The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTN 2.2.3 [Apr-24-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Fgr-S3_1_E14_T7.seq Fgr-S3_1_E14_T7 LENGTH:286bp ;
DIRECTION:5 ; CLONE:Fgr-S3_1_E14 ; CLONELIB: n/a
(286 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
1,217,082 sequences; 1,205,879,881 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF326781.1|AF326781 Triticum monococcum actin (ACT-1) ge... 74 9e-11
gb|AF033850.1|AF033850 Homo sapiens 48 0.005
emb|AJ310908.1|FVE310908 Fucus vesiculosus mRNA for ALA deh... 48 0.005
gb|AF093139.1|AF093139 Rattus norvegicus strain Sprague Dawley 48 0.005
dbj|AB075227.1|AB075227 Cucumis melo GeAAT mRNA for alcohol... 48 0.005
dbj|AB017520.1|AB017520 Bombyx mori mRNA for Bacteriophage ... 48 0.005
emb|X97991.1|MMCALCIT M.musculus mRNA for calcitonin 48 0.005
dbj|AB040991.1|AB040991 Oryctolagus cuniculus mRNA for pros... 48 0.005
gb|AF097021.1| Homo sapiens 46 0.019
gb|AF022770.2| Mus musculus strain BALB/c 46 0.019
ref|NM_007227.2| Homo sapiens G protein-coupled receptor 45... 46 0.019
gb|AF075584.1|TGFA2 Homo sapiens transforming growth factor... 46 0.019
gb|AF039086.1|AF039086 Pseudomicrothorax dubius articulin 1... 46 0.019
gb|AF050198.1|AF050198 Homo sapiens 46 0.019
gb|AF074706.1|AF074706 Bos taurus 46 0.019
emb|AJ318062.1|CNE318062 Cryptococcus neoformans mRNA for A... 46 0.019
gb|AF128458.1|AF128458 Homo sapiens 46 0.019
gb|AF012324.1|AF012324 Mus musculus 46 0.019
emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate ox... 46 0.019
gb|U81599.1|HSU81599 Homo sapiens chromosome 17 map 17q21.2 46 0.019
emb|AJ006225.1|MCR6225 Mesembryanthemum crystallinum mRNA f... 46 0.019
gb|AF067650.1|AF067650 Rattus norvegicus strain Sprague-Dawley 46 0.019
gb|AF039201.1| Pinus caribaea 46 0.019
gb|AF074720.1|AF074720 Dicentrarchus labrax 46 0.019
gb|AF061266.1|AF061266 Rattus norvegicus strain Sprague-Dawley 46 0.019
gb|U77330.1|MMU77330 Mus musculus extracellular matrix prot... 46 0.019
emb|AJ252088.1|SDU252088 Solanum dulcamara mRNA for gibbere... 46 0.019
gb|AF037989.1|AF037989 Homo sapiens STAT-induced STAT inhib... 46 0.019
gb|AF079314.1|AF079314 Rattus norvegicus strain Wistar 46 0.019
gb|AF000670.1|AF000670 Homo sapiens chromosome X map Xq26 46 0.019
gb|AF042353.1|AF042353 Xenopus laevis 46 0.019
gb|U92642.1|HSU92642 Homo sapiens 46 0.019
emb|Y08890.1|HSRANBP5 Homo spaiens mRNA for Ran_GTP binding... 46 0.019
gb|AF024536.1|AF024536 Danio rerio 46 0.019
gb|AF024535.1|AF024535 Danio rerio 46 0.019
emb|AJ293759.1|ABI293759 Agaricus bisporus mRNA for putativ... 46 0.019
emb|AJ010750.1|RNO010750 Rattus norvegicus mRNA for Castrat... 46 0.019
emb|AJ278170.1|MMU278170 Mus musculus mRNA for neuronal int... 46 0.019
emb|Y17775.1|HSY17775 Homo sapiens CACT gene, exon 1 and jo... 46 0.019
emb|AJ245736.1|DPU245736 Daphnia pulex mRNA for aconitase 46 0.019
gb|U81826.1|RNU81826 Rattus norvegicus clone PG23 mRNA sequ... 46 0.019
emb|AJ238855.1|RNO238855 Rattus norvegicus mRNA for type A/... 46 0.019
emb|AJ238854.1|RNO238854 Rattus norvegicus mRNA for type A/... 46 0.019
emb|AJ001443.1|HSAJ1443 Homo sapiens mRNA for SAP 130 splic... 46 0.019
gb|U83599.1|HSU83599 Human alternatively spliced death doma... 46 0.019
dbj|AB051294.1|AB051294 Oryza sativa OsNIF1 mRNA for bZIP t... 46 0.019
dbj|AB057371.1|AB057371 Daucus carota CSCP mRNA for cystein... 46 0.019
emb|AJ004937.1|PSAJ4937 Phascolion strombi mRNA for cytopla... 46 0.019
gb|U62316.1|RNU62316 Rattus norvegicus strain Wistar 46 0.019
emb|AJ223716.1|SAC223716 Squalus acanthias mRNA for sgk-2 s... 46 0.019
emb|AJ001517.1|RNHERHAEM Rattus norvegicus mRNA for heredit... 46 0.019
dbj|AB040807.1|AB040807 Rattus norvegicus MLS2s mRNA for me... 46 0.019
emb|Y10319.1|HSCARNCAR H.sapiens mRNA for carnitine carrier 46 0.019
dbj|AB032612.1|AB032612 Pinctada maxima mRNA for N14 matrix... 46 0.019
dbj|AB009308.2|AB009308 Hordeum vulgare mRNA for bpw2, comp... 46 0.019
dbj|AB019574.1|AB019574 Homo sapiens mRNA expressed only in... 46 0.019
dbj|AB000814.1|AB000814 Homo sapiens mRNA for BMAL1f, parti... 46 0.019
ref|NM_139017.1| Homo sapiens similar to CRL3 protein (CRL3... 44 0.077
ref|NM_130806.2| Homo sapiens similar to G protein coupled ... 44 0.077
gb|AF403384.2| Homo sapiens chromosome 11 map 11q13 44 0.077
gb|AF075583.1|TGFA1 Homo sapiens transforming growth factor... 44 0.077
gb|AF106913.1|AF106913 Homo sapiens CRL3 protein (CRL3) mRN... 44 0.077
gb|AF107491.1|AF107491 Hexamita sp. 44 0.077
gb|AF139835.1|AF139835 Populus tremula x Populus tremuloides 44 0.077
emb|AJ130894.1|HSA130894 Homo sapiens mRNA for transcriptio... 44 0.077
emb|AJ306902.1|RCO306902 Ricinus communis mRNA for iron tra... 44 0.077
gb|AF072534.1|AF072534 Capsicum annuum 44 0.077
emb|AJ133126.1|RNO33126 Rattus norvegicus mRNA for kelch-li... 44 0.077
gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides 44 0.077
emb|AJ416426.1|MMU416426 Mus musculus mRNA for damaged-DNA ... 44 0.077
gb|AF117260.1|AF117260 Ceratopteris richardii ribosomal pro... 44 0.077
gb|AF026274.1|AF026274 Mus musculus 44 0.077
gb|L77146.1|ZEFHSC7R Danio rerio heat shock cognate (hsc70)... 44 0.077
gb|AF169248.2|AF169248 Opsanus beta 44 0.077
gb|AF002248.2|AF002248 Pisum sativum 44 0.077
emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integri... 44 0.077
gb|AF106660.1|AF106660 Lycopersicon esculentum 44 0.077
emb|AJ290944.2|MMU290944 Mus musculus mRNA for a stretch re... 44 0.077
gb|AF127772.1|AF127772 Homo sapiens cell-line E8CASS clone ... 44 0.077
gb|AF133731.2|AF133731 Rattus norvegicus strain Copenhagen 44 0.077
gb|AF112153.1|AF112153 Rattus norvegicus 44 0.077
emb|AJ279852.1|MMU279852 Mus musculus partial mRNA for hypo... 44 0.077
emb|AJ279850.1|MMU279850 Mus musculus partial mRNA for hypo... 44 0.077
emb|AJ279849.1|MMU279849 Mus musculus partial mRNA for hypo... 44 0.077
emb|AJ279847.1|MMU279847 Mus musculus partial mRNA for hypo... 44 0.077
emb|AJ279846.1|MMU279846 Mus musculus partial mRNA for hypo... 44 0.077
emb|AJ279839.1|MMU279839 Mus musculus partial mRNA for hypo... 44 0.077
gb|AF125392.1|AF125392 Homo sapiens 44 0.077
gb|AF118559.1|AF118559 Avena fatua strain AN265 44 0.077
gb|AF098517.1|AF098517 Penicillium citrinum strain 52-5 44 0.077
gb|AF095771.1|AF095771 Homo sapiens 44 0.077
gb|AF061027.1|AF061027 Vernicia fordii 44 0.077
gb|U58918.1|ATU58918 Arabidopsis thaliana MEK kinase (MAP3K... 44 0.077
gb|U55215.1|CPU55215 Cavia porcellus interleukin-5 receptor... 44 0.077
gb|AF053405.1|AF053405 Mus musculus 44 0.077
emb|AJ300524.2|PEU300524 Populus euramericana mRNA for puta... 44 0.077
emb|AJ272202.1|ATH272202 Arabidopsis thaliana mRNA for mito... 44 0.077
gb|AF061514.1|AF061514 Gossypium hirsutum 44 0.077
emb|AJ293762.1|ABI293762 Snythetic construct chimeric mRNA ... 44 0.077
gb|AF093414.1|AF093414 Saguinus oedipus 44 0.077
gb|AF064741.1|AF064741 Sus scrofa 44 0.077
gb|AF084928.1|AF084928 Homo sapiens erythroblast macrophage... 44 0.077
gb|U29343.1|HSU29343 Homo sapiens hyaluronan receptor (RHAM... 44 0.077
gb|AF005654.1|AF005654 Homo sapiens 44 0.077
gb|AF038664.1|AF038664 Homo sapiens chromosome 18 map 18q11 44 0.077
gb|AF051151.1|AF051151 Homo sapiens chromosome 1 map 1q41-q42 44 0.077
emb|AJ293849.1|KPN293849 Klebsiella pneumoniae contig regio... 44 0.077
emb|AJ293848.1|KPN293848 Klebsiella pneumoniae contig regio... 44 0.077
emb|AJ293846.1|KPN293846 Klebsiella pneumoniae transposon T... 44 0.077
emb|AJ276857.1|KPN276857 Klebsiella pneumoniae partial SL04... 44 0.077
emb|AJ276855.1|KPN276855 Klebsiella pneumoniae partial SL03... 44 0.077
emb|AJ276849.1|KPN276849 Klebsiella pneumoniae partial SL01... 44 0.077
emb|AJ276466.1|KPN276466 Klebsiella pneumoniae contig regio... 44 0.077
gb|AF072439.1|AF072439 Rattus norvegicus strain Sprague-Dawley 44 0.077
dbj|AB013101.1|AB013101 Lycopersicon esculentum LE-ACO4 mRN... 44 0.077
gb|AF057025.1|AF057025 Rattus norvegicus strain Sprague-Dawley 44 0.077
gb|AF045229.1|AF045229 Homo sapiens 44 0.077
gb|AF035119.1|AF035119 Homo sapiens chromosome 8 map 8p21-p22 44 0.077
emb|AJ293797.1|ATH293797 Arabidopsis thaliana mRNA for SC35... 44 0.077
emb|AJ293760.1|ABI293760 Agaricus bisporus mRNA for putativ... 44 0.077
emb|AJ251833.1|HSA251833 Homo sapiens mRNA for hypothetical... 44 0.077
emb|Y11883.1|TPRAB3CLP T.pseudospiralis mRNA for rab3C-like... 44 0.077
emb|Y11888.1|TBRAB5AP T.britovi mRNA for rab5A-like protein... 44 0.077
gb|AF015768.1|AF015768 Mus musculus 44 0.077
emb|AJ251660.1|GTI251660 Girardia tigrina mRNA for homeodom... 44 0.077
gb|U80457.1|HSU80457 Human transcription factor SIM2 short ... 44 0.077
gb|U80456.1|HSU80456 Human transcription factor SIM2 long f... 44 0.077
dbj|AB072429.1| Apis mellifera mRNA for IP3phosphatase, com... 44 0.077
emb|AJ010090.1|ATH010090 Arabidopsis thaliana mRNA for MAP3... 44 0.077
dbj|AB060695.1| Homo sapiens TLR5 mRNA for Toll-like recept... 44 0.077
gb|S82653.1|S82653 endothelin converting enzyme [guinea pig... 44 0.077
emb|AJ011409.1|HSA011409 Homo sapiens mRNA for hypothetical... 44 0.077
dbj|AB072357.1|AB072357 Homo sapiens mRNA for hSSH-1B, comp... 44 0.077
gb|U66839.1|HSU66839 Human MAP kinase 3b mRNA, complete cds 44 0.077
gb|U61232.1|HSU61232 Human tubulin-folding cofactor E mRNA,... 44 0.077
dbj|AB051296.1|AB051296 Oryza sativa OsNIF3 mRNA for bZIP t... 44 0.077
emb|AJ009799.1|GGA9799 Gallus gallus mRNA for ABC transport... 44 0.077
emb|AJ012375.1|HSA012375 Homo sapiens mRNA for SUI1 protein... 44 0.077
emb|AJ223715.1|SAC223715 Squalus acanthias mRNA for sgk-1 s... 44 0.077
emb|Z93766.1|MDZ93766 M.domestica mRNA; small auxin up-regu... 44 0.077
emb|Z93765.1|MDZ93765 M.domestica mRNA for lignostilbene di... 44 0.077
dbj|AB041734.1|AB041734 Danio rerio orf mRNA, complete cds 44 0.077
dbj|AB047592.1|AB047592 Trichophyton mentagrophytes mRNA fo... 44 0.077
dbj|AB044662.1|AB044662 Prunus persica PP-ACS1 mRNA for 1-a... 44 0.077
emb|Y11312.1|HSC2PI3K H.sapiens mRNA for phosphoinositide 3... 44 0.077
dbj|AB019046.1|AB019046 Mus musculus mRNA for receptor-acti... 44 0.077
emb|Y12236.1|DECZSD D.rerio mRNA for Cu/Zn-superoxide dismu... 44 0.077
dbj|D88425.1|D88425 Cavia cobaya mRNA for serine/threoine k... 44 0.077
dbj|D87747.1|D87747 Mus musculus mRNA for murine CXCR-4, co... 44 0.077
dbj|D78130.1|D78130 Homo sapiens mRNA for squalene epoxidas... 44 0.077
dbj|AB019572.1|AB019572 Homo sapiens mRNA expressed only in... 44 0.077
dbj|AB019570.1|AB019570 Homo sapiens mRNA expressed only in... 44 0.077
dbj|AB019569.1|AB019569 Homo sapiens mRNA expressed only in... 44 0.077
dbj|AB019568.1|AB019568 Homo sapiens mRNA expressed only in... 44 0.077
dbj|AB019566.1|AB019566 Homo sapiens mRNA expressed only in... 44 0.077
dbj|AB019562.1|AB019562 Homo sapiens mRNA expressed only in... 44 0.077
emb|Y10552.1|HSNCL3PRT H.sapiens mRNA for calpain-like prot... 44 0.077
emb|AJ000008.1|HSC2PI3KI Homo sapiens mRNA for C2 domain co... 44 0.077
gb|AF245220.1| Homo sapiens 42 0.30
gb|L77884.1|MUSLYST Mus musculus Lyst (Lyst) mRNA, complete... 42 0.30
emb|AL354982.12|AL354982 Human DNA sequence from clone RP11... 42 0.30
emb|AJ315149.1|OMY315149 Oncorhynchus mykiss mRNA for CC ch... 42 0.30
gb|AF086824.1|AF086824 Mus musculus 42 0.30
gb|AF086823.1|AF086823 Mus musculus 42 0.30
gb|U82540.1|HMU82540 Herdmania momus unknown protein precur... 42 0.30
gb|U63517.1|HMU63517 Herdmania momus serine proteinase (Hms... 42 0.30
dbj|AB051295.1|AB051295 Oryza sativa OsNIF2 mRNA for bZIP t... 42 0.30
emb|AJ001134.1|SRMETPANS Strongyloides ratti mRNA for metal... 42 0.30
dbj|AP001838.4|AP001838 Homo sapiens genomic DNA, chromosom... 42 0.30
dbj|AB019573.1|AB019573 Homo sapiens mRNA expressed only in... 42 0.30
dbj|AB019567.1|AB019567 Homo sapiens mRNA expressed only in... 42 0.30
dbj|AB019563.1|AB019563 Homo sapiens mRNA expressed only in... 42 0.30
gb|AF443403.1| Anaplasma phagocytophila clone RWMSP11 major... 40 1.2
gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24,... 40 1.2
gb|AF042168.1|AF042168 Onchocerca volvulus 40 1.2
gb|AF156489.1|AF156489 Homo sapiens chromosome 7 map 7q11.23 40 1.2
gb|AF007817.1|AF007817 Mus musculus IPL1 and aurora related... 40 1.2
gb|AF158379.1|AF158379 Rattus norvegicus clone 49 strain Wi... 40 1.2
emb|AL513328.12|AL513328 Human DNA sequence from clone RP13... 40 1.2
emb|AL139805.15|AL139805 Human DNA sequence from clone RP3-... 40 1.2
gb|AF020642.1|AF020642 Homo sapiens clone 13010.B17 40 1.2
gb|U26024.1|BTU26024 Bos taurus pigpen mRNA, complete cds 40 1.2
emb|AJ278348.1|HSA278348 Homo sapiens mRNA for pregnancy-as... 40 1.2
gb|AF025848.1|AF025848 Procambarus clarkii 40 1.2
emb|AL138914.9|AL138914 Human DNA sequence from clone RP11-... 40 1.2
emb|AJ250667.1|ACO250667 Ananas comosus mRNA for copper/zin... 40 1.2
gb|AY070404.1| Arabidopsis thaliana unknown protein (At3g58... 38 4.8
gb|AC006437.5| Arabidopsis thaliana chromosome 2 clone T19K... 38 4.8
gb|AC106053.6| Homo sapiens chromosome 2 clone RP11-818B6, ... 38 4.8
ref|NM_115728.1| Arabidopsis thaliana chromosome 3 clone CH... 38 4.8
ref|NM_112192.1| Arabidopsis thaliana chromosome 3 clone CH... 38 4.8
gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, ... 38 4.8
gb|AC006805.1|AC006805 Caenorhabditis elegans cosmid Y54B9A... 38 4.8
gb|AF104263.1|AF104263 Hepatitis D virus strain TW2667 38 4.8
gb|AC007375.6|AC007375 Homo sapiens chromosome 14 clone RP1... 38 4.8
emb|AL356141.9|AL356141 Human DNA sequence from clone RP11-... 38 4.8
emb|AL591363.4|AL591363 Human DNA sequence from clone RP11-... 38 4.8
gb|AF165966.1|AF165966 Hepatitis D virus strain TWD2667 c-7 38 4.8
gb|AF165965.1|AF165965 Hepatitis D virus strain TWD2667 c-6 38 4.8
gb|AF165964.1|AF165964 Hepatitis D virus strain TWD2667 c-5 38 4.8
gb|AF165963.1|AF165963 Hepatitis D virus strain TWD2667 c-4 38 4.8
gb|AF165962.1|AF165962 Hepatitis D virus strain TWD2667 c-3 38 4.8
gb|AF165961.1|AF165961 Hepatitis D virus strain TWD2667 c-2 38 4.8
gb|AF165960.1|AF165960 Hepatitis D virus strain TWD2667 c-1 38 4.8
gb|AF165958.1|AF165958 Hepatitis D virus strain TWD2667 b-10 38 4.8
gb|AF165957.1|AF165957 Hepatitis D virus strain TWD2667 b-9 38 4.8
gb|AF165956.1|AF165956 Hepatitis D virus strain TWD2667 a-3 38 4.8
gb|AF165955.1|AF165955 Hepatitis D virus strain TWD2667 b-8 38 4.8
gb|AF165954.1|AF165954 Hepatitis D virus strain TWD2667 b-7 38 4.8
gb|AF165953.1|AF165953 Hepatitis D virus strain TWD2667 b-6 38 4.8
gb|AF165952.1|AF165952 Hepatitis D virus strain TWD2667 b-5 38 4.8
gb|AF165951.1|AF165951 Hepatitis D virus strain TWD2667 b-4 38 4.8
gb|AF165950.1|AF165950 Hepatitis D virus strain TWD2667 b-3 38 4.8
gb|AF165949.1|AF165949 Hepatitis D virus strain TWD2667 b-2 38 4.8
gb|AF165948.1|AF165948 Hepatitis D virus strain TWD2667 b-1 38 4.8
gb|AF165947.1|AF165947 Hepatitis D virus strain TWD2667 a-8 38 4.8
gb|AF165946.1|AF165946 Hepatitis D virus strain TWD2667 a-7 38 4.8
gb|AF165945.1|AF165945 Hepatitis D virus strain TWD2667 a-6 38 4.8
gb|AF165944.1|AF165944 Hepatitis D virus strain TWD2667 a-5 38 4.8
gb|AF165942.1|AF165942 Hepatitis D virus strain TWD2667 a-3 38 4.8
gb|AF165941.1|AF165941 Hepatitis D virus strain TWD2667 a-2 38 4.8
gb|AF165940.1|AF165940 Hepatitis D virus strain TWD2667 a-1 38 4.8
emb|AL035045.5|HS905G11 Human DNA sequence from clone RP5-9... 38 4.8
gb|AF064867.1|AF064867 Homo sapiens 38 4.8
gb|AF022861.1|AF022861 Mus musculus strain BALB/c 38 4.8
gb|AF022858.1|AF022858 Mus musculus strain BALB/c 38 4.8
gb|AF022857.1|AF022857 Mus musculus strain BALB/c 38 4.8
gb|AF022856.1|AF022856 Mus musculus strain BALB/c 38 4.8
gb|AF022855.1|AF022855 Mus musculus strain BALB/c 38 4.8
gb|AF022854.1|AF022854 Mus musculus strain BALB/c 38 4.8
emb|AL157879.7|AL157879 Human DNA sequence from clone RP11-... 38 4.8
gb|AF019615.1|AF019615 Mus musculus Mym mRNA, 5'UTR 38 4.8
gb|AC005194.1|AC005194 Homo sapiens chromosome 5, BAC clone... 38 4.8
emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome... 38 4.8
gb|AF008419.1|AF008419 Hepatitis D virus I34 hepatitis delt... 38 4.8
gb|AF008399.1|AF008399 Hepatitis D virus I27 hepatitis delt... 38 4.8
gb|AF008381.1|AF008381 Hepatitis D virus I06 hepatitis delt... 38 4.8
gb|AF008380.1|AF008380 Hepatitis D virus I05 hepatitis delt... 38 4.8
gb|AF008379.1|AF008379 Hepatitis D virus I04 hepatitis delt... 38 4.8
gb|AF008377.1|AF008377 Hepatitis D virus I02 hepatitis delt... 38 4.8
gb|AF008357.1|AF008357 Hepatitis D virus United States isol... 38 4.8
gb|AF008349.1|AF008349 Hepatitis D virus Turkish isolate 07... 38 4.8
dbj|AB055890.1|AB055890 Homo sapiens c-lbc mRNA for guanine... 38 4.8
dbj|AB049620.1|AB049620 Halocynthia roretzi AsFCN2 mRNA for... 38 4.8
dbj|AP000603.1|AP000603 Arabidopsis thaliana genomic DNA, c... 38 4.8
emb|Y09616.1|HSICE H.sapiens mRNA for putative carboxyleste... 38 4.8
dbj|AP001719.1|AP001719 Homo sapiens genomic DNA, chromosom... 38 4.8
dbj|AP000167.1|AP000167 Homo sapiens genomic DNA, chromosom... 38 4.8
dbj|AP000052.1|AP000052 Homo sapiens genomic DNA, chromosom... 38 4.8
dbj|AP000318.1|AP000318 Homo sapiens genomic DNA, chromosom... 38 4.8
>gb|AF326781.1|AF326781 Triticum monococcum actin (ACT-1) gene, partial cds; putative
chromosome condensation factor (CCF), putative resistance
protein (RGA-2), putative resistance protein (RGA2) and
putative nodulin-like-like protein (NLL) gene, complete
cds; and retrotransp>
Length = 211009
Score = 73.8 bits (37), Expect = 9e-11
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 23 cggtttacccttgcgtcgctggccattgtcctgcgtgttggtattagccacaaagtc 79
|||||||||||| || |||||||| ||||| || |||||||||||||||||||||||
Sbjct: 94206 cggtttacccttacgccgctggcccttgtcatgtgtgttggtattagccacaaagtc 94262
Score = 61.9 bits (31), Expect = 3e-07
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 208 tgtaatgatatgggaaccctcatggccgctttagtgaagtatgccga 254
|||||||| |||||||| |||||||||||| | ||||||||||||||
Sbjct: 94446 tgtaatgacatgggaactctcatggccgctctggtgaagtatgccga 94400
Score = 40.1 bits (20), Expect = 1.2
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 162 tttcccttccctgcttcatcatcattaggctcgggatccttggt 205
||||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 94346 tttcccttccctgtcttatcatcatcagactcaggatccttggt 94389
>gb|AF033850.1|AF033850 Homo sapiens
Length = 3388
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 263 ggacctgcccgggcggccgctcga 286
||||||||||||||||||||||||
Sbjct: 51 ggacctgcccgggcggccgctcga 28
>emb|AJ310908.1|FVE310908 Fucus vesiculosus mRNA for ALA dehydratase (hemB gene)
Length = 1530
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 263 ggacctgcccgggcggccgctcga 286
||||||||||||||||||||||||
Sbjct: 58 ggacctgcccgggcggccgctcga 35
>gb|AF093139.1|AF093139 Rattus norvegicus strain Sprague Dawley
Length = 2304
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 263 ggacctgcccgggcggccgctcga 286
||||||||||||||||||||||||
Sbjct: 54 ggacctgcccgggcggccgctcga 31
>dbj|AB075227.1|AB075227 Cucumis melo GeAAT mRNA for alcohol acetyltransferase, complete cds
Length = 1567
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 262 aggacctgcccgggcggccgctcg 285
||||||||||||||||||||||||
Sbjct: 24 aggacctgcccgggcggccgctcg 1
>dbj|AB017520.1|AB017520 Bombyx mori mRNA for Bacteriophage T7 lysozyme-like protein 2
(BTL-LP2), complete cds
Length = 622
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 263 ggacctgcccgggcggccgctcga 286
||||||||||||||||||||||||
Sbjct: 565 ggacctgcccgggcggccgctcga 542
>emb|X97991.1|MMCALCIT M.musculus mRNA for calcitonin
Length = 850
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 263 ggacctgcccgggcggccgctcga 286
||||||||||||||||||||||||
Sbjct: 24 ggacctgcccgggcggccgctcga 1
>dbj|AB040991.1|AB040991 Oryctolagus cuniculus mRNA for prostaglandin D synthase, complete
cds
Length = 767
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 263 ggacctgcccgggcggccgctcga 286
||||||||||||||||||||||||
Sbjct: 38 ggacctgcccgggcggccgctcga 15
>gb|AF097021.1| Homo sapiens
Length = 2861
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>gb|AF022770.2| Mus musculus strain BALB/c
Length = 1543
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 51 gacctgcccgggcggccgctcga 29
>ref|NM_007227.2| Homo sapiens G protein-coupled receptor 45 (GPR45), mRNA
Length = 1777
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 41 gacctgcccgggcggccgctcga 19
>gb|AF075584.1|TGFA2 Homo sapiens transforming growth factor alpha precursor (TGFA)
gene, exon 2 and partial cds
Length = 758
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 34 gacctgcccgggcggccgctcga 12
>gb|AF039086.1|AF039086 Pseudomicrothorax dubius articulin 1 mRNA, complete cds
Length = 2084
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>gb|AF050198.1|AF050198 Homo sapiens
Length = 1374
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 50 gacctgcccgggcggccgctcga 28
>gb|AF074706.1|AF074706 Bos taurus
Length = 1878
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 37 gacctgcccgggcggccgctcga 15
>emb|AJ318062.1|CNE318062 Cryptococcus neoformans mRNA for ABC-transporter (eCDR1 gene)
Length = 4951
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>gb|AF128458.1|AF128458 Homo sapiens
Length = 6878
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 37 gacctgcccgggcggccgctcga 15
>gb|AF012324.1|AF012324 Mus musculus
Length = 1123
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 42 gacctgcccgggcggccgctcga 20
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene)
Length = 934
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>gb|U81599.1|HSU81599 Homo sapiens chromosome 17 map 17q21.2
Length = 1316
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 47 gacctgcccgggcggccgctcga 25
>emb|AJ006225.1|MCR6225 Mesembryanthemum crystallinum mRNA for small GTP-binding protein
Length = 1028
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>gb|AF067650.1|AF067650 Rattus norvegicus strain Sprague-Dawley
Length = 3106
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 36 gacctgcccgggcggccgctcga 14
>gb|AF039201.1| Pinus caribaea
Length = 926
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 45 gacctgcccgggcggccgctcga 23
>gb|AF074720.1|AF074720 Dicentrarchus labrax
Length = 430
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>gb|AF061266.1|AF061266 Rattus norvegicus strain Sprague-Dawley
Length = 4069
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 55 gacctgcccgggcggccgctcga 33
>gb|U77330.1|MMU77330 Mus musculus extracellular matrix protein precursor SC1 mRNA,
complete cds
Length = 2797
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 50 gacctgcccgggcggccgctcga 28
>emb|AJ252088.1|SDU252088 Solanum dulcamara mRNA for gibberellin 20-oxidase (ga20ox1 gene)
Length = 1539
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 37 gacctgcccgggcggccgctcga 15
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 1505 acctgcccgggcggccgctcga 1526
>gb|AF037989.1|AF037989 Homo sapiens STAT-induced STAT inhibitor-2 mRNA, complete cds
Length = 1947
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 42 gacctgcccgggcggccgctcga 20
>gb|AF079314.1|AF079314 Rattus norvegicus strain Wistar
Length = 254
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 37 gacctgcccgggcggccgctcga 15
>gb|AF000670.1|AF000670 Homo sapiens chromosome X map Xq26
Length = 4007
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 3929 gacctgcccgggcggccgctcga 3951
>gb|AF042353.1|AF042353 Xenopus laevis
Length = 3147
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 27 gacctgcccgggcggccgctcga 5
>gb|U92642.1|HSU92642 Homo sapiens
Length = 1777
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 41 gacctgcccgggcggccgctcga 19
>emb|Y08890.1|HSRANBP5 Homo spaiens mRNA for Ran_GTP binding protein 5 (RanBP5(Importin5)
gene)
Length = 4826
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 37 gacctgcccgggcggccgctcga 15
>gb|AF024536.1|AF024536 Danio rerio
Length = 938
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 33 gacctgcccgggcggccgctcga 11
>gb|AF024535.1|AF024535 Danio rerio
Length = 1098
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 35 gacctgcccgggcggccgctcga 13
>emb|AJ293759.1|ABI293759 Agaricus bisporus mRNA for putative chloroperoxidase (cpo gene),
strain D649
Length = 1091
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 24 gacctgcccgggcggccgctcga 2
>emb|AJ010750.1|RNO010750 Rattus norvegicus mRNA for Castration Induced Prostatic Apoptosis
Related protein-1 (CIPAR-1)
Length = 1200
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>emb|AJ278170.1|MMU278170 Mus musculus mRNA for neuronal interacting factor X 1 (NIX1) (Nix1
gene)
Length = 1235
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 24 gacctgcccgggcggccgctcga 2
>emb|Y17775.1|HSY17775 Homo sapiens CACT gene, exon 1 and joined CDS
Length = 234
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 27 gacctgcccgggcggccgctcga 5
>emb|AJ245736.1|DPU245736 Daphnia pulex mRNA for aconitase
Length = 2558
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>gb|U81826.1|RNU81826 Rattus norvegicus clone PG23 mRNA sequence
Length = 1411
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 51 gacctgcccgggcggccgctcga 29
>emb|AJ238855.1|RNO238855 Rattus norvegicus mRNA for type A/B hnRNP protein p38
Length = 1329
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 89 gacctgcccgggcggccgctcga 67
>emb|AJ238854.1|RNO238854 Rattus norvegicus mRNA for type A/B hnRNP protein p40
Length = 1470
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 89 gacctgcccgggcggccgctcga 67
>emb|AJ001443.1|HSAJ1443 Homo sapiens mRNA for SAP 130 spliceosomal protein
Length = 4595
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 82 gacctgcccgggcggccgctcga 60
>gb|U83599.1|HSU83599 Human alternatively spliced death domain receptor 3 (DDR3) gene,
partial cds
Length = 651
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 43 gacctgcccgggcggccgctcga 21
>dbj|AB051294.1|AB051294 Oryza sativa OsNIF1 mRNA for bZIP transcription factor, complete
cds
Length = 1654
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>dbj|AB057371.1|AB057371 Daucus carota CSCP mRNA for cysteine proteinase, partial cds
Length = 660
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 614 gacctgcccgggcggccgctcga 636
>emb|AJ004937.1|PSAJ4937 Phascolion strombi mRNA for cytoplasmic intermediate filament
protein
Length = 2274
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 50 gacctgcccgggcggccgctcga 28
>gb|U62316.1|RNU62316 Rattus norvegicus strain Wistar
Length = 2481
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 37 gacctgcccgggcggccgctcga 15
>emb|AJ223716.1|SAC223716 Squalus acanthias mRNA for sgk-2 serine-threonine protein kinase
Length = 3105
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 50 gacctgcccgggcggccgctcga 28
>emb|AJ001517.1|RNHERHAEM Rattus norvegicus mRNA for hereditary haemochromatosis-like protein
Length = 1706
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 41 gacctgcccgggcggccgctcga 19
>dbj|AB040807.1|AB040807 Rattus norvegicus MLS2s mRNA for melastatin like 2, complete cds
Length = 1906
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 94 gacctgcccgggcggccgctcga 72
>emb|Y10319.1|HSCARNCAR H.sapiens mRNA for carnitine carrier
Length = 1245
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 27 gacctgcccgggcggccgctcga 5
>dbj|AB032612.1|AB032612 Pinctada maxima mRNA for N14 matrix protein, complete cds
Length = 814
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>dbj|AB009308.2|AB009308 Hordeum vulgare mRNA for bpw2, complete cds
Length = 1285
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 23 gacctgcccgggcggccgctcga 1
>dbj|AB019574.1|AB019574 Homo sapiens mRNA expressed only in placental villi, clone SMAP27
Length = 106
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 84 gacctgcccgggcggccgctcga 106
>dbj|AB000814.1|AB000814 Homo sapiens mRNA for BMAL1f, partial cds
Length = 1326
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 264 gacctgcccgggcggccgctcga 286
|||||||||||||||||||||||
Sbjct: 1284 gacctgcccgggcggccgctcga 1306
>ref|NM_139017.1| Homo sapiens similar to CRL3 protein (CRL3), mRNA
Length = 1761
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 37 acctgcccgggcggccgctcga 16
>ref|NM_130806.2| Homo sapiens similar to G protein coupled receptor affecting
testicular descent (H. sapiens) (GREAT), mRNA
Length = 2838
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF403384.2| Homo sapiens chromosome 11 map 11q13
Length = 2838
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF075583.1|TGFA1 Homo sapiens transforming growth factor alpha precursor (TGFA)
gene, exon 1
Length = 284
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 247 acctgcccgggcggccgctcga 268
>gb|AF106913.1|AF106913 Homo sapiens CRL3 protein (CRL3) mRNA, complete cds
Length = 1761
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 37 acctgcccgggcggccgctcga 16
>gb|AF107491.1|AF107491 Hexamita sp.
Length = 1059
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 1032 acctgcccgggcggccgctcga 1053
>gb|AF139835.1|AF139835 Populus tremula x Populus tremuloides
Length = 2646
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 64 acctgcccgggcggccgctcga 43
>emb|AJ130894.1|HSA130894 Homo sapiens mRNA for transcription factor
Length = 3077
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>emb|AJ306902.1|RCO306902 Ricinus communis mRNA for iron transport protein 2 (ipt2 gene)
Length = 483
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>gb|AF072534.1|AF072534 Capsicum annuum
Length = 792
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 43 acctgcccgggcggccgctcga 22
>emb|AJ133126.1|RNO33126 Rattus norvegicus mRNA for kelch-like protein
Length = 1963
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 41 acctgcccgggcggccgctcga 20
>gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides
Length = 3572
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 38 acctgcccgggcggccgctcga 17
>emb|AJ416426.1|MMU416426 Mus musculus mRNA for damaged-DNA recognition protein 1 (Ddb1 gene)
Length = 4179
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 3022 acctgcccgggcggccgctcga 3043
>gb|AF117260.1|AF117260 Ceratopteris richardii ribosomal protein I mRNA, complete cds
Length = 846
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF026274.1|AF026274 Mus musculus
Length = 2761
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 2703 acctgcccgggcggccgctcga 2724
>gb|L77146.1|ZEFHSC7R Danio rerio heat shock cognate (hsc70) mRNA, complete cds
Length = 2372
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>gb|AF169248.2|AF169248 Opsanus beta
Length = 5989
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 37 acctgcccgggcggccgctcga 16
>gb|AF002248.2|AF002248 Pisum sativum
Length = 1152
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 112 acctgcccgggcggccgctcga 91
>emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integrin beta subunit (bint gene)
Length = 4179
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF106660.1|AF106660 Lycopersicon esculentum
Length = 1446
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 29 acctgcccgggcggccgctcga 8
>emb|AJ290944.2|MMU290944 Mus musculus mRNA for a stretch regulated skeletal muscle protein
(Usmg2 gene)
Length = 239
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 186 acctgcccgggcggccgctcga 207
>gb|AF127772.1|AF127772 Homo sapiens cell-line E8CASS clone E2L estradiol-induced mRNA
sequence
Length = 2306
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 37 acctgcccgggcggccgctcga 16
>gb|AF133731.2|AF133731 Rattus norvegicus strain Copenhagen
Length = 3744
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF112153.1|AF112153 Rattus norvegicus
Length = 2499
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 53 acctgcccgggcggccgctcga 32
>emb|AJ279852.1|MMU279852 Mus musculus partial mRNA for hypothetical protein, clone mvx2017
Length = 100
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 79 acctgcccgggcggccgctcga 100
>emb|AJ279850.1|MMU279850 Mus musculus partial mRNA for hypothetical protein, clone mvx2011
Length = 256
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 235 acctgcccgggcggccgctcga 256
>emb|AJ279849.1|MMU279849 Mus musculus partial mRNA for hypothetical protein, clone mvx2010
Length = 236
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 215 acctgcccgggcggccgctcga 236
>emb|AJ279847.1|MMU279847 Mus musculus partial mRNA for hypothetical protein, clone mvx2005
Length = 256
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>emb|AJ279846.1|MMU279846 Mus musculus partial mRNA for hypothetical protein, clone mvx2002
Length = 140
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 119 acctgcccgggcggccgctcga 140
>emb|AJ279839.1|MMU279839 Mus musculus partial mRNA for hypothetical protein, clone mvx11075
Length = 277
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|AF125392.1|AF125392 Homo sapiens
Length = 1394
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF118559.1|AF118559 Avena fatua strain AN265
Length = 571
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|AF098517.1|AF098517 Penicillium citrinum strain 52-5
Length = 1902
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>gb|AF095771.1|AF095771 Homo sapiens
Length = 2789
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 49 acctgcccgggcggccgctcga 28
>gb|AF061027.1|AF061027 Vernicia fordii
Length = 1703
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>gb|U58918.1|ATU58918 Arabidopsis thaliana MEK kinase (MAP3Ka) mRNA, complete cds
Length = 2267
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 35 acctgcccgggcggccgctcga 14
>gb|U55215.1|CPU55215 Cavia porcellus interleukin-5 receptor alpha precursor (gpIL-5ra)
mRNA, complete cds
Length = 2634
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 36 acctgcccgggcggccgctcga 15
>gb|AF053405.1|AF053405 Mus musculus
Length = 1362
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 32 acctgcccgggcggccgctcga 11
>emb|AJ300524.2|PEU300524 Populus euramericana mRNA for putative dehydrin (DHN1 gene)
Length = 1046
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>emb|AJ272202.1|ATH272202 Arabidopsis thaliana mRNA for mitochondrial half-ABC transporter
(STA1 gene)
Length = 2452
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 2394 acctgcccgggcggccgctcga 2415
>gb|AF061514.1|AF061514 Gossypium hirsutum
Length = 700
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 22 acctgcccgggcggccgctcga 1
>emb|AJ293762.1|ABI293762 Snythetic construct chimeric mRNA for putative endoglucanase (cel5
gene), strain D649
Length = 1074
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 762 acctgcccgggcggccgctcga 741
>gb|AF093414.1|AF093414 Saguinus oedipus
Length = 1602
Score = 44.1 bits (22), Expect = 0.077
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 265 acctgcccgggcggccgctcga 286
||||||||||||||||||||||
Sbjct: 1554 acctgcccgggcggccgctcga 1575
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: May 13, 2002 3:54 AM
Number of letters in database: 1,205,879,881
Number of sequences in database: 1,217,082
Lambda K H
1.37 0.711 0.00
Gapped
Lambda K H
1.37 0.711 4.94e-324
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 791,965
Number of Sequences: 1217082
Number of extensions: 791965
Number of successful extensions: 18007
Number of sequences better than 10.0: 254
length of query: 286
length of database: 5,500,847,177
effective HSP length: 20
effective length of query: 266
effective length of database: 5,476,505,537
effective search space: 1456750472842
effective search space used: 1456750472842
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)