The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTN 2.2.3 [Apr-24-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Fgr-S3_1_D04_T7.seq Fgr-S3_1_D04_T7 LENGTH:157bp ;
DIRECTION:5 ; CLONE:Fgr-S3_1_D04 ; CLONELIB: n/a
(157 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
1,217,082 sequences; 1,205,879,881 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete... 172 6e-41
emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 141 2e-31
emb|X15901.1|CHOSXX Oryza sativa complete chloroplast genome 141 2e-31
dbj|AP003280.2| Oryza sativa (japonica cultivar-group) geno... 141 2e-31
gb|M11203.1|MZECPPSI Maize chloroplast photosystem I ps1A1 ... 141 2e-31
gb|AC074232.11| Oryza sativa (japonica cultivar-group) chro... 133 6e-29
gb|AC092750.2| Oryza sativa (japonica cultivar-group) culti... 133 6e-29
gb|AF223226.1|AF223226 Ginkgo biloba photosystem protein (p... 127 3e-27
gb|AF180025.1|AF180025 Torreya californica 127 3e-27
gb|AF180020.1|AF180020 Angiopteris evecta 127 3e-27
gb|AF180015.1|AF180015 Cycas revoluta 127 3e-27
gb|AF180011.1|AF180011 Encephalartos lebomboensis 127 3e-27
dbj|AP000423.1|AP000423 Arabidopsis thaliana chloroplast ge... 127 3e-27
gb|AF180018.1|AF180018 Araucaria araucana 119 8e-25
gb|AF180012.1|AF180012 Sequoia sempervirens 119 8e-25
gb|AF223227.1|AF223227 Pisum sativum photosystem protein (p... 111 2e-22
gb|AF180017.1|AF180017 Ephedra tweediana 111 2e-22
gb|AF180016.1|AF180016 Drimys winteri 111 2e-22
emb|AJ400848.1|SOL400848 Spinacia oleracea complete chlorop... 111 2e-22
emb|X05423.1|CHPSAA12 Pisum sativum chloroplast psaA1 and p... 111 2e-22
dbj|AB001684.1|AB001684 Chlorella vulgaris C-27 chloroplast... 105 1e-20
gb|AC093544.8| Medicago truncatula chloroplast, complete ge... 103 5e-20
emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genom... 103 5e-20
dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, co... 101 2e-19
emb|AJ316582.1|ABE316582 Atropa belladonna Complete Plastid... 100 8e-19
gb|AF180024.1|AF180024 Huperzia squarrosa 100 8e-19
gb|AF180023.1|AF180023 Psilotum nudum 100 8e-19
emb|Z00044.1|CHNTXX Nicotiana tabacum chloroplast genome DNA 100 8e-19
dbj|AP004638.1|AP004638 Psilotum nudum chloroplast DNA, com... 100 8e-19
dbj|AP002983.1|AP002983 Lotus japonicus chloroplast DNA, co... 96 1e-17
emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chl... 88 3e-15
dbj|AB044184.1|AB044184S1 Volvox carteri f. kawasakiensis c... 86 1e-14
gb|AF180013.1|AF180013 Welwitschia mirabilis 82 2e-13
gb|AF180021.1|AF180021 Asplenium nidus 80 7e-13
dbj|AB044234.1|AB044233S2 Astrephomene gubernaculifera chlo... 76 1e-11
dbj|AB044200.1|AB044200S1 Eudorina elegans chloroplast psaA... 76 1e-11
dbj|AB044188.1|AB044188 Volvox rousseletii chloroplast psaA... 76 1e-11
dbj|AB044186.1|AB044186 Volvox barberi chloroplast psaA gen... 76 1e-11
gb|AF180014.1|AF180014 Marsilea botrycarpa 74 4e-11
dbj|AB044193.1|AB044193S1 Pleodorina japonica chloroplast p... 72 2e-10
dbj|AB044423.1|AB044423 Paulschulzia pseudovolvox chloropla... 70 7e-10
dbj|AB044417.1|AB044417 Chlamydomonas debaryana chloroplast... 70 7e-10
dbj|AB044231.1|AB044231 Pandorina morum chloroplast psaA ge... 70 7e-10
dbj|AB044223.1|AB044223 Volvulina steinii chloroplast psaA ... 70 7e-10
dbj|AB044224.1|AB044224 Volvulina steinii chloroplast psaA ... 70 7e-10
dbj|AB044187.1|AB044187 Volvox globator chloroplast psaA ge... 70 7e-10
dbj|AB044208.1|AB044207S2 Eudorina unicocca chloroplast psa... 68 3e-09
dbj|AB044205.1|AB044204S2 Eudorina unicocca chloroplast psa... 68 3e-09
dbj|AB044196.1|AB044195S2 Pleodorina indica chloroplast psa... 68 3e-09
dbj|AB044235.1|AB044235 Astrephomene gubernaculifera chloro... 68 3e-09
dbj|AB044216.1|AB044216 Yamagishiella unicocca chloroplast ... 68 3e-09
dbj|AB044213.1|AB044213 Yamagishiella unicocca chloroplast ... 68 3e-09
dbj|AB044210.1|AB044210 Eudorina cylindrica chloroplast psa... 68 3e-09
dbj|AB044199.1|AB044199 Eudorina elegans chloroplast psaA g... 68 3e-09
gb|AF180019.1|AF180019 Equisetum palustre 66 1e-08
dbj|AB044198.1|AB044198 Eudorina illinoisensis chloroplast ... 66 1e-08
gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete... 66 1e-08
dbj|AB044182.1|AB044182 Volvox aureus chloroplast psaA gene... 64 4e-08
gb|AF180022.1|AF180022 Adiantum capillus-veneris 62 2e-07
dbj|AB044211.1|AB044211S1 Platydorina caudata chloroplast p... 62 2e-07
dbj|AB044203.1|AB044202S2 Eudorina elegans chloroplast psaA... 62 2e-07
dbj|AB044421.1|AB044421 Lobomonas monstruosa chloroplast ps... 62 2e-07
dbj|AB044228.1|AB044228 Pandorina morum chloroplast psaA ge... 62 2e-07
dbj|AB044227.1|AB044227 Pandorina morum chloroplast psaA ge... 62 2e-07
dbj|AB044225.1|AB044225 Volvulina boldii chloroplast psaA g... 62 2e-07
dbj|AB044183.1|AB044183 Volvox dissipatrix chloroplast psaA... 62 2e-07
dbj|AB044237.1|AB044236S2 Astrephomene perforata chloroplas... 60 7e-07
dbj|AB044230.1|AB044229S2 Pandorina morum chloroplast psaA ... 60 7e-07
dbj|AB044215.1|AB044214S2 Yamagishiella unicocca chloroplas... 60 7e-07
dbj|AB044420.1|AB044420 Vitreochlamys ordinata chloroplast ... 60 7e-07
dbj|AB044191.1|AB044190S2 Pleodorina californica chloroplas... 58 3e-06
emb|X64102.1|SCR1733 S.cereale DNA for dispersed repeat seq... 58 3e-06
emb|X64101.1|SCR1732 S.cereale DNA for dispersed repeat seq... 58 3e-06
gb|AF041468.1| Guillardia theta 56 1e-05
gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 54 4e-05
emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloropl... 54 4e-05
dbj|AB044222.1|AB044221S2 Volvulina steinii chloroplast psa... 54 4e-05
dbj|AB044242.1|AB044242 Gonium pectorale chloroplast psaA g... 54 4e-05
dbj|AB044419.1|AB044419 Chlamydomonas reinhardtii chloropla... 52 2e-04
dbj|AB044226.1|AB044226 Pandorina morum chloroplast psaA ge... 52 2e-04
emb|X05847.1|CHCRPS13 C.reinhardtii chloroplast ps1A1 gene ... 52 2e-04
dbj|AB044218.1|AB044217S2 Volvulina compacta chloroplast ps... 50 6e-04
dbj|AB013101.1|AB013101 Lycopersicon esculentum LE-ACO4 mRN... 48 0.003
gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complet... 48 0.003
emb|AJ009799.1|GGA9799 Gallus gallus mRNA for ABC transport... 48 0.003
dbj|AP000397.1|AP000396S2 Beta vulgaris mitochondrial genom... 48 0.003
dbj|AB008450.1|AB008450 Beta vulgaris mitochondrial rps7 ge... 48 0.003
gb|AF166114.1|AF166114 Mesostigma viride 46 0.010
dbj|AB044239.1|AB044239S1 Gonium multicoccum chloroplast ps... 46 0.010
dbj|AB044415.1|AB044415 Tetrabaena socialis chloroplast psa... 46 0.010
dbj|AB044241.1|AB044241 Gonium octonarium chloroplast psaA ... 46 0.010
dbj|AB044232.1|AB044232 Pandorina colemaniae chloroplast ps... 46 0.010
dbj|AB044416.1|AB044416 Basichlamys sacculifera chloroplast... 46 0.010
gb|M18165.1|SYOPSAAB Cyanobacterium sp. (PCC 7002) P700 chl... 46 0.010
dbj|AB044244.1|AB044244 Gonium viridistellatum chloroplast ... 44 0.040
emb|AJ315149.1|OMY315149 Oncorhynchus mykiss mRNA for CC ch... 42 0.16
dbj|AB019562.1|AB019562 Homo sapiens mRNA expressed only in... 42 0.16
emb|Y10552.1|HSNCL3PRT H.sapiens mRNA for calpain-like prot... 42 0.16
gb|AF139835.1|AF139835 Populus tremula x Populus tremuloides 40 0.62
gb|AF156489.1|AF156489 Homo sapiens chromosome 7 map 7q11.23 40 0.62
gb|AF139768.1|AF139768 Homo sapiens chromosome 7 map 7q33 40 0.62
gb|AF005654.1|AF005654 Homo sapiens 40 0.62
emb|AJ293853.1|KPN293853 Klebsiella pneumoniae partial YC04... 40 0.62
emb|AJ293760.1|ABI293760 Agaricus bisporus mRNA for putativ... 40 0.62
emb|AJ292929.1|ABI292929 Agaricus bisporus mRNA for CEL6 pr... 40 0.62
dbj|AB072357.1|AB072357 Homo sapiens mRNA for hSSH-1B, comp... 40 0.62
emb|X95407.1|RCDSTNORG R.capsulatus dimethyl sulfoxide/trim... 40 0.62
dbj|AB019574.1|AB019574 Homo sapiens mRNA expressed only in... 40 0.62
dbj|AB019572.1|AB019572 Homo sapiens mRNA expressed only in... 40 0.62
dbj|AB019567.1|AB019567 Homo sapiens mRNA expressed only in... 40 0.62
gb|AC012410.10| Homo sapiens chromosome 8, clone RP11-354A3... 38 2.4
gb|AF107491.1|AF107491 Hexamita sp. 38 2.4
gb|AC016080.5|AC016080 Homo sapiens, clone RP11-23N14, comp... 38 2.4
gb|AF042168.1|AF042168 Onchocerca volvulus 38 2.4
gb|AF222713.1|AF222713 Bos taurus 38 2.4
gb|AF271776.1|AF271776 Homo sapiens DC48 mRNA, complete cds 38 2.4
gb|AF072534.1|AF072534 Capsicum annuum 38 2.4
gb|AF002248.2|AF002248 Pisum sativum 38 2.4
gb|AF106660.1|AF106660 Lycopersicon esculentum 38 2.4
emb|AJ290944.2|MMU290944 Mus musculus mRNA for a stretch re... 38 2.4
emb|AJ279852.1|MMU279852 Mus musculus partial mRNA for hypo... 38 2.4
emb|AJ279850.1|MMU279850 Mus musculus partial mRNA for hypo... 38 2.4
emb|AJ279849.1|MMU279849 Mus musculus partial mRNA for hypo... 38 2.4
emb|AJ279847.1|MMU279847 Mus musculus partial mRNA for hypo... 38 2.4
emb|AJ279846.1|MMU279846 Mus musculus partial mRNA for hypo... 38 2.4
gb|AF086603.1|AF086603 Ceratopteris richardii strain Hn-n 38 2.4
gb|AF151726.1|AF151726 Dianthus caryophyllus clone CFMI-6 38 2.4
gb|AF118559.1|AF118559 Avena fatua strain AN265 38 2.4
gb|AF095771.1|AF095771 Homo sapiens 38 2.4
gb|AF120321.1|AF120321 Mus musculus clone an01-h01 mRNA seq... 38 2.4
gb|AF061027.1|AF061027 Vernicia fordii 38 2.4
gb|U58918.1|ATU58918 Arabidopsis thaliana MEK kinase (MAP3K... 38 2.4
emb|AJ293762.1|ABI293762 Snythetic construct chimeric mRNA ... 38 2.4
gb|AF064741.1|AF064741 Sus scrofa 38 2.4
gb|AF051151.1|AF051151 Homo sapiens chromosome 1 map 1q41-q42 38 2.4
emb|AJ293850.1|KPN293850 Klebsiella pneumoniae partial EVGA... 38 2.4
emb|AJ293849.1|KPN293849 Klebsiella pneumoniae contig regio... 38 2.4
emb|AJ293848.1|KPN293848 Klebsiella pneumoniae contig regio... 38 2.4
emb|AJ293847.1|KPN293847 Klebsiella pneumoniae contig regio... 38 2.4
emb|AJ293846.1|KPN293846 Klebsiella pneumoniae transposon T... 38 2.4
emb|AJ276857.1|KPN276857 Klebsiella pneumoniae partial SL04... 38 2.4
emb|AJ276855.1|KPN276855 Klebsiella pneumoniae partial SL03... 38 2.4
emb|AJ276853.1|KPN276853 Klebsiella pneumoniae partial SL02... 38 2.4
emb|AJ276850.1|KPN276850 Klebsiella pneumoniae partial SL01... 38 2.4
emb|AJ276849.1|KPN276849 Klebsiella pneumoniae partial SL01... 38 2.4
emb|AJ276466.1|KPN276466 Klebsiella pneumoniae contig regio... 38 2.4
emb|AJ250102.1|OCU250102 Oryctolagus cuniculus partial mRNA... 38 2.4
emb|AJ276856.1|KPN276856 Klebsiella pneumoniae partial SL03... 38 2.4
emb|AJ010090.1|ATH010090 Arabidopsis thaliana mRNA for MAP3... 38 2.4
dbj|AP003934.3| Oryza sativa (japonica cultivar-group) geno... 38 2.4
dbj|AB060695.1| Homo sapiens TLR5 mRNA for Toll-like recept... 38 2.4
emb|X58825.1|SYPSAAB Synechocystis 6803 psaA and psaB genes... 38 2.4
dbj|D90906.1|D90906 Synechocystis sp. PCC 6803 DNA, complet... 38 2.4
dbj|AB044220.1|AB044220 Volvulina pringsheimii chloroplast ... 38 2.4
dbj|AB047592.1|AB047592 Trichophyton mentagrophytes mRNA fo... 38 2.4
dbj|AB044662.1|AB044662 Prunus persica PP-ACS1 mRNA for 1-a... 38 2.4
dbj|AP001671.1|AP001671 Homo sapiens genomic DNA, chromosom... 38 2.4
emb|Y11312.1|HSC2PI3K H.sapiens mRNA for phosphoinositide 3... 38 2.4
dbj|AP000432.4|AP000432 Homo sapiens genomic DNA, chromosom... 38 2.4
dbj|D78130.1|D78130 Homo sapiens mRNA for squalene epoxidas... 38 2.4
dbj|AB019573.1|AB019573 Homo sapiens mRNA expressed only in... 38 2.4
dbj|AB019571.1|AB019571 Homo sapiens mRNA expressed only in... 38 2.4
dbj|AB019570.1|AB019570 Homo sapiens mRNA expressed only in... 38 2.4
dbj|AB019569.1|AB019569 Homo sapiens mRNA expressed only in... 38 2.4
dbj|AB019568.1|AB019568 Homo sapiens mRNA expressed only in... 38 2.4
dbj|AB019566.1|AB019566 Homo sapiens mRNA expressed only in... 38 2.4
dbj|AB019565.1|AB019565 Homo sapiens mRNA expressed only in... 38 2.4
dbj|AB019564.1|AB019564 Homo sapiens mRNA expressed only in... 38 2.4
dbj|AB019563.1|AB019563 Homo sapiens mRNA expressed only in... 38 2.4
emb|AJ000249.1|ASCZSODM Acanthopagrus aschlegeli mRNA for C... 38 2.4
ref|NM_139017.1| Homo sapiens similar to CRL3 protein (CRL3... 36 9.7
gb|AF097021.1| Homo sapiens 36 9.7
ref|NM_130806.2| Homo sapiens similar to G protein coupled ... 36 9.7
gb|AF022770.2| Mus musculus strain BALB/c 36 9.7
ref|NM_007227.2| Homo sapiens G protein-coupled receptor 45... 36 9.7
gb|AC021761.8| Homo sapiens chromosome 11, clone RP11-361M6... 36 9.7
gb|AC107876.2| Homo sapiens chromosome 15, clone RP11-1023E... 36 9.7
gb|AC103871.2| Homo sapiens chromosome 15, clone RP11-730G1... 36 9.7
gb|AF245220.1| Homo sapiens 36 9.7
gb|AF403384.2| Homo sapiens chromosome 11 map 11q13 36 9.7
gb|AF075584.1|TGFA2 Homo sapiens transforming growth factor... 36 9.7
gb|AF075583.1|TGFA1 Homo sapiens transforming growth factor... 36 9.7
gb|L77884.1|MUSLYST Mus musculus Lyst (Lyst) mRNA, complete... 36 9.7
gb|AF106913.1|AF106913 Homo sapiens CRL3 protein (CRL3) mRN... 36 9.7
gb|AF039086.1|AF039086 Pseudomicrothorax dubius articulin 1... 36 9.7
gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-... 36 9.7
gb|AC008935.8|AC008935 Homo sapiens chromosome 5 clone CTD-... 36 9.7
gb|AF050198.1|AF050198 Homo sapiens 36 9.7
gb|AF035526.1|AF035526 Mus musculus 36 9.7
gb|AF074706.1|AF074706 Bos taurus 36 9.7
emb|AJ318062.1|CNE318062 Cryptococcus neoformans mRNA for A... 36 9.7
emb|AJ130894.1|HSA130894 Homo sapiens mRNA for transcriptio... 36 9.7
emb|AJ306902.1|RCO306902 Ricinus communis mRNA for iron tra... 36 9.7
emb|AJ133126.1|RNO33126 Rattus norvegicus mRNA for kelch-li... 36 9.7
emb|AL645669.11| Mouse DNA sequence from clone RP23-26A10 o... 36 9.7
emb|AL645798.2| Zebrafish DNA sequence from clone XX-227H09... 36 9.7
emb|AL589990.8|AL589990 Human DNA sequence from clone RP11-... 36 9.7
gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides 36 9.7
emb|AJ416426.1|MMU416426 Mus musculus mRNA for damaged-DNA ... 36 9.7
gb|AF117260.1|AF117260 Ceratopteris richardii ribosomal pro... 36 9.7
gb|AF026274.1|AF026274 Mus musculus 36 9.7
gb|AF128458.1|AF128458 Homo sapiens 36 9.7
gb|AF187849.1|AF187849 Aeromonas veronii bv. sobria CopA (c... 36 9.7
gb|L77146.1|ZEFHSC7R Danio rerio heat shock cognate (hsc70)... 36 9.7
gb|AF012324.1|AF012324 Mus musculus 36 9.7
gb|AF169248.2|AF169248 Opsanus beta 36 9.7
emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integri... 36 9.7
emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate ox... 36 9.7
gb|AF007817.1|AF007817 Mus musculus IPL1 and aurora related... 36 9.7
gb|AF127772.1|AF127772 Homo sapiens cell-line E8CASS clone ... 36 9.7
emb|AJ319726.1|MMU319726 Mus musculus mRNA for neurotrophin... 36 9.7
emb|AL139420.13|AL139420 Human DNA sequence from clone RP4-... 36 9.7
gb|AF133731.2|AF133731 Rattus norvegicus strain Copenhagen 36 9.7
gb|AF112153.1|AF112153 Rattus norvegicus 36 9.7
gb|AF158379.1|AF158379 Rattus norvegicus clone 49 strain Wi... 36 9.7
emb|AJ279839.1|MMU279839 Mus musculus partial mRNA for hypo... 36 9.7
gb|U81599.1|HSU81599 Homo sapiens chromosome 17 map 17q21.2 36 9.7
gb|AF125392.1|AF125392 Homo sapiens 36 9.7
gb|AF098517.1|AF098517 Penicillium citrinum strain 52-5 36 9.7
emb|AJ006225.1|MCR6225 Mesembryanthemum crystallinum mRNA f... 36 9.7
gb|AC004044.1|AC004044 Arabidopsis thaliana BAC T5J8 from c... 36 9.7
gb|U55215.1|CPU55215 Cavia porcellus interleukin-5 receptor... 36 9.7
gb|AF033850.1|AF033850 Homo sapiens 36 9.7
gb|AF067650.1|AF067650 Rattus norvegicus strain Sprague-Dawley 36 9.7
emb|AJ310908.1|FVE310908 Fucus vesiculosus mRNA for ALA deh... 36 9.7
gb|AF039201.1| Pinus caribaea 36 9.7
gb|AF053405.1|AF053405 Mus musculus 36 9.7
emb|AJ300524.2|PEU300524 Populus euramericana mRNA for puta... 36 9.7
gb|AF074720.1|AF074720 Dicentrarchus labrax 36 9.7
emb|AJ272202.1|ATH272202 Arabidopsis thaliana mRNA for mito... 36 9.7
gb|AF061514.1|AF061514 Gossypium hirsutum 36 9.7
gb|AF093414.1|AF093414 Saguinus oedipus 36 9.7
gb|AF086824.1|AF086824 Mus musculus 36 9.7
gb|AF086823.1|AF086823 Mus musculus 36 9.7
gb|AF020642.1|AF020642 Homo sapiens clone 13010.B17 36 9.7
gb|AF064867.1|AF064867 Homo sapiens 36 9.7
gb|AF084928.1|AF084928 Homo sapiens erythroblast macrophage... 36 9.7
gb|AF061266.1|AF061266 Rattus norvegicus strain Sprague-Dawley 36 9.7
gb|AF093139.1|AF093139 Rattus norvegicus strain Sprague Dawley 36 9.7
gb|AF022861.1|AF022861 Mus musculus strain BALB/c 36 9.7
gb|AF022858.1|AF022858 Mus musculus strain BALB/c 36 9.7
gb|AF022857.1|AF022857 Mus musculus strain BALB/c 36 9.7
gb|AF022856.1|AF022856 Mus musculus strain BALB/c 36 9.7
gb|AF022855.1|AF022855 Mus musculus strain BALB/c 36 9.7
gb|AF022854.1|AF022854 Mus musculus strain BALB/c 36 9.7
gb|U77330.1|MMU77330 Mus musculus extracellular matrix prot... 36 9.7
gb|U29343.1|HSU29343 Homo sapiens hyaluronan receptor (RHAM... 36 9.7
emb|AL353610.7|AL353610 Human DNA sequence from clone RP11-... 36 9.7
emb|AJ252088.1|SDU252088 Solanum dulcamara mRNA for gibbere... 36 9.7
gb|AF038664.1|AF038664 Homo sapiens chromosome 18 map 18q11 36 9.7
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
Length = 134545
Score = 172 bits (87), Expect = 6e-41
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40274 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 40333
Query: 79 agcactcatggtatcattatgaatgta 105
|||||||||||||||||||||||||||
Sbjct: 40334 agcactcatggtatcattatgaatgta 40360
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
Length = 140384
Score = 141 bits (71), Expect = 2e-31
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 42162 agcaaagatgggttgtaattgtatggcggcatccgaaaacatatcttggggacggcctaa 42221
Query: 79 agcactcatggtatcattatgaatgta 105
|||||||||||||||||||||||||||
Sbjct: 42222 agcactcatggtatcattatgaatgta 42248
>emb|X15901.1|CHOSXX Oryza sativa complete chloroplast genome
Length = 134525
Score = 141 bits (71), Expect = 2e-31
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 39808 agcaaagatcggttgtaattgtatggcggtatccgaaaacatatcttggggacgacctaa 39867
Query: 79 agcactcatggtatcattatgaatgta 105
|||||||||||||||||||||||||||
Sbjct: 39868 agcactcatggtatcattatgaatgta 39894
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0557A01
Length = 147201
Score = 141 bits (71), Expect = 2e-31
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 64038 agcaaagatcggttgtaattgtatggcggtatccgaaaacatatcttggggacgacctaa 64097
Query: 79 agcactcatggtatcattatgaatgta 105
|||||||||||||||||||||||||||
Sbjct: 64098 agcactcatggtatcattatgaatgta 64124
>gb|M11203.1|MZECPPSI Maize chloroplast photosystem I ps1A1 and ps1A2 genes, complete cds
Length = 5272
Score = 141 bits (71), Expect = 2e-31
Identities = 83/87 (95%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 2166 agcaaagatgggttgtaattgtatggcggcatccgaaaacatatcttggggacggcctaa 2107
Query: 79 agcactcatggtatcattatgaatgta 105
|||||||||||||||||||||||||||
Sbjct: 2106 agcactcatggtatcattatgaatgta 2080
>gb|AC074232.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone
OSJNBb0005J14 map E10477S, complete sequence
Length = 116932
Score = 133 bits (67), Expect = 6e-29
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 31252 agcaaagatcggttgtaattgtatggcggtatctgaaaacatatcttggggacgacctaa 31311
Query: 79 agcactcatggtatcattatgaatgta 105
|||||||||||||||||||||||||||
Sbjct: 31312 agcactcatggtatcattatgaatgta 31338
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
chromosome 10, complete sequence
Length = 134933
Score = 133 bits (67), Expect = 6e-29
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 112990 agcaaagatcggttgtatttgtatggcggtatccgaaaacatatcttggggacgacctaa 113049
Query: 79 agcactcatggtatcattatgaatgta 105
|||||||||||||||||||||||||||
Sbjct: 113050 agcactcatggtatcattatgaatgta 113076
>gb|AF223226.1|AF223226 Ginkgo biloba photosystem protein (psaA) gene, partial cds;
chloroplast gene for chloroplast product
Length = 2163
Score = 127 bits (64), Expect = 3e-27
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 1416 agcaaagataggttgtaattgtatggcagtatctgaaaacatatcttgaggacgtcctaa 1357
Query: 79 agcactcatggtatcattatgaat 102
||| ||||| ||||||||||||||
Sbjct: 1356 agcgctcatagtatcattatgaat 1333
>gb|AF180025.1|AF180025 Torreya californica
Length = 2157
Score = 127 bits (64), Expect = 3e-27
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||
Sbjct: 1416 agcaaagataggttgtaattgtatagcagtatctgaaaacatatcttgaggacgtcctaa 1357
Query: 79 agcactcatggtatcattatgaat 102
||||||||| ||||||||||||||
Sbjct: 1356 agcactcatagtatcattatgaat 1333
>gb|AF180020.1|AF180020 Angiopteris evecta
Length = 2163
Score = 127 bits (64), Expect = 3e-27
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 1416 agcaaagataggttgtaattgtatggcagtatctgaaaacatatcttgaggacgtcctaa 1357
Query: 79 agcactcatggtatcattatgaat 102
||| ||||| ||||||||||||||
Sbjct: 1356 agcgctcatagtatcattatgaat 1333
>gb|AF180015.1|AF180015 Cycas revoluta
Length = 2151
Score = 127 bits (64), Expect = 3e-27
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 1410 agcaaagataggttgtaattgtatagcagtatccgaaaacatatcttgaggacgccctaa 1351
Query: 79 agcactcatggtatcattatgaat 102
||| ||||| ||||||||||||||
Sbjct: 1350 agcgctcatagtatcattatgaat 1327
>gb|AF180011.1|AF180011 Encephalartos lebomboensis
Length = 2159
Score = 127 bits (64), Expect = 3e-27
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 1412 agcaaagataggttgtaattgtatagcagtatccgaaaacatatcttgaggacgtcctaa 1353
Query: 79 agcactcatggtatcattatgaat 102
||| ||||| ||||||||||||||
Sbjct: 1352 agcgctcatagtatcattatgaat 1329
>dbj|AP000423.1|AP000423 Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
strain:Columbia
Length = 154478
Score = 127 bits (64), Expect = 3e-27
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 40415 agcaaagactggttgtaattgtatagcagtatctgaaaacatatcttgtggacgccctaa 40474
Query: 79 agcactcatggtatcattatgaat 102
||||||||||||||||||||||||
Sbjct: 40475 agcactcatggtatcattatgaat 40498
>gb|AF180018.1|AF180018 Araucaria araucana
Length = 2148
Score = 119 bits (60), Expect = 8e-25
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 23 aagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagca 82
|||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||
Sbjct: 1400 aagataggttgtaattgtatagcagtatctgaaaacatatcttgaggacgtcctaaagca 1341
Query: 83 ctcatggtatcattatgaat 102
||||| ||||||||||||||
Sbjct: 1340 ctcatagtatcattatgaat 1321
>gb|AF180012.1|AF180012 Sequoia sempervirens
Length = 2162
Score = 119 bits (60), Expect = 8e-25
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||
Sbjct: 1416 agcaaagataggttgtaattgtatagcagtatctgaaaacatatctttaggacgtcctaa 1357
Query: 79 agcactcatggtatcattatgaat 102
||||||||| ||||||||||||||
Sbjct: 1356 agcactcatagtatcattatgaat 1333
>gb|AF223227.1|AF223227 Pisum sativum photosystem protein (psaA) gene, partial cds;
chloroplast gene for chloroplast product
Length = 2160
Score = 111 bits (56), Expect = 2e-22
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||| |||||||||||||| |||||||| |||||||||||||| || || |||||
Sbjct: 1414 agcaaagacgggttgtaattgtatagcagtatctgaaaacatatcttgagggcgccctaa 1355
Query: 79 agcactcatggtatcattatgaat 102
||||||||||||||||||||||||
Sbjct: 1354 agcactcatggtatcattatgaat 1331
>gb|AF180017.1|AF180017 Ephedra tweediana
Length = 2160
Score = 111 bits (56), Expect = 2e-22
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| || |||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 1416 agcaaatattggttgtaattgtatagcagtatccgaaaacatatcttgaggacgccctaa 1357
Query: 79 agcactcatggtatcattatgaat 102
|||||||| ||||||||||||||
Sbjct: 1356 tgcactcatagtatcattatgaat 1333
>gb|AF180016.1|AF180016 Drimys winteri
Length = 2151
Score = 111 bits (56), Expect = 2e-22
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
||||||||| |||||||||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 1407 agcaaagatgggttgtaattgtatagcggtatctgaaaacatatcttggggacgccctaa 1348
Query: 79 agcactcatggtatcattatgaat 102
||| ||||||||||||||||||||
Sbjct: 1347 agcgctcatggtatcattatgaat 1324
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
Length = 150725
Score = 111 bits (56), Expect = 2e-22
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 23 aagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagca 82
|||| ||||||||||||||| || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 39114 aagacaggttgtaattgtatagcggtatctgaaaacatatcttgaggacgccctaaagca 39173
Query: 83 ctcatggtatcattatgaat 102
||||||||||||||||||||
Sbjct: 39174 ctcatggtatcattatgaat 39193
>emb|X05423.1|CHPSAA12 Pisum sativum chloroplast psaA1 and psaA2 genes for P700 chlorophyll
a-apoproteins (84 and 82 kD polypeptides)
Length = 4997
Score = 111 bits (56), Expect = 2e-22
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||| ||||||||||||||| || ||||| |||||||||||||| || || |||||
Sbjct: 1921 agcaaagacaggttgtaattgtatagcggtatctgaaaacatatcttgagggcgccctaa 1862
Query: 79 agcactcatggtatcattatgaat 102
||||||||||||||||||||||||
Sbjct: 1861 agcactcatggtatcattatgaat 1838
>dbj|AB001684.1|AB001684 Chlorella vulgaris C-27 chloroplast DNA, complete sequence
Length = 150613
Score = 105 bits (53), Expect = 1e-20
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 29 ggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcatg 88
|||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 80290 ggttgtaattgtattgctgtatccgaaaacatatcttgtggacgacctaaagcactcatg 80231
Query: 89 gtatc 93
|||||
Sbjct: 80230 gtatc 80226
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
Length = 124033
Score = 103 bits (52), Expect = 5e-20
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||| |||||||||||||| || ||||| |||||||||||||| || || |||||
Sbjct: 103777 agcaaagactggttgtaattgtatagcggtatcagaaaacatatcttgagggcgccctaa 103836
Query: 79 agcactcatggtatcattatgaat 102
||||||||||||||||||||||||
Sbjct: 103837 agcactcatggtatcattatgaat 103860
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
Length = 121024
Score = 103 bits (52), Expect = 5e-20
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| | |||||||||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 45765 agcaaaaacaggttgtaattgaatagcagtatctgaaaacatatcttgaggacgtcctaa 45824
Query: 79 agcactcatggtatcattatgaat 102
||||||||| ||||||||||||||
Sbjct: 45825 agcactcatcgtatcattatgaat 45848
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
Length = 119707
Score = 101 bits (51), Expect = 2e-19
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 20 gcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaa 79
||||||||||||||||||||||| |||||||| || ||||||||||| ||||| |||| |
Sbjct: 75269 gcaaagataggttgtaattgtatagcagtatctgagaacatatcttgaggacgtcctaga 75210
Query: 80 gcactcatggtatcattatgaat 102
|| ||||| ||||||||||||||
Sbjct: 75209 gcgctcatagtatcattatgaat 75187
>emb|AJ316582.1|ABE316582 Atropa belladonna Complete Plastid Chromosome, strain Ab5p(kan)
Length = 156687
Score = 99.6 bits (50), Expect = 8e-19
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 29 ggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcatg 88
|||||||||||||| || ||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 41802 ggttgtaattgtatagcggtatctgaaaacatatcttgaggacgccctaaagcgctcatg 41861
Query: 89 gtatcattatgaat 102
||||||||||||||
Sbjct: 41862 gtatcattatgaat 41875
>gb|AF180024.1|AF180024 Huperzia squarrosa
Length = 2145
Score = 99.6 bits (50), Expect = 8e-19
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 28 aggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcat 87
||||||||||||||| ||||||||||||||||| ||||| ||||| || |||||||||||
Sbjct: 1404 aggttgtaattgtatagcagtatccgaaaacatgtcttggggacgtcccaaagcactcat 1345
Query: 88 ggtatcattatgaatgta 105
||||||||||| |||||
Sbjct: 1344 agtatcattatggatgta 1327
>gb|AF180023.1|AF180023 Psilotum nudum
Length = 2160
Score = 99.6 bits (50), Expect = 8e-19
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 20 gcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaa 79
|||||||| |||||||||||||| |||||||| |||||||||||||| ||||| || | |
Sbjct: 1411 gcaaagatgggttgtaattgtatagcagtatctgaaaacatatcttgaggacgtcccaga 1352
Query: 80 gcactcatggtatcattatgaatgta 105
|||||||| ||||||||||| |||||
Sbjct: 1351 gcactcatagtatcattatggatgta 1326
>emb|Z00044.1|CHNTXX Nicotiana tabacum chloroplast genome DNA
Length = 155939
Score = 99.6 bits (50), Expect = 8e-19
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 29 ggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcatg 88
|||||||||||||| || ||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 42054 ggttgtaattgtatagcggtatctgaaaacatatcttgaggacgccctaaagcgctcatg 42113
Query: 89 gtatcattatgaat 102
||||||||||||||
Sbjct: 42114 gtatcattatgaat 42127
>dbj|AP004638.1|AP004638 Psilotum nudum chloroplast DNA, complete genome
Length = 138829
Score = 99.6 bits (50), Expect = 8e-19
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 20 gcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaa 79
|||||||| |||||||||||||| |||||||| |||||||||||||| ||||| || | |
Sbjct: 43347 gcaaagatgggttgtaattgtatagcagtatctgaaaacatatcttgaggacgtcccaga 43406
Query: 80 gcactcatggtatcattatgaatgta 105
|||||||| ||||||||||| |||||
Sbjct: 43407 gcactcatagtatcattatggatgta 43432
>dbj|AP002983.1|AP002983 Lotus japonicus chloroplast DNA, complete genome
Length = 150519
Score = 95.6 bits (48), Expect = 1e-17
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| || ||||| |||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 20459 agcaaaaatgggttgcaattgtatagctgtatctgaaaacatatcttggggacgccctaa 20400
Query: 79 agcactcatggtatcattatgaat 102
|||||||||||||||||||||||
Sbjct: 20399 cgcactcatggtatcattatgaat 20376
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
sequence
Length = 163935
Score = 87.7 bits (44), Expect = 3e-15
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||||| |||||||||||||| || ||||| |||||||||||||| || || |||||
Sbjct: 24766 agcaaagacgggttgtaattgtatagcggtatcagaaaacatatcttgagggcgtcctaa 24707
Query: 79 agcactcatggtatcattatgaat 102
||| ||||||||||| ||||||||
Sbjct: 24706 agcgctcatggtatcgttatgaat 24683
>dbj|AB044184.1|AB044184S1 Volvox carteri f. kawasakiensis chloroplast psaA gene for P700
chlorophyll a-protein A1, exon 1, strain:NIES-732
Length = 1038
Score = 85.7 bits (43), Expect = 1e-14
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| |||||||| | ||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 885 agcaaaaataggttgaagctgtattgcagtatctgagaacatatcttgaggacgacctaa 826
Query: 79 agcactcatggtatcattatgaatgta 105
|||||||||||||||||| || |||||
Sbjct: 825 agcactcatggtatcattgtggatgta 799
>gb|AF180013.1|AF180013 Welwitschia mirabilis
Length = 2162
Score = 81.8 bits (41), Expect = 2e-13
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 26 ataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactc 85
|||||||||||||| || || || ||||||||||||||||| || || ||||| ||||||
Sbjct: 1411 ataggttgtaattggatagccgtgtccgaaaacatatcttgagggcgtcctaacgcactc 1352
Query: 86 atggtatcattatgaat 102
|| ||||||||||||||
Sbjct: 1351 atagtatcattatgaat 1335
>gb|AF180021.1|AF180021 Asplenium nidus
Length = 2156
Score = 79.8 bits (40), Expect = 7e-13
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| || |||||||| || ||||| |||||||||||||||||||| ||||| || ||
Sbjct: 1410 agcaaatatcggttgtaactgaatggcggtatccgaaaacatatcttggggacgtcccaa 1351
Query: 79 agcactcatggtatcattatgaat 102
|||||||| || |||||||||||
Sbjct: 1350 ggcactcatagtgtcattatgaat 1327
>dbj|AB044234.1|AB044233S2 Astrephomene gubernaculifera chloroplast psaA gene for P700
chlorophyll a-protein A1, exon 2 and partial cds,
strain:NIES-418
Length = 1214
Score = 75.8 bits (38), Expect = 1e-11
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 583 gcagtatcagagaacatatcttgaggacgacctaaagcactcattgtatcattatggatg 524
Query: 104 ta 105
||
Sbjct: 523 ta 522
>dbj|AB044200.1|AB044200S1 Eudorina elegans chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 1, strain:UTEX 1205
Length = 1038
Score = 75.8 bits (38), Expect = 1e-11
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||||||||||||| |||||||| ||||||
Sbjct: 860 gcagtatctgagaacatatcttgaggacgacctaaagcactcattgtatcattgtgaatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>dbj|AB044188.1|AB044188 Volvox rousseletii chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 1862
Length = 1491
Score = 75.8 bits (38), Expect = 1e-11
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 860 gcagtatctgagaacatgtcttgtggacgacctaaagcactcattgtatcattgtgaatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>dbj|AB044186.1|AB044186 Volvox barberi chloroplast psaA gene for P700 chlorophyll a-protein
A1, partial cds, strain:UTEX 804
Length = 1491
Score = 75.8 bits (38), Expect = 1e-11
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 860 gcagtatctgagaacatgtcttgtggacgacctaaagcactcattgtatcattgtgaatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>gb|AF180014.1|AF180014 Marsilea botrycarpa
Length = 2161
Score = 73.8 bits (37), Expect = 4e-11
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 29 ggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcatg 88
|||||||| || || || |||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 1404 ggttgtaactgaattgcggtatccgaaaacatatcttggggacgtcccaaagcactcatg 1345
Query: 89 gtatc 93
|||||
Sbjct: 1344 gtatc 1340
>dbj|AB044193.1|AB044193S1 Pleodorina japonica chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 1, strain:UTEX 2523
Length = 1038
Score = 71.9 bits (36), Expect = 2e-10
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 38 tgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcatta 97
||||| || ||||| || ||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 866 tgtattgctgtatctgagaacatatcttgaggacgacctaaagcactcatagtatcattg 807
Query: 98 tgaatgta 105
||||||||
Sbjct: 806 tgaatgta 799
>dbj|AB044423.1|AB044423 Paulschulzia pseudovolvox chloroplast psaA gene for photosystem I
P700 chlorophyll a apoprotein A1, strain:UTEX 167
Length = 1067
Score = 69.9 bits (35), Expect = 7e-10
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| | ||||||||| || || || || || || ||||||||||||||||| |||||
Sbjct: 461 agcaaatacaggttgtaactgaattgctgtgtcagagaacatatcttgtggacgacctaa 402
Query: 79 agcactcatggtatcattatgaatgta 105
||||||||| ||||| || ||||||||
Sbjct: 401 agcactcattgtatcgttgtgaatgta 375
>dbj|AB044417.1|AB044417 Chlamydomonas debaryana chloroplast psaA gene for photosystem I
P700 chlorophyll a apoprotein A1, strain:UTEX 1344
Length = 1038
Score = 69.9 bits (35), Expect = 7e-10
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| | |||||| | ||| || |||||||| || ||||||||||| ||||| |||||
Sbjct: 885 agcaaaaacaggttgaagttgaattgcagtatctgagaacatatcttgaggacgacctaa 826
Query: 79 agcactcatggtatcattatgaatgta 105
||||||||| ||||| || ||||||||
Sbjct: 825 agcactcattgtatcgttgtgaatgta 799
>dbj|AB044231.1|AB044231 Pandorina morum chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 854
Length = 1494
Score = 69.9 bits (35), Expect = 7e-10
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctaaagcactcatagtatcgttatgaatgta 799
>dbj|AB044223.1|AB044223 Volvulina steinii chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 1525
Length = 1491
Score = 69.9 bits (35), Expect = 7e-10
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctaaagcactcattgtatcattgtgaatgta 799
>dbj|AB044224.1|AB044224 Volvulina steinii chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 1531
Length = 1491
Score = 69.9 bits (35), Expect = 7e-10
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctaaagcactcattgtatcattgtgaatgta 799
>dbj|AB044187.1|AB044187 Volvox globator chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 955
Length = 1491
Score = 69.9 bits (35), Expect = 7e-10
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||| ||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 857 gtatctgagaacatgtcttgtggacgacctaaagcactcatagtatcattgtgaatgta 799
>dbj|AB044208.1|AB044207S2 Eudorina unicocca chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2, strain:UTEX 1215
Length = 501
Score = 67.9 bits (34), Expect = 3e-09
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||||||||||||| |||||||| || |||
Sbjct: 323 gcagtatctgagaacatatcttgaggacgacctaaagcactcatcgtatcattgtggatg 264
Query: 104 ta 105
||
Sbjct: 263 ta 262
>dbj|AB044205.1|AB044204S2 Eudorina unicocca chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2, strain:UTEX 737
Length = 501
Score = 67.9 bits (34), Expect = 3e-09
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||||||||||||| |||||||| || |||
Sbjct: 323 gcagtatctgagaacatatcttgaggacgacctaaagcactcatcgtatcattgtggatg 264
Query: 104 ta 105
||
Sbjct: 263 ta 262
>dbj|AB044196.1|AB044195S2 Pleodorina indica chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2, strain:UTEX 1990
Length = 501
Score = 67.9 bits (34), Expect = 3e-09
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||||||||||||| |||||||| || |||
Sbjct: 323 gcagtatctgagaacatatcttgaggacgacctaaagcactcatagtatcattgtggatg 264
Query: 104 ta 105
||
Sbjct: 263 ta 262
>dbj|AB044235.1|AB044235 Astrephomene gubernaculifera chloroplast psaA gene for P700
chlorophyll a-protein A1, partial cds, strain:UTEX 1394
Length = 1491
Score = 67.9 bits (34), Expect = 3e-09
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||||| |||
Sbjct: 860 gcagtatcagagaacatatcttgaggacgacctaaagcactcattgtatcgttatggatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>dbj|AB044216.1|AB044216 Yamagishiella unicocca chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:Nozaki E-5
Length = 1491
Score = 67.9 bits (34), Expect = 3e-09
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||||||||||||| ||||| || ||||||
Sbjct: 860 gcagtatctgagaacatatcttgaggacgacctaaagcactcatagtatcgttgtgaatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>dbj|AB044213.1|AB044213 Yamagishiella unicocca chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 2428
Length = 1491
Score = 67.9 bits (34), Expect = 3e-09
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||| ||||||||| |||||||| ||||||
Sbjct: 860 gcagtatctgagaacatatcttgaggacgacctagagcactcatagtatcattgtgaatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>dbj|AB044210.1|AB044210 Eudorina cylindrica chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 1197
Length = 1491
Score = 67.9 bits (34), Expect = 3e-09
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||||||||||||| |||||||| || |||
Sbjct: 860 gcagtatctgagaacatatcttgaggacgacctaaagcactcatagtatcattgtggatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>dbj|AB044199.1|AB044199 Eudorina elegans chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:NIES-456
Length = 1491
Score = 67.9 bits (34), Expect = 3e-09
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||| ||||| ||||| |||||||||||||| |||||||| ||||||
Sbjct: 860 gcagtatctgagaacatgtcttgaggacgacctaaagcactcatagtatcattgtgaatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>gb|AF180019.1|AF180019 Equisetum palustre
Length = 2159
Score = 65.9 bits (33), Expect = 1e-08
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| || ||||||||||| ||||| || || |||||||||||||| || || || |
Sbjct: 1415 agcaaaaatgggttgtaattggatggctgtgtcggaaaacatatcttggggtcgtcccag 1356
Query: 79 agcactcatggtatcattatg 99
|||||||||||| ||||||||
Sbjct: 1355 agcactcatggtgtcattatg 1335
>dbj|AB044198.1|AB044198 Eudorina illinoisensis chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:NIES-460
Length = 1491
Score = 65.9 bits (33), Expect = 1e-08
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcatt 96
|||||||| || ||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 860 gcagtatctgagaacatatcttgaggacgacctaaagcactcatagtatcatt 808
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
Length = 135599
Score = 65.9 bits (33), Expect = 1e-08
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| | |||||||||||| || || | ||| || ||||||||||||||||| |||||
Sbjct: 18156 agcaaatacaggttgtaattgaattgctgcatcagagaacatatcttgtggacgacctaa 18097
Query: 79 agcactcatggtatcattatg 99
|||| ||| |||||||||||
Sbjct: 18096 tgcacgcatagtatcattatg 18076
>dbj|AB044182.1|AB044182 Volvox aureus chloroplast psaA gene for P700 chlorophyll a-protein
A1, partial cds, strain:NIES-541
Length = 1491
Score = 63.9 bits (32), Expect = 4e-08
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 38 tgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcatta 97
||||| |||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 866 tgtattgcagtatctgagaacatatcttgaggacgacctaatgcactcatagtatcattg 807
Query: 98 tgaatgta 105
|| |||||
Sbjct: 806 tgtatgta 799
>gb|AF180022.1|AF180022 Adiantum capillus-veneris
Length = 2159
Score = 61.9 bits (31), Expect = 2e-07
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 20 gcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaa 79
|||||||| ||||| | ||| || || |||||||||||||||||||| ||||| || ||
Sbjct: 1410 gcaaagattggttgcagttgaatagcggtatccgaaaacatatcttgaggacgccccaag 1351
Query: 80 gcactcatggtatcattatgaat 102
|||||||| ||||| || |||||
Sbjct: 1350 gcactcatagtatcgttgtgaat 1328
>dbj|AB044211.1|AB044211S1 Platydorina caudata chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 1, strain:UTEX 1658
Length = 1230
Score = 61.9 bits (31), Expect = 2e-07
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctaaagcactcatagtatcgttatggatgta 799
>dbj|AB044203.1|AB044202S2 Eudorina elegans chloroplast psaA gene for P700 chlorophyll
a-protein A, exon 2 and partial cds, strain:UTEX 1212
Length = 954
Score = 61.9 bits (31), Expect = 2e-07
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaat 102
|||||||| || ||||||||||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 323 gcagtatctgagaacatatcttgaggacgacctaaagcactcatagtatcgttgtgaat 265
>dbj|AB044421.1|AB044421 Lobomonas monstruosa chloroplast psaA gene for photosystem I P700
chlorophyll a apoprotein A1, strain:NIES-474
Length = 1491
Score = 61.9 bits (31), Expect = 2e-07
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| | |||||||||||| || || ||||| || ||||| ||||||||||| || |
Sbjct: 885 agcaaatacaggttgtaattgaatagctgtatctgagaacatgtcttgtggacgaccaag 826
Query: 79 agcactcatggtatcattatgaatgta 105
||||||||| ||||| ||||| |||||
Sbjct: 825 agcactcattgtatcgttatggatgta 799
>dbj|AB044228.1|AB044228 Pandorina morum chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 1727
Length = 1491
Score = 61.9 bits (31), Expect = 2e-07
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 857 gtatctgagaacatatcttgaggacgtcctaaagcactcattgtatcgttgtgaatgta 799
>dbj|AB044227.1|AB044227 Pandorina morum chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 2326
Length = 1491
Score = 61.9 bits (31), Expect = 2e-07
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctaaagcactcatagtatcgttgtgaatgta 799
>dbj|AB044225.1|AB044225 Volvulina boldii chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 2185
Length = 1491
Score = 61.9 bits (31), Expect = 2e-07
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctaaagcactcattgtatcgttgtgaatgta 799
>dbj|AB044183.1|AB044183 Volvox dissipatrix chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 2184
Length = 1491
Score = 61.9 bits (31), Expect = 2e-07
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctaaagcactcattgtatcattgtggatgta 799
>dbj|AB044237.1|AB044236S2 Astrephomene perforata chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2, strain:NIES-564
Length = 953
Score = 60.0 bits (30), Expect = 7e-07
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| || | ||||||||| |||||||| ||||||
Sbjct: 583 gcagtatctgagaacatatcttgaggacgaccaagagcactcatagtatcattgtgaatg 524
Query: 104 ta 105
||
Sbjct: 523 ta 522
>dbj|AB044230.1|AB044229S2 Pandorina morum chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2 and partial cds, strain:UTEX 880
Length = 954
Score = 60.0 bits (30), Expect = 7e-07
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 56 aacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||||||||| ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 311 aacatatcttgaggacgacctaaagcactcattgtatcgttgtgaatgta 262
>dbj|AB044215.1|AB044214S2 Yamagishiella unicocca chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2 and partial cds, strain:UTEX 2430
Length = 954
Score = 60.0 bits (30), Expect = 7e-07
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||| ||||| |||| ||||||||| ||||| || ||||||
Sbjct: 323 gcagtatctgagaacatatcttgaggacgacctagagcactcatagtatcgttgtgaatg 264
Query: 104 ta 105
||
Sbjct: 263 ta 262
>dbj|AB044420.1|AB044420 Vitreochlamys ordinata chloroplast psaA gene for photosystem I P700
chlorophyll a apoprotein A1, strain:Nozaki S-4
Length = 1491
Score = 60.0 bits (30), Expect = 7e-07
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatg 103
|||||||| || ||||||||||||||||| || | ||||||||| ||||| || ||||||
Sbjct: 860 gcagtatctgagaacatatcttgtggacgaccaagagcactcatagtatcgttgtgaatg 801
Query: 104 ta 105
||
Sbjct: 800 ta 799
>dbj|AB044191.1|AB044190S2 Pleodorina californica chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2, strain:UTEX 809
Length = 306
Score = 58.0 bits (29), Expect = 3e-06
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 61 atcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
|||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 306 atcttgaggacgacctaaagcactcatagtatcattgtgaatgta 262
>emb|X64102.1|SCR1733 S.cereale DNA for dispersed repeat sequence (R173-3)
Length = 4659
Score = 58.0 bits (29), Expect = 3e-06
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 105 aagcttagatgcttgagtctccttgaatatttc 137
||||||||| |||||||||||||||||||||||
Sbjct: 948 aagcttagacgcttgagtctccttgaatatttc 916
>emb|X64101.1|SCR1732 S.cereale DNA for dispersed repeat sequence (R173-2)
Length = 4247
Score = 58.0 bits (29), Expect = 3e-06
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 105 aagcttagatgcttgagtctccttgaatatttc 137
||||||||| |||||||||||||||||||||||
Sbjct: 581 aagcttagacgcttgagtctccttgaatatttc 549
>gb|AF041468.1| Guillardia theta
Length = 121524
Score = 56.0 bits (28), Expect = 1e-05
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 34 taattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatc 93
|||||||||||| ||||| || ||||| ||||| | | ||||||||||| ||| |||||
Sbjct: 94501 taattgtatggctgtatctgagaacatgtcttgcgttctgcctaaagcacgcattgtatc 94560
Query: 94 attatgaatgta 105
|||||| |||||
Sbjct: 94561 attatgtatgta 94572
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1
Length = 164921
Score = 54.0 bits (27), Expect = 4e-05
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaa 78
|||||| ||||| ||||| || || || ||||| || ||||| ||||| | ||| |||||
Sbjct: 162352 agcaaaaataggctgtaactgaatagctgtatcagagaacatgtcttgcgaacgtcctaa 162411
Query: 79 agcactcatggtatcattatgaatgta 105
|| ||||| |||||||||||||||||
Sbjct: 162412 ggctctcatagtatcattatgaatgta 162438
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome
Length = 119704
Score = 54.0 bits (27), Expect = 4e-05
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 20 gcaaagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaa 79
||||| || ||||||||||| || || |||| || ||||||||||||||||| |||||
Sbjct: 118159 gcaaaaattggttgtaattgaatagctttatctgagaacatatcttgtggacgacctaat 118218
Query: 80 gcactcatggtatcattatgaat 102
|| | ||| ||||| ||||||||
Sbjct: 118219 gctcgcatagtatcgttatgaat 118241
>dbj|AB044222.1|AB044221S2 Volvulina steinii chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2 and partial cds, strain:NIES-545
Length = 954
Score = 54.0 bits (27), Expect = 4e-05
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 320 gtatctgagaacatatcttgaggacgaccaagagcactcatagtatcattgtgaatgta 262
>dbj|AB044242.1|AB044242 Gonium pectorale chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:NIES-569
Length = 1491
Score = 54.0 bits (27), Expect = 4e-05
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 857 gtatctgagaacatatcttgaggacgaccaagagcactcatagtatcattgtgaatgta 799
>dbj|AB044419.1|AB044419 Chlamydomonas reinhardtii chloroplast psaA gene for photosystem I
P700 chlorophyll a apoprotein A1, strain:137C
Length = 1491
Score = 52.0 bits (26), Expect = 2e-04
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatc 93
|||||||| || ||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 860 gcagtatctgagaacatgtcttgaggacgacctaaagcactcattgtatc 811
>dbj|AB044226.1|AB044226 Pandorina morum chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:NIES-574
Length = 1491
Score = 52.0 bits (26), Expect = 2e-04
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 56 aacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||||||||| ||||| |||||||| ||||| ||||| || ||||||||
Sbjct: 848 aacatatcttgaggacgacctaaagcgctcatagtatcgttgtgaatgta 799
>emb|X05847.1|CHCRPS13 C.reinhardtii chloroplast ps1A1 gene exon 3
Length = 3187
Score = 52.0 bits (26), Expect = 2e-04
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 44 gcagtatccgaaaacatatcttgtggacggcctaaagcactcatggtatc 93
|||||||| || ||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 2048 gcagtatctgagaacatgtcttgaggacgacctaaagcactcattgtatc 1999
>dbj|AB044218.1|AB044217S2 Volvulina compacta chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 2, strain:NIES-582
Length = 501
Score = 50.1 bits (25), Expect = 6e-04
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 29 ggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcatg 88
||||||||||| || || ||||| || ||||||||||| ||||| || | |||||||||
Sbjct: 338 ggttgtaattgaattgctgtatctgagaacatatcttgaggacgaccaagagcactcatt 279
Query: 89 gtatc 93
|||||
Sbjct: 278 gtatc 274
>dbj|AB013101.1|AB013101 Lycopersicon esculentum LE-ACO4 mRNA for
1-aminocyclopropane-1-carboxylate oxidase, complete cds
Length = 1272
Score = 48.1 bits (24), Expect = 0.003
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtagcaaa 24
||||||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtagcaaa 28
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
Length = 191028
Score = 48.1 bits (24), Expect = 0.003
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 19 agcaaagataggttgtaattgtatggcagtatccgaaaacatatcttg 66
||||||||| ||||||||||| || || ||||| || |||||||||||
Sbjct: 87420 agcaaagattggttgtaattggattgctgtatctgagaacatatcttg 87373
>emb|AJ009799.1|GGA9799 Gallus gallus mRNA for ABC transporter protein
Length = 4018
Score = 48.1 bits (24), Expect = 0.003
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtagcaaa 24
||||||||||||||||||||||||
Sbjct: 32 gcggccgcccgggcaggtagcaaa 55
>dbj|AP000397.1|AP000396S2 Beta vulgaris mitochondrial genomic DNA, complete sequence, section 2/2
Length = 169799
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 23 aagataggttgtaattgtatggcagtatccgaaaacatatcttg 66
|||| ||||||||||||||| || || || ||||||||||||||
Sbjct: 35090 aagacaggttgtaattgtatagcggtctctgaaaacatatcttg 35047
>dbj|AB008450.1|AB008450 Beta vulgaris mitochondrial rps7 gene for ribosomal protein S7,
complete cds
Length = 4289
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 23 aagataggttgtaattgtatggcagtatccgaaaacatatcttg 66
|||| ||||||||||||||| || || || ||||||||||||||
Sbjct: 3501 aagacaggttgtaattgtatagcggtctctgaaaacatatcttg 3458
>gb|AF166114.1|AF166114 Mesostigma viride
Length = 118360
Score = 46.1 bits (23), Expect = 0.010
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 28 aggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagcactcat 87
|||||||||||| || || ||||| || ||||| ||||| ||||| |||| |||| |||
Sbjct: 48274 aggttgtaattgaattgctgtatcagagaacatgtcttgaggacgtcctagagcagacat 48215
Query: 88 ggtatcattatgaat 102
||||| ||||||||
Sbjct: 48214 agtatcgttatgaat 48200
>dbj|AB044239.1|AB044239S1 Gonium multicoccum chloroplast psaA gene for P700 chlorophyll
a-protein A1, exon 1, strain:UTEX 2580
Length = 1038
Score = 46.1 bits (23), Expect = 0.010
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| || | ||||||||| |||||||| || |||||
Sbjct: 857 gtatctgagaacatatcttgaggacgaccaagagcactcatagtatcattgtggatgta 799
>dbj|AB044415.1|AB044415 Tetrabaena socialis chloroplast psaA gene for photosystem I P700
chlorophyll a apoprotein A1, strain:NIES-571
Length = 1491
Score = 46.1 bits (23), Expect = 0.010
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatc 93
||||| || ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctagagcactcatcgtatc 811
>dbj|AB044241.1|AB044241 Gonium octonarium chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:GO-LC-1+
Length = 1491
Score = 46.1 bits (23), Expect = 0.010
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || ||||||||||| ||||| || | ||||||||| ||||| ||||| |||||
Sbjct: 857 gtatctgagaacatatcttgaggacgaccaagagcactcatagtatcgttatggatgta 799
>dbj|AB044232.1|AB044232 Pandorina colemaniae chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:NIES-572
Length = 1491
Score = 46.1 bits (23), Expect = 0.010
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcattatgaatgta 105
||||| || |||||||||||||| || ||||| || ||||| ||||| || ||||||||
Sbjct: 857 gtatctgagaacatatcttgtggtcgtcctaacgcgctcattgtatcgttgtgaatgta 799
>dbj|AB044416.1|AB044416 Basichlamys sacculifera chloroplast psaA gene for photosystem I
P700 chlorophyll a apoprotein A1, strain:NIES-566
Length = 1491
Score = 46.1 bits (23), Expect = 0.010
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatc 93
||||| || ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 857 gtatctgagaacatatcttgaggacgacctagagcactcatagtatc 811
>gb|M18165.1|SYOPSAAB Cyanobacterium sp. (PCC 7002) P700 chlorophyll a apoprotein (psaA and
psaB) genes, complete cds
Length = 5697
Score = 46.1 bits (23), Expect = 0.010
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 23 aagataggttgtaattgtatggcagtatccgaaaacatatcttgtggacggcctaaagca 82
|||||||| || || || || |||| ||| || ||||||||||| ||||| || || |||
Sbjct: 1653 aagataggctgcaactgaatcgcagaatcagagaacatatcttggggacgacccaacgca 1594
Query: 83 ctcatggtatcattatgaatgta 105
| |||||| ||||| ||||||||
Sbjct: 1593 cgcatggtgtcattgtgaatgta 1571
>dbj|AB044244.1|AB044244 Gonium viridistellatum chloroplast psaA gene for P700 chlorophyll
a-protein A1, partial cds, strain:UTEX 2519
Length = 1491
Score = 44.1 bits (22), Expect = 0.040
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 47 gtatccgaaaacatatcttgtggacggcctaaagcactcatggtatcatt 96
||||| || ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 857 gtatctgagaacatatcttgaggacgaccaagagcactcatagtatcatt 808
>emb|AJ315149.1|OMY315149 Oncorhynchus mykiss mRNA for CC chemokine
Length = 548
Score = 42.1 bits (21), Expect = 0.16
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtagc 21
|||||||||||||||||||||
Sbjct: 4 gcggccgcccgggcaggtagc 24
Score = 38.2 bits (19), Expect = 2.4
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 138 acctcggccgcgaccacgc 156
|||||||||||||||||||
Sbjct: 529 acctcggccgcgaccacgc 547
>dbj|AB019562.1|AB019562 Homo sapiens mRNA expressed only in placental villi, clone SMAP41
Length = 103
Score = 42.1 bits (21), Expect = 0.16
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 136 tcacctcggccgcgaccacgc 156
|||||||||||||||||||||
Sbjct: 82 tcacctcggccgcgaccacgc 102
Score = 38.2 bits (19), Expect = 2.4
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggta 19
|||||||||||||||||||
Sbjct: 5 gcggccgccc