Identities = 45/51 (88%), Positives = 50/51 (97%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEHQ+PAGLLQPLPIPEWKW+++GMDFITGLPRT SGYDSIWV+VDRL
Sbjct: 950 RVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRL 1000
Score = 95.9 bits (237), Expect(2) = 1e-44
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = -1
Query: 414 KGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDLKDSF* 235
+ K F D+ T+W R+ V E+R LIL+EAH+S YSIHPG+TKMY D+K F
Sbjct: 871 ENKGTDFSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFW 930
Query: 234 WTGMKKDIAEYVAVCDVCQ 178
W GMK+D+AEY+A+CD+CQ
Sbjct: 931 WAGMKRDVAEYIALCDICQ 949
>gb|AAL31683.1|AC092390_4 (AC092390) putative polyprotein [Oryza sativa]
Length = 962
Score = 101 bits (251), Expect(2) = 2e-44
Identities = 47/84 (55%), Positives = 58/84 (68%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
KE GKA ED LW+ +R+ V +RK+IL+EAHDSPYS+HPG+TKMY DL
Sbjct: 733 KEWKVHGKAADITEDLEGILWYGNRIIVPQSGNLRKIILKEAHDSPYSLHPGSTKMYHDL 792
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
KD + W MK+ IAEYVA+C VCQ
Sbjct: 793 KDLYWWPNMKQHIAEYVALCHVCQ 816
Score = 98.2 bits (243), Expect(2) = 2e-44
Identities = 41/51 (80%), Positives = 48/51 (93%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
+VKAEHQKP GLLQPL IPEWKWD++GMDFITGLP+T +GYDSIWV++DRL
Sbjct: 817 QVKAEHQKPIGLLQPLQIPEWKWDEIGMDFITGLPKTSTGYDSIWVIIDRL 867
>gb|AAM01007.1|AC090488_7 (AC090488) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1496
Score = 107 bits (268), Expect(2) = 4e-44
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA GF EDE T+W +R+ V ++ +++ IL+EAHD+ YSIHP +TKMY DL
Sbjct: 1160 KKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPSSTKMYQDL 1219
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K+ F W MK++IAEYVAVCDVCQ
Sbjct: 1220 KERFWWASMKREIAEYVAVCDVCQ 1243
Score = 90.9 bits (224), Expect(2) = 4e-44
Identities = 39/45 (86%), Positives = 43/45 (94%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIW 45
RVKAEHQKPAGLLQPL IPEWKW+++GMDFITGLPRT SG+DSIW
Sbjct: 1244 RVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIW 1288
>gb|AAM01095.1|AC092748_33 (AC092748) Putative retroelement [Oryza sativa] [Oryza sativa
(japonica cultivar-group)]
Length = 1240
Score = 100 bits (249), Expect(2) = 9e-44
Identities = 43/84 (51%), Positives = 62/84 (73%)
Frame = -1
Query: 429 KERMSKGKAKGFREDEHETLWFEDRVYVSNDAEIRKLILQEAHDSPYSIHPGNTKMYLDL 250
K+ M +GKA G+ EDE +W +R+ + ++ E+ I++EAH++ YSIHPG+TKMY DL
Sbjct: 780 KKNMRRGKAIGYIEDEQGIVWLGERICLPDNKELNDTIMKEAHETLYSIHPGSTKMYQDL 839
Query: 249 KDSF*WTGMKKDIAEYVAVCDVCQ 178
K F W M+++IAEYVA+CDVCQ
Sbjct: 840 KQQFWWASMRREIAEYVALCDVCQ 863
Score = 97.1 bits (240), Expect(2) = 9e-44
Identities = 42/51 (82%), Positives = 49/51 (95%)
Frame = -2
Query: 179 RVKAEHQKPAGLLQPLPIPEWKWDKLGMDFITGLPRTRSGYDSIWVVVDRL 27
RVKAEH+KPAGLLQPL IP+WKW+++GMDFITGLPRT +G+DSIWVVVDRL
Sbjct: 864 RVKAEHRKPAGLLQPLKIPKWKWEEIGMDFITG