The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.

BLASTX 2.2.3 [Apr-24-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Fgr-S3_1_F23_T7.seq Fgr-S3_1_F23_T7 LENGTH:382bp ;
DIRECTION:5 ; CLONE:Fgr-S3_1_F23 ; CLONELIB: n/a 
         (382 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
           922,381 sequences; 289,601,141 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_093016.1|  (XM_093016) hypothetical protein XP_093016...    35   0.19 
ref|NP_011296.1|  (NC_001139) Hypothetical ORF; Mmm2p [Sacch...    31   2.8  
gb|AAK38266.1|AF319782_60  (AF319782) ORF57 [callitrichine h...    29   8.1  

>ref|XP_093016.1| (XM_093016) hypothetical protein XP_093016 [Homo sapiens]
          Length = 222

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 23/75 (30%), Positives = 36/75 (47%), Gaps = 1/75 (1%)
 Frame = +1

Query: 94  LDIEHYQNEYENGRTRGIL-RNDPLANKLGMVEDGLSYSPIKVLALTLQSCIGRTYFASD 270
           L++   +N  EN  T GIL RN+P+     +V   L+Y P + L   L   +   Y    
Sbjct: 87  LEVLEEENLAENAETMGILLRNEPMKLPSDVVTVSLAYEPPETLTGFLPYSVEGVYGVFS 146

Query: 271 LLHYFYFVTPSA*FK 315
             + F F+ P+A +K
Sbjct: 147 PPYVFTFILPAAVYK 161



>ref|NP_011296.1| (NC_001139) Hypothetical ORF; Mmm2p [Saccharomyces cerevisiae]
 sp|P53083|YGW9_YEAST HYPOTHETICAL 52.0 KD PROTEIN IN NIF3-CLG1 INTERGENIC REGION
 pir||S64241 hypothetical protein YGL219c - yeast (Saccharomyces cerevisiae)
 emb|CAA96934.1| (Z72741) ORF YGL219c [Saccharomyces cerevisiae]
          Length = 459

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 21/52 (40%), Positives = 26/52 (49%)
 Frame = -3

Query: 278 CKRSDAKYVRPIQLCKVRASTLMGE*DRPSSTMPSLLASGSFRNIPLVRPFS 123
           CK S    +  IQ        L+ E D PS TMP L+ +GSF  IP+   FS
Sbjct: 74  CKISCKDAMLRIQTVIESNLLLINEQDTPSFTMPQLINNGSF-TIPITMTFS 124



>gb|AAK38266.1|AF319782_60 (AF319782) ORF57 [callitrichine herpesvirus 3]
          Length = 1071

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +1

Query: 127 NGRTRGILRNDPLANKLGMVEDGLSYSPIKVLALTLQSCIGRTYFASDLLHYFYFVTPSA 306
           N  T  I    PL   +  + D  SY+ ++    TL S  G  Y AS L H+ YF+  +A
Sbjct: 38  NDHTARIRALMPLEFGVFGLGDLTSYTLVREFLNTLLSLSGNGYIASILRHHVYFLLRAA 97

Query: 307 *FKH 318
            F +
Sbjct: 98  SFSN 101



  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  May 11, 2002  4:54 AM
  Number of letters in database: 289,601,141
  Number of sequences in database:  922,381
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.267   0.0410 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,180,340
Number of Sequences: 922381
Number of extensions: 3853424
Number of successful extensions: 8447
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8447
length of database: 289,601,141
effective HSP length: 102
effective length of database: 195,518,279
effective search space used: 4692438696
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)