The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTN 2.2.3 [Apr-24-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Fgr-S3_1_G06_T7.seq Fgr-S3_1_G06_T7 LENGTH:412bp ;
DIRECTION:5 ; CLONE:Fgr-S3_1_G06 ; CLONELIB: n/a
(412 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
1,217,082 sequences; 1,205,879,881 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF134704.1|AF134704 Pseudomonas fluorescens ribosomal RN... 634 e-179
gb|AF134705.1|AF134705 Pseudomonas fluorescens ribosomal RN... 626 e-177
gb|AE004949.1|AE004949 Pseudomonas aeruginosa PA01, section... 611 e-172
gb|AE004883.1|AE004883 Pseudomonas aeruginosa PA01, section... 611 e-172
gb|AE004843.1|AE004843 Pseudomonas aeruginosa PA01, section... 611 e-172
gb|AE004502.1|AE004502 Pseudomonas aeruginosa PA01, section... 611 e-172
emb|Y00432.1|PARRN23S Pseudomonas aeruginosa gene for 23S r... 595 e-167
gb|AF079809.1|AF079809 Azotobacter vinelandii large subunit... 527 e-147
emb|AJ306882.1|HPA306882 Halomonas pacifica partial 23S rRN... 404 e-110
gb|AE003870.1|AE003870 Xylella fastidiosa 9a5c, section 16 ... 400 e-109
gb|AE003861.1|AE003861 Xylella fastidiosa 9a5c, section 7 o... 400 e-109
emb|AJ306878.1|HEU306878 Halomonas eurihalina partial 23S r... 393 e-106
emb|AJ306877.1|HEL306877 Halomonas elongata partial 23S rRN... 393 e-106
emb|AJ306880.1|HMA306880 Halomonas marina partial 23S rRNA ... 377 e-102
emb|X87289.1|PS23S5022 P.stutzeri 23S rRNA gene 375 e-101
emb|AJ306874.1|HAQ306874 Halomonas aquamarina partial 23S r... 373 e-100
emb|AJ306873.1|CSA306873 Chromohalobacter salexigens partia... 373 e-100
emb|AJ306871.1|CIS306871 Chromohalobacter israelensis parti... 373 e-100
emb|AJ306870.1|CCA306870 Chromohalobacter canadensis partia... 373 e-100
emb|AJ306883.1|HPA306883 Halomonas pantelleriensis partial ... 367 6e-99
emb|X87280.1|AC23S3000 A.calcoaceticus 23S rRNA gene 365 2e-98
emb|AJ306884.1|HSA306884 Halomonas salina partial 23S rRNA ... 359 1e-96
emb|AJ306885.1|HSU306885 Halomonas subglaciescola partial 2... 353 9e-95
gb|AF362021.1|AF362021 Acidithiobacillus thiooxidans strain... 349 1e-93
emb|AJ306886.1|HVA306886 Halomonas variabilis partial 23S r... 349 1e-93
emb|AJ306881.1|HME306881 Halomonas meridiana partial 23S rR... 349 1e-93
gb|U65012.1|PSU65012 Pseudomonas stutzeri 16S rRNA, 23S rRN... 331 3e-88
gb|L03788.1|PSERRNAPM Pseudomonas perfectomarina 23S riboso... 331 3e-88
gb|M26757.1|PSERGGA P.aeruginosa 23S rRNA gene 291 3e-76
emb|X68323.1|BPG23S B.pertussis gene for 23S ribosomal RNA 281 3e-73
emb|X68368.1|BP23SRRA B.parapertussis gene for 23S ribosoma... 281 3e-73
emb|X70371.1|BB23SRRA B.bronchiseptica gene for 23S rRNA 274 7e-71
emb|AJ414159.1|AJ414159 Yersinia pestis strain CO92 complet... 260 1e-66
emb|AJ414158.1|AJ414158 Yersinia pestis strain CO92 complet... 260 1e-66
emb|AJ414156.1|AJ414156 Yersinia pestis strain CO92 complet... 260 1e-66
emb|AJ414146.1|AJ414146 Yersinia pestis strain CO92 complet... 260 1e-66
emb|AJ414141.1|AJ414141 Yersinia pestis strain CO92 complet... 260 1e-66
emb|X87282.1|AF23S3003 A.faecalis 23S rRNA gene 254 6e-65
gb|AF362022.1|AF362022 Acidithiobacillus ferrooxidans strai... 252 2e-64
gb|U18089.1|TFU18089 Thiobacillus ferrooxidans 16S rRNA gen... 250 1e-63
gb|U77925.1|YEU77925 Yersinia enterocolitica 23S ribosomal ... 248 4e-63
gb|U77924.1|SEU77924 Salmonella enterica IIIa 51:z4,z23:- 2... 248 4e-63
gb|AF211871.1|AF211871 Zymobacter palmae 16S ribosomal RNA ... 246 2e-62
emb|X87285.1|LM23S2157 L.mucor 23S rRNA gene, DSM 2157 T 246 2e-62
gb|U77928.1|CFU77928 Citrobacter freundii 23S ribosomal RNA... 244 6e-62
emb|X87288.1|BD23S1635 B.diminuta 23S rRNA gene 244 6e-62
gb|AF273255.1|AF273255 Stenotrophomonas maltophilia 23S rib... 240 9e-61
gb|AF175765.1|AF175765 Stenotrophomonas maltophilia strain ... 240 9e-61
emb|AJ306875.1|HCU306875 Halomonas cupida partial 23S rRNA ... 238 4e-60
gb|AE005629.1|AE005629 Escherichia coli O157:H7 EDL933 geno... 236 1e-59
gb|AE005616.1|AE005616 Escherichia coli O157:H7 EDL933 geno... 236 1e-59
gb|AE005607.1|AE005607 Escherichia coli O157:H7 EDL933 geno... 236 1e-59
gb|AE005555.1|AE005555 Escherichia coli O157:H7 EDL933 geno... 236 1e-59
gb|AE000461.1|AE000461 Escherichia coli K12 236 1e-59
gb|AF053968.1|AF053968 Escherichia coli strain A 8190 rrlC ... 236 1e-59
gb|AF053966.1|AF053966 Escherichia coli rrlD operon, comple... 236 1e-59
gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to... 236 1e-59
dbj|AB035924.1|AB035924 Escherichia coli O157:H7 purH, rrsE... 236 1e-59
dbj|AB035922.1|AB035922 Escherichia coli O157:H7 yieP, rrsC... 236 1e-59
dbj|AB035921.1|AB035921 Escherichia coli O157:H7 murI, rrsB... 236 1e-59
dbj|AB035920.1|AB035920 Escherichia coli O157:H7 hemG, rrsA... 236 1e-59
dbj|AP002567.1|AP002567 Escherichia coli O157:H7 DNA, compl... 236 1e-59
dbj|AP002566.1|AP002566 Escherichia coli O157:H7 DNA, compl... 236 1e-59
gb|AF175764.1|AF175764 Stenotrophomonas maltophilia strain ... 232 2e-58
gb|U77923.1|SEU77923 Salmonella enterica IIIa 23S ribosomal... 232 2e-58
gb|AE000474.1|AE000474 Escherichia coli K12 228 4e-57
gb|AE000471.1|AE000471 Escherichia coli K12 228 4e-57
gb|AE000453.1|AE000453 Escherichia coli K12 228 4e-57
gb|AE000406.1|AE000406 Escherichia coli K12 228 4e-57
gb|AE000345.1|AE000345 Escherichia coli K12 228 4e-57
gb|AF263562.1|AF263562 Secondary endosymbiont of Heteropsyl... 228 4e-57
gb|AF263561.1|AF263561 secondary endosymbiont of Glycaspis ... 228 4e-57
emb|AJ306872.1|CMA306872 Chromohalobacter marismortui parti... 228 4e-57
gb|AF053967.1|AF053967 Escherichia coli strain ECOR 24 rrlB... 228 4e-57
gb|AF053964.1|AF053964 Escherichia coli strain ECOR 52 rrlD... 228 4e-57
gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal regio... 228 4e-57
emb|AJ278710.1|ECO278710 Escherichia coli 23S rRNA gene, st... 228 4e-57
gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to... 228 4e-57
gb|J01695.1|ECORGNB E.coli rRNA operon (rrnB) coding for Gl... 228 4e-57
gb|U72488.1|CVU72488 Cloning vector pRNA8 228 4e-57
emb|X87293.1|VV23S2756 V.vulnificus 23S rRNA gene, biotype 1 228 4e-57
emb|X87294.1|VV23S2138 V.vulnificus 23S rRNA gene, biotype 2 228 4e-57
emb|X87284.1|KP23S1388 K.pneumoniae 23S rRNA gene, ATCC 138... 228 4e-57
dbj|D90887.1|D90887 E.coli genomic DNA, Kohara clone #437(5... 228 4e-57
dbj|D90886.1|D90886 E.coli genomic DNA, Kohara clone #436(5... 228 4e-57
gb|L10328.1|ECOUW82 E. coli; the region from 81.5 to 84.5 m... 228 4e-57
emb|V00348.1|ECRRNBZ E. coli ribosomal operon rrnB encoding... 228 4e-57
emb|V00331.1|ECRNA3 E. coli gene rrnB (codes for 23S riboso... 228 4e-57
gb|AF175763.1|AF175763 Stenotrophomonas maltophilia strain ... 224 6e-56
gb|AY033301.1| Uncultured gamma proteobacterium MB11B11 16S... 222 2e-55
emb|AJ306887.1|HVE306887 Halomonas venusta partial 23S rRNA... 222 2e-55
emb|AJ306879.1|HHA306879 Halomonas halmophila partial 23S r... 222 2e-55
emb|AJ306876.1|HDE306876 Halomonas desiderata partial 23S r... 222 2e-55
gb|AE008895.1|AE008895 Salmonella typhimurium LT2, section ... 220 9e-55
gb|AE008893.1|AE008893 Salmonella typhimurium LT2, section ... 220 9e-55
gb|AE008886.1|AE008886 Salmonella typhimurium LT2, section ... 220 9e-55
gb|AE008881.1|AE008881 Salmonella typhimurium LT2, section ... 220 9e-55
gb|AE008856.1|AE008856 Salmonella typhimurium LT2, section ... 220 9e-55
gb|AE008706.1|AE008706 Salmonella typhimurium LT2, section ... 220 9e-55
gb|AE005632.1|AE005632 Escherichia coli O157:H7 EDL933 geno... 220 9e-55
gb|AE005196.1|AE005196 Escherichia coli O157:H7 EDL933 geno... 220 9e-55
gb|AE000129.1|AE000129 Escherichia coli K12 220 9e-55
gb|AF263558.1|AF263558 Secondary endosymbiont of Blastopsyl... 220 9e-55
gb|AF263556.1|AF263556 Secondary endosymbiont of Aphalaroid... 220 9e-55
emb|AL627282.1|AL627282 Salmonella enterica serovar Typhi (... 220 9e-55
emb|AL627280.1|AL627280 Salmonella enterica serovar Typhi (... 220 9e-55
emb|AL627279.1|AL627279 Salmonella enterica serovar Typhi (... 220 9e-55
emb|AL627278.1|AL627278 Salmonella enterica serovar Typhi (... 220 9e-55
emb|AL627266.1|AL627266 Salmonella enterica serovar Typhi (... 220 9e-55
gb|AF170176.1|STYSTMF1 Salmonella typhimurium LT2 clone STM... 220 9e-55
gb|AF233324.1|STYSTMD1 Salmonella typhimurium LT2 clone STM... 220 9e-55
gb|AF053965.1|AF053965 Escherichia coli strain ECOR 40 rrlB... 220 9e-55
gb|AF053963.1|AF053963 Escherichia coli strain ECOR 35 rrlC... 220 9e-55
gb|U04734.1|STU04734 Salmonella typhi Rawlings 5S ribosomal... 220 9e-55
gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6 220 9e-55
dbj|AB035926.1|AB035926 Escherichia coli O157:H7 yaeD, rrsH... 220 9e-55
dbj|AB035923.1|AB035923 Escherichia coli O157:H7 yrdA, rrsD... 220 9e-55
dbj|AP002564.1|AP002564 Escherichia coli O157:H7 DNA, compl... 220 9e-55
dbj|AP002550.1|AP002550 Escherichia coli O157:H7 DNA, compl... 220 9e-55
dbj|D83536.2|ECOTSF Escherichia coli genomic DNA. (4.1 - 6.... 220 9e-55
dbj|D12649.1|ECORRNH E.coli rrnH gene for rRNAs and tRNAs 220 9e-55
gb|AE006010.1| Caulobacter crescentus section 336 of 359 o... 218 3e-54
gb|AE005930.1| Caulobacter crescentus section 256 of 359 o... 218 3e-54
emb|X65487.1|PS23SRRN P.shigelloides gene for 23S rRNA 218 3e-54
emb|X87281.1|AH23S3018 A.hydrophila 23S rRNA gene 218 3e-54
gb|AF407378.1|AF407378 Aeromonas culicicola 23S ribosomal R... 216 1e-53
gb|U77921.1|SEU77921 Salmonella enterica II 1,9,12:1,w:e,n,... 216 1e-53
gb|U77920.1|SEU77920 Salmonella enterica 1,4,[5],12,:i:1,2 ... 216 1e-53
gb|U77919.1|SEU77919 Salmonella enterica 23S ribosomal RNA ... 216 1e-53
emb|X67946.1|AH23SRRN A.hydrophila rrn gene for 23S rRNA 216 1e-53
gb|AF369903.1|AF369903 Pseudomonas fluorescens 23S ribosoma... 214 5e-53
gb|AE005489.1|AE005489 Escherichia coli O157:H7 EDL933 geno... 214 5e-53
gb|AE008820.1|AE008820 Salmonella typhimurium LT2, section ... 212 2e-52
gb|AE002551.2|AE002551 Neisseria meningitidis serogroup B s... 212 2e-52
gb|AE002516.1|AE002516 Neisseria meningitidis serogroup B s... 212 2e-52
gb|AE002387.1|AE002387 Neisseria meningitidis serogroup B s... 212 2e-52
gb|AE002365.1|AE002365 Neisseria meningitidis serogroup B s... 212 2e-52
emb|AL627276.1|AL627276 Salmonella enterica serovar Typhi (... 212 2e-52
emb|AJ294423.1|VNA294423 Vibrio navarrensis 23S rRNA gene, ... 212 2e-52
emb|AL162758.2|NMA7Z2491 Neisseria meningitidis serogroup A... 212 2e-52
emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A... 212 2e-52
emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A... 212 2e-52
emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A... 212 2e-52
dbj|AB035925.1|AB035925 Escherichia coli O157:H7 clpB, rrsG... 212 2e-52
dbj|AP002562.1|AP002562 Escherichia coli O157:H7 DNA, compl... 212 2e-52
emb|X67300.1|NM23SRRNA N.meningitidis gene for 23S rRNA 212 2e-52
gb|AE006209.1|AE006209 Pasteurella multocida PM70 section 1... 204 5e-50
gb|AE006193.1|AE006193 Pasteurella multocida PM70 section 1... 204 5e-50
gb|AE006186.1|AE006186 Pasteurella multocida PM70 section 1... 204 5e-50
gb|AE006130.1|AE006130 Pasteurella multocida PM70 section 9... 204 5e-50
gb|AE006082.1|AE006082 Pasteurella multocida PM70 section 4... 204 5e-50
gb|AE006065.1|AE006065 Pasteurella multocida PM70 section 3... 204 5e-50
gb|U77927.1|SBU77927 Salmonella bongori 66:z41:- 23S riboso... 204 5e-50
gb|U77926.1|SEU77926 Salmonella enterica IV 43:z4,z23:- 23S... 204 5e-50
emb|X67293.1|NG23SRRNA N.gonorrhoeae gene for 23S rRNA 204 5e-50
gb|U77929.1|SEU77929 Salmonella enterica V 1,6,14,25:a:e,n,... 200 8e-49
dbj|AP001119.1|AP001119 Buchnera sp. APS genomic DNA, compl... 200 8e-49
emb|AJ294425.1|VSP294425 Vibrio splendidus 23S rRNA gene, s... 196 1e-47
emb|AJ294424.1|VPE294424 Vibrio pelagius 23S rRNA gene, str... 196 1e-47
emb|AJ294422.1|VME294422 Vibrio mediterranei 23S rRNA gene,... 196 1e-47
emb|X06765.1|RARRN23S Ruminobacter amylophilus 23S rRNA 194 5e-47
gb|AF129498.1|AF129498 Buchnera aphidicola natural-host Diu... 192 2e-46
gb|U09230.1|BAU09230 Buchnera aphidicola shikimate dehydrog... 192 2e-46
gb|U77922.1|SEU77922 Salmonella enterica IIIb 61:i:z 23S ri... 192 2e-46
gb|AF369904.1|AF369904 Pseudomonas aeruginosa 23S ribosomal... 190 8e-46
gb|U32847.1|U32847 Haemophilus influenzae Rd 190 8e-46
gb|U32755.1|U32755 Haemophilus influenzae Rd 190 8e-46
gb|U32745.1|U32745 Haemophilus influenzae Rd 190 8e-46
gb|U32742.1|U32742 Haemophilus influenzae Rd 190 8e-46
gb|U32707.1|U32707 Haemophilus influenzae Rd 190 8e-46
gb|U32697.1|U32697 Haemophilus influenzae Rd 190 8e-46
gb|AE004319.1|AE004319 Vibrio cholerae chromosome I, sectio... 188 3e-45
gb|AE004157.1|AE004157 Vibrio cholerae chromosome I, sectio... 188 3e-45
gb|AE004126.1|AE004126 Vibrio cholerae chromosome I, sectio... 188 3e-45
gb|AE004119.1|AE004119 Vibrio cholerae chromosome I, sectio... 188 3e-45
gb|AE004106.1|AE004106 Vibrio cholerae chromosome I, sectio... 188 3e-45
gb|AE004097.1|AE004097 Vibrio cholerae chromosome I, sectio... 188 3e-45
gb|AF263560.1|AF263560 Secondary endosymbiont of Calophya s... 188 3e-45
gb|AF263557.1|AF263557 Secondary endosymbiont of Bactericer... 188 3e-45
emb|AJ310649.1|VAG310649 Vibrio agarivorans 23S rRNA gene, ... 188 3e-45
emb|AJ294421.1|VLE294421 Vibrio lentus 23S rRNA gene, strai... 188 3e-45
gb|U65886.1|STU65886 Salmonella typhimurium 23S ribosomal R... 186 1e-44
gb|S44313.1|S44313 23S ribosomal RNA [Actinobacillus actino... 182 2e-43
emb|X70370.1|BA23SRRA B.avium gene for 23S rRNA 182 2e-43
emb|X54632.1|AA23SRRNP A.actinomycetemcomitans 23S ribosoma... 182 2e-43
gb|AE004340.1|AE004340 Vibrio cholerae chromosome I, sectio... 180 8e-43
gb|AF268217.2|AF268217 Uncultured proteobacterium EBAC27G05... 176 1e-41
gb|AF012420.1|AF012420 Ralstonia solanacearum strain PD2762... 176 1e-41
gb|AF012418.1|AF012418 Ralstonia solanacearum strain PD1449... 176 1e-41
gb|AF012417.1|AF012417 Ralstonia solanacearum strain PD1445... 176 1e-41
gb|AY033314.1| Uncultured gamma proteobacterium MB12D03 16S... 172 2e-40
gb|AY033311.1| Uncultured gamma proteobacterium MB11G09 16S... 172 2e-40
gb|AF279106.1|AF279106 Uncultured proteobacterium EBAC31A08... 172 2e-40
gb|AE004341.1|AE004341 Vibrio cholerae chromosome I, sectio... 172 2e-40
gb|AF263559.1|AF263559 Secondary endosymbiont of Cacopsylla... 172 2e-40
emb|AJ310650.1|VAG310650 Vibrio agarivorans 23S rRNA gene, ... 172 2e-40
gb|AF129500.1|AF129500 Buchnera aphidicola natural-host Mel... 170 7e-40
emb|AL646081.1|AL646081 Ralstonia solanacearum GMI1000 mega... 168 3e-39
emb|AL646073.1|AL646073 Ralstonia solanacearum GMI1000 chro... 168 3e-39
emb|AL646072.1|AL646072 Ralstonia solanacearum GMI1000 chro... 168 3e-39
emb|AL646064.1|AL646064 Ralstonia solanacearum GMI1000 chro... 168 3e-39
gb|AF012421.1|AF012421 Ralstonia pickettii strain PD1515 23... 168 3e-39
gb|AF012419.1|AF012419 Ralstonia solanacearum strain PD1450... 168 3e-39
gb|AF012416.1|AF012416 Ralstonia solanacearum strain PD278 ... 168 3e-39
emb|Y17184.1|BPY17184 Burkholderia pseudomallei 23S rRNA gene 168 3e-39
emb|Y17183.1|BMY17183 Burkholderia mallei 23S rRNA gene 168 3e-39
gb|AF352393.1| Candidatus Procabacter acanthamoebae 23S rib... 167 1e-38
gb|AF352392.1| Candidatus Procabacter sp. UWC6 23S ribosoma... 167 1e-38
gb|AF369905.1|AF369905 Serratia marcescens 23S ribosomal RN... 167 1e-38
emb|AJ294420.1|VLE294420 Vibrio lentus 23S rRNA gene, strai... 165 4e-38
gb|AF090108.1|AF090108 Haemophilus influenzae strain MinnA ... 165 4e-38
gb|AF129499.1|AF129499 Buchnera aphidicola natural-host Sch... 163 2e-37
emb|X79704.1|CB23SRR C.burnetii 23Sr RNA gene 163 2e-37
gb|U02305.1|BPU02305 Burkholderia pseudomallei 23S ribosoma... 163 2e-37
gb|U60339.1|DFU60339 Denitrifying Fe-oxidizing bacteria... 161 7e-37
emb|Y18705.1|BVI18705 Burkholderia vietnamiensis 23S rRNA g... 159 3e-36
emb|Y18704.1|BMU18704 Burkholderia multivorans 23S rRNA gen... 159 3e-36
emb|X87292.1|TC23S5495 T.cuprinus 23S rRNA gene 159 3e-36
emb|X16368.1|PC23RRNA Pseudomonas cepacia gene for 23S ribo... 159 3e-36
emb|Y17182.1|BGY17182 Burkholderia gladioli 23S rRNA gene 159 3e-36
gb|AF211870.1|AF211870 Primary endosymbiont of Bemisia arge... 153 2e-34
gb|AY033303.1| Uncultured alpha proteobacterium MB11D08 16S... 151 7e-34
gb|AF090110.1|AF090110 Haemophilus influenzae strain 772 23... 151 7e-34
gb|AF090106.1|AF090106 Haemophilus influenzae strain Eagan ... 147 1e-32
gb|AY033299.1| Uncultured alpha proteobacterium MB11B07 16S... 143 2e-31
gb|AF090104.1|AF090104 Haemophilus influenzae strain RM118 ... 143 2e-31
gb|AY033298.1| Uncultured alpha proteobacterium MB11B03 16S... 141 7e-31
gb|AF268236.2|AF268236 Uncultured proteobacterium EBAC37G09... 141 7e-31
pdb|1C2W|B Chain B, 23s Rrna Structure Fitted To A Cryo-Ele... 141 7e-31
gb|U88708.1|PMU88708 Proteus mirabilis 23S ribosomal RNA ge... 141 7e-31
gb|M35804.1|STYRGGB Unidentified eubacterium 23S rRNA gene 141 7e-31
gb|AE009481.1|AE009481 Brucella melitensis strain 16M chrom... 139 3e-30
gb|AE009462.1|AE009462 Brucella melitensis strain 16M chrom... 139 3e-30
gb|AE009657.1|AE009657 Brucella melitensis strain 16M chrom... 139 3e-30
gb|AF220149.1|AF220149 Brucella melitensis ribosomal RNA op... 139 3e-30
gb|AF220148.1|AF220148 Brucella melitensis ribosomal RNA op... 139 3e-30
gb|AF220147.1|AF220147 Brucella melitensis ribosomal RNA op... 139 3e-30
gb|AF191073.1|AF191073 Stealth virus 1 clone 3B43, genomic ... 139 3e-30
gb|L39095.1|BAORG23S Bartonella bacilliformis 23S ribosomal... 139 3e-30
gb|K02681.1|ECORRGA10A E. coli 23S ribosomal RNA, fragment ... 139 3e-30
gb|U88707.1|CAU88707 Citrobacter amalonaticus 23S ribosomal... 137 1e-29
gb|AY033322.1| Uncultured alpha proteobacterium MB21A02 16S... 135 4e-29
gb|AY033312.1| Uncultured alpha proteobacterium MB12A07 16S... 135 4e-29
emb|X75567.1|TCRNA23S T.cuprinus gene for 23S ribosomal RNA 135 4e-29
gb|AF209076.1|AF209076 Agrobacterium vitis strain Ag 162 23... 131 6e-28
gb|AF209071.1|AF209071 Agrobacterium vitis strain LMG 8750 ... 131 6e-28
gb|AF207785.1|AF207785 Rhizobium leguminosarum strain LMG 8... 131 6e-28
gb|AF207782.1|AF207782 Rhizobium leguminosarum 23S ribosoma... 131 6e-28
gb|U47351.1|RLU47351 Rhizobium leguminosarum bv. trifolii 2... 131 6e-28
gb|U47350.1|RLU47350 Rhizobium leguminosarum bv. trifolii 2... 131 6e-28
>gb|AF134704.1|AF134704 Pseudomonas fluorescens ribosomal RNA operon rrnB, complete sequence
Length = 5679
Score = 634 bits (320), Expect = e-179
Identities = 360/372 (96%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3907 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 3848
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 3847 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgggtgtttt 3788
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3787 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 3728
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaagatgacaccc 257
||||||||||||||||||||||||||||||||||||||||| ||| | | ||| ||||
Sbjct: 3727 tcaactcaccttcacaggcttacagaacgctcctctaccgcatca-cttacgtgataccc 3669
Query: 258 gtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 317
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3668 gtagcttcggtgtatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 3609
Query: 318 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3608 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 3549
Query: 378 ccttcccacatc 389
||||||||||||
Sbjct: 3548 ccttcccacatc 3537
>gb|AF134705.1|AF134705 Pseudomonas fluorescens ribosomal RNA operon rrnC, partial sequence
Length = 4958
Score = 626 bits (316), Expect = e-177
Identities = 359/372 (96%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3577 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 3518
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 3517 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgggtgtttt 3458
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 3398
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaagatgacaccc 257
||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||||
Sbjct: 3397 tcaactcaccttcacaggcttacagaacgctcctctaccgcatca-cttgcgtgataccc 3339
Query: 258 gtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 317
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3338 gtagcttcggtgtatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 3279
Query: 318 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3278 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 3219
Query: 378 ccttcccacatc 389
||||||||||||
Sbjct: 3218 ccttcccacatc 3207
>gb|AE004949.1|AE004949 Pseudomonas aeruginosa PA01, section 510 of 529 of the complete
genome
Length = 11176
Score = 611 bits (308), Expect = e-172
Identities = 357/372 (95%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 3377 gtacaggaatattaacctgtttcccatcgactacgcttttcagcctcgccttaggaaccg 3436
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||
Sbjct: 3437 actaaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgggtgtttt 3496
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 3556
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaagatgacaccc 257
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 3557 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtca-cttacgtgacaccc 3615
Query: 258 gtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 317
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3616 gcagcttcggtgtgtggtttgagccccgttacatcttccgcgcaggccgactcgactagt 3675
Query: 318 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3676 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 3735
Query: 378 ccttcccacatc 389
||||||||||||
Sbjct: 3736 ccttcccacatc 3747
>gb|AE004883.1|AE004883 Pseudomonas aeruginosa PA01, section 444 of 529 of the complete
genome
Length = 12065
Score = 611 bits (308), Expect = e-172
Identities = 357/372 (95%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1891 gtacaggaatattaacctgtttcccatcgactacgcttttcagcctcgccttaggaaccg 1950
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||
Sbjct: 1951 actaaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgggtgtttt 2010
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2011 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 2070
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaagatgacaccc 257
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 2071 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtca-cttacgtgacaccc 2129
Query: 258 gtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 317
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2130 gcagcttcggtgtgtggtttgagccccgttacatcttccgcgcaggccgactcgactagt 2189
Query: 318 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2190 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 2249
Query: 378 ccttcccacatc 389
||||||||||||
Sbjct: 2250 ccttcccacatc 2261
>gb|AE004843.1|AE004843 Pseudomonas aeruginosa PA01, section 404 of 529 of the complete genome
Length = 11171
Score = 611 bits (308), Expect = e-172
Identities = 357/372 (95%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 9638 gtacaggaatattaacctgtttcccatcgactacgcttttcagcctcgccttaggaaccg 9697
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||
Sbjct: 9698 actaaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgggtgtttt 9757
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9758 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 9817
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaagatgacaccc 257
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 9818 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtca-cttacgtgacaccc 9876
Query: 258 gtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 317
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9877 gcagcttcggtgtgtggtttgagccccgttacatcttccgcgcaggccgactcgactagt 9936
Query: 318 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9937 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 9996
Query: 378 ccttcccacatc 389
||||||||||||
Sbjct: 9997 ccttcccacatc 10008
>gb|AE004502.1|AE004502 Pseudomonas aeruginosa PA01, section 63 of 529 of the complete genome
Length = 10146
Score = 611 bits (308), Expect = e-172
Identities = 357/372 (95%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1534 gtacaggaatattaacctgtttcccatcgactacgcttttcagcctcgccttaggaaccg 1475
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||
Sbjct: 1474 actaaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgggtgtttt 1415
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 1355
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaagatgacaccc 257
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 1354 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtca-cttacgtgacaccc 1296
Query: 258 gtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 317
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 gcagcttcggtgtgtggtttgagccccgttacatcttccgcgcaggccgactcgactagt 1236
Query: 318 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 1176
Query: 378 ccttcccacatc 389
||||||||||||
Sbjct: 1175 ccttcccacatc 1164
>emb|Y00432.1|PARRN23S Pseudomonas aeruginosa gene for 23S ribosomal RNA
Length = 2893
Score = 595 bits (300), Expect = e-167
Identities = 355/372 (95%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1394 gtacaggaatattaacctgtttcccatcgactacgcttttcagcctcgccttaggaaccg 1335
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||||||||||||||||||||||||||||||||| |||||||||||||||||| | | |||
Sbjct: 1334 actaaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgggtgcttt 1275
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 1215
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaagatgacaccc 257
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 1214 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtca-cttacgtgacaccc 1156
Query: 258 gtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagt 317
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 gcagcttcggtgtgtggtttgagccccgttacatcttccgcgcaggccgactcgactagt 1096
Query: 318 gagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaag 377
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1095 gagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtctaag 1036
Query: 378 ccttcccacatc 389
||||||||||||
Sbjct: 1035 ccttcccacatc 1024
>gb|AF079809.1|AF079809 Azotobacter vinelandii large subunit ribosomal RNA gene, complete
sequence
Length = 2834
Score = 527 bits (266), Expect = e-147
Identities = 350/373 (93%), Gaps = 5/373 (1%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 1324 gtacgggaatattaacccgtttcccatcgactacgcttttcagcctcgccttaggggccg 1265
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 1264 actcaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtggatgtttt 1205
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1204 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcctc 1145
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatc-aaagatgacacc 256
|| |||||||||||||||| ||||||| ||||||||||||| |||| |||| ||||
Sbjct: 1144 tcgactcaccttcacaggcgtacagaa--ctcctctaccgcg-catcttgcgatg-cacc 1089
Query: 257 cgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactag 316
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 cgtagcttcggtgcctggtttgagccccgttacatcttccgcgcaggccgactcgactag 1029
Query: 317 tgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaa 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 tgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaa 969
Query: 377 gccttcccacatc 389
|||||||||||||
Sbjct: 968 gccttcccacatc 956
>emb|AJ306882.1|HPA306882 Halomonas pacifica partial 23S rRNA gene, strain DSM 4742
Length = 2910
Score = 404 bits (204), Expect = e-110
Identities = 336/376 (89%), Gaps = 3/376 (0%)
Strand = Plus / Minus
Query: 15 gaggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttaggga 74
||||||| |||||||||||| |||| ||||||||||||| |||| ||||||||||||||
Sbjct: 1402 gaggtacgggaatattaacccgtttcccatcgactacgcctttcggcctcgccttagggg 1343
Query: 75 ccgactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagt 134
|||||| || |||| |||||| ||| | ||| || |||||||||| ||||| | ||||
Sbjct: 1342 ccgactcactctgctccgattagcgtcgaacagaaacccttggtcttccggcgggggagt 1283
Query: 135 ttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagc 194
||||||||| | || |||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 1282 ttttcactccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcgagc 1223
Query: 195 ttctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaa-gatgac 253
||||||||||||||||| |||||||| ||||||||||||||| || ||| || ||
Sbjct: 1222 ttctcaactcaccttcattggcttacacgacgctcctctaccgc-tcgtcattcgacga- 1165
Query: 254 acccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgac 313
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 acccgtagcttcggcacctggtttgagccccgttacatcttccgcgcaggccgactcgac 1105
Query: 314 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 373
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1104 tagtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtc 1045
Query: 374 taagccttcccacatc 389
||||||||||||||||
Sbjct: 1044 taagccttcccacatc 1029
>gb|AE003870.1|AE003870 Xylella fastidiosa 9a5c, section 16 of 229 of the complete genome
Length = 12917
Score = 400 bits (202), Expect = e-109
Identities = 338/378 (89%), Gaps = 4/378 (1%)
Strand = Plus / Minus
Query: 14 cgaggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttaggg 73
|||||| |||||||||||||||| || |||||||||||| |||| |||||||||||||
Sbjct: 11324 cgaggtgcaggaatattaacctgcttcccatcgactacggctttcgccctcgccttaggg 11265
Query: 74 accgactaaccctgcgtcgattaacgttgcgca-ggaaaccttggtctttcggcgtgcga 132
||||||||||||||| |||||||||||||||| ||||||||| | |||||||||| |
Sbjct: 11264 gccgactaaccctgcgccgattaacgttgcgcaaggaaaccttaggctttcggcgtatgg 11205
Query: 133 gtttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaa 192
||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 11204 gtttttcacccatattatcgttactcatgtcagcattcgcacttccgatacctccagcaa 11145
Query: 193 gcttctcaactcaccttcacaggcttacagaacgctcctctaccgcg-tcatcaaagatg 251
|||||||||||||||||||||||||||| |||||||||||||||||| || ||| |||
Sbjct: 11144 gcttctcaactcaccttcacaggcttacggaacgctcctctaccgcgcatataaaatatg 11085
Query: 252 acacccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcg 311
||||| ||||||||| ||| | || |||||||||| ||||||||||||| ||||||||
Sbjct: 11084 -caccccaagcttcggttcatagctt-agccccgttaaatcttccgcgcagaccgactcg 11027
Query: 312 actagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctg 371
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 11026 accagtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctggctg 10967
Query: 372 tctaagccttcccacatc 389
|||| ||||| |||||||
Sbjct: 10966 tctatgcctttccacatc 10949
>gb|AE003861.1|AE003861 Xylella fastidiosa 9a5c, section 7 of 229 of the complete genome
Length = 10298
Score = 400 bits (202), Expect = e-109
Identities = 338/378 (89%), Gaps = 4/378 (1%)
Strand = Plus / Minus
Query: 14 cgaggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttaggg 73
|||||| |||||||||||||||| || |||||||||||| |||| |||||||||||||
Sbjct: 4520 cgaggtgcaggaatattaacctgcttcccatcgactacggctttcgccctcgccttaggg 4461
Query: 74 accgactaaccctgcgtcgattaacgttgcgca-ggaaaccttggtctttcggcgtgcga 132
||||||||||||||| |||||||||||||||| ||||||||| | |||||||||| |
Sbjct: 4460 gccgactaaccctgcgccgattaacgttgcgcaaggaaaccttaggctttcggcgtatgg 4401
Query: 133 gtttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaa 192
||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4400 gtttttcacccatattatcgttactcatgtcagcattcgcacttccgatacctccagcaa 4341
Query: 193 gcttctcaactcaccttcacaggcttacagaacgctcctctaccgcg-tcatcaaagatg 251
|||||||||||||||||||||||||||| |||||||||||||||||| || ||| |||
Sbjct: 4340 gcttctcaactcaccttcacaggcttacggaacgctcctctaccgcgcatataaaatatg 4281
Query: 252 acacccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcg 311
||||| ||||||||| ||| | || |||||||||| ||||||||||||| ||||||||
Sbjct: 4280 -caccccaagcttcggttcatagctt-agccccgttaaatcttccgcgcagaccgactcg 4223
Query: 312 actagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctg 371
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 4222 accagtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctggctg 4163
Query: 372 tctaagccttcccacatc 389
|||| ||||| |||||||
Sbjct: 4162 tctatgcctttccacatc 4145
>emb|AJ306878.1|HEU306878 Halomonas eurihalina partial 23S rRNA gene, strain ATCC 49336
Length = 2911
Score = 393 bits (198), Expect = e-106
Identities = 335/377 (88%), Gaps = 4/377 (1%)
Strand = Plus / Minus
Query: 15 gaggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttaggga 74
||||||| |||||||| ||| |||| ||||||||||||| |||| ||||||||||||||
Sbjct: 1404 gaggtacgggaatattgacccgtttcccatcgactacgcctttcggcctcgccttagggg 1345
Query: 75 ccgactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagt 134
|||||| || |||| |||||| ||| | ||| || |||||||||| ||||| | ||||
Sbjct: 1344 ccgactcactctgctccgattagcgtcgaacagaaacccttggtcttccggcgggggagt 1285
Query: 135 ttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagc 194
||||||||| | || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1284 ttttcactccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcaagc 1225
Query: 195 ttctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaa--gatga 252
| || ||||||||||| ||| |||| ||||||||||||||| ||||| | |||||
Sbjct: 1224 ctttcgactcaccttcatcggcgtacacgacgctcctctaccgc-tcatccagaggatga 1166
Query: 253 cacccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcga 312
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 -acccgtagcttcggtacctggtttgagccccgttacatcttccgcgcaggccgactcga 1107
Query: 313 ctagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgt 372
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1106 ctagtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgt 1047
Query: 373 ctaagccttcccacatc 389
|||||||||||||||||
Sbjct: 1046 ctaagccttcccacatc 1030
>emb|AJ306877.1|HEL306877 Halomonas elongata partial 23S rRNA gene, strain ATCC 33173
Length = 2910
Score = 393 bits (198), Expect = e-106
Identities = 335/377 (88%), Gaps = 4/377 (1%)
Strand = Plus / Minus
Query: 15 gaggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttaggga 74
||||||| |||||||| ||| |||| ||||||||||||| |||| ||||||||||||||
Sbjct: 1403 gaggtacgggaatattgacccgtttcccatcgactacgcctttcggcctcgccttagggg 1344
Query: 75 ccgactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagt 134
|||||| || |||| |||||| ||| | ||| || |||||||||| ||||| | ||||
Sbjct: 1343 ccgactcactctgctccgattagcgtcgaacagaaacccttggtcttccggcgggggagt 1284
Query: 135 ttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagc 194
||||||||| | || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1283 ttttcactccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcaagc 1224
Query: 195 ttctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaa--gatga 252
| || ||||||||||| ||| |||| ||||||||||||||| ||||| | |||||
Sbjct: 1223 ctttcgactcaccttcatcggcgtacacgacgctcctctaccgc-tcatccagaggatga 1165
Query: 253 cacccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcga 312
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 -acccgtagcttcggtacctggtttgagccccgttacatcttccgcgcaggccgactcga 1106
Query: 313 ctagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgt 372
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1105 ctagtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgt 1046
Query: 373 ctaagccttcccacatc 389
|||||||||||||||||
Sbjct: 1045 ctaagccttcccacatc 1029
>emb|AJ306880.1|HMA306880 Halomonas marina partial 23S rRNA gene, strain DSM 4741
Length = 2910
Score = 377 bits (190), Expect = e-102
Identities = 333/376 (88%), Gaps = 6/376 (1%)
Strand = Plus / Minus
Query: 17 ggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggacc 76
||||| |||||||||||| |||| ||||||||||||| |||| |||||||||||||| ||
Sbjct: 1400 ggtacgggaatattaacccgtttcccatcgactacgcgtttccgcctcgccttaggggcc 1341
Query: 77 gactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagttt 136
|||| || |||| |||||||||| | ||| ||||||||||||| ||||| | ||||||
Sbjct: 1340 gactcactctgctccgattaacgtagaacagaaaaccttggtcttccggcgggggagttt 1281
Query: 137 ttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 196
||||||| | || |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 1280 ttcactccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcagactt 1221
Query: 197 ctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatc---aaagatgac 253
||||| |||||||| |||||||| ||||||||||||||| ||||| || |||||
Sbjct: 1220 ctcaatccaccttcattggcttacacgacgctcctctaccgc-tcatccataaggatga- 1163
Query: 254 acccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgac 313
||||||||||||||| | || ||| |||||||||| ||||||||||||||||||||||||
Sbjct: 1162 acccgtagcttcggtacctgattt-agccccgttatatcttccgcgcaggccgactcgac 1104
Query: 314 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 373
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1103 tagtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtc 1044
Query: 374 taagccttcccacatc 389
| ||||||||||||||
Sbjct: 1043 tgagccttcccacatc 1028
>emb|X87289.1|PS23S5022 P.stutzeri 23S rRNA gene
Length = 2900
Score = 375 bits (189), Expect = e-101
Identities = 213/221 (96%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 1391 gtacgggaatattaacccgtttcccatcgactacgctcttcagcctcgccttagggaccg 1332
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1331 actcaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgcgagtttt 1272
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1271 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagccagcttc 1212
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgc 238
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1211 tcaactgaccttcacaggcttacagaacgctcctctaccgc 1171
Score = 254 bits (128), Expect = 6e-65
Identities = 134/136 (98%)
Strand = Plus / Minus
Query: 254 acccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgac 313
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 acccgtagcttcggtacctggtttgagccccgttacatcttccgcgcaggccgactcgac 1097
Query: 314 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 1037
Query: 374 taagccttcccacatc 389
||||||||||||||||
Sbjct: 1036 taagccttcccacatc 1021
>emb|AJ306874.1|HAQ306874 Halomonas aquamarina partial 23S rRNA gene, strain DSM 30161
Length = 2914
Score = 373 bits (188), Expect = e-100
Identities = 332/375 (88%), Gaps = 5/375 (1%)
Strand = Plus / Minus
Query: 17 ggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggacc 76
||||| |||||||| ||| |||| ||||||||||||| |||| || ||||||||||| ||
Sbjct: 1401 ggtacgggaatattgacccgtttcccatcgactacgcctttcggcttcgccttaggggcc 1342
Query: 77 gactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagttt 136
|||| || |||| |||||| ||| | ||| || |||||||||| ||||| | ||||||
Sbjct: 1341 gactcactctgctccgattagcgtcgaacagaaacccttggtcttccggcgagggagttt 1282
Query: 137 ttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 196
||||||| | || |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1281 ttcactccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcaagctt 1222
Query: 197 ctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaa--gatgaca 254
|||||| ||||||| |||||||| ||||||||||||||| ||||| | ||||| |
Sbjct: 1221 ctcaaccaaccttcatcggcttacacgacgctcctctaccgc-tcatccagaggatga-a 1164
Query: 255 cccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgact 314
|||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1163 cccgtagcttcggtacctggttt-agccccgttacatcttccgcgcaggccgactcgact 1105
Query: 315 agtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtct 374
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1104 agtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtct 1045
Query: 375 aagccttcccacatc 389
||||||||||||||
Sbjct: 1044 gagccttcccacatc 1030
>emb|AJ306873.1|CSA306873 Chromohalobacter salexigens partial 23S rRNA gene, strain DSM 3043
Length = 2908
Score = 373 bits (188), Expect = e-100
Identities = 331/375 (88%), Gaps = 4/375 (1%)
Strand = Plus / Minus
Query: 17 ggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggacc 76
||||| |||||||||||| |||| ||||||||||||| |||| |||||||||||||| ||
Sbjct: 1400 ggtacgggaatattaacccgtttcccatcgactacgcctttcggcctcgccttaggggcc 1341
Query: 77 gactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagttt 136
|||| || |||| ||||| |||| | ||| || |||||||||| ||||| | | | ||
Sbjct: 1340 gactcactctgctccgattgacgtcgaacagaaacccttggtcttccggcgggggcggtt 1281
Query: 137 ttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 196
||||| | | || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1280 ttcacgccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcaagcct 1221
Query: 197 ctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatca--aagatgaca 254
||| |||||||||| ||||| |||| ||||||||||||||| ||||| | |||||
Sbjct: 1220 ctcgactcaccttcgcaggcgtacacgacgctcctctaccgc-tcatcctgaggatgag- 1163
Query: 255 cccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgact 314
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 cccgtagcttcggcacctggtttgagccccgttacatcttccgcgcaggccgactcgact 1103
Query: 315 agtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtct 374
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1102 agtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtct 1043
Query: 375 aagccttcccacatc 389
|||||||||||||||
Sbjct: 1042 aagccttcccacatc 1028
>emb|AJ306871.1|CIS306871 Chromohalobacter israelensis partial 23S rRNA gene, strain DSM 6768
Length = 2909
Score = 373 bits (188), Expect = e-100
Identities = 331/375 (88%), Gaps = 4/375 (1%)
Strand = Plus / Minus
Query: 17 ggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggacc 76
||||| |||||||||||| |||| ||||||||||||| |||| |||||||||||||| ||
Sbjct: 1401 ggtacgggaatattaacccgtttcccatcgactacgcctttcggcctcgccttaggggcc 1342
Query: 77 gactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagttt 136
|||| || |||| ||||| |||| | ||| || |||||||||| ||||| | | | ||
Sbjct: 1341 gactcactctgctccgattgacgtcgaacagaaacccttggtcttccggcgggggcggtt 1282
Query: 137 ttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 196
||||| | | || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1281 ttcacgccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcaagcct 1222
Query: 197 ctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaa--gatgaca 254
||| |||||||||| ||||| |||| ||||||||||||||| ||||| | |||||
Sbjct: 1221 ctcgactcaccttcgcaggcgtacacgacgctcctctaccgc-tcatccagaggatgag- 1164
Query: 255 cccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgact 314
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 cccgtagcttcggcacctggtttgagccccgttacatcttccgcgcaggccgactcgact 1104
Query: 315 agtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtct 374
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1103 agtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtct 1044
Query: 375 aagccttcccacatc 389
|||||||||||||||
Sbjct: 1043 aagccttcccacatc 1029
>emb|AJ306870.1|CCA306870 Chromohalobacter canadensis partial 23S rRNA gene, strain DSM 6769
Length = 2910
Score = 373 bits (188), Expect = e-100
Identities = 331/375 (88%), Gaps = 4/375 (1%)
Strand = Plus / Minus
Query: 17 ggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggacc 76
||||| |||||||||||| |||| ||||||||||||| |||| |||||||||||||| ||
Sbjct: 1401 ggtacgggaatattaacccgtttcccatcgactacgcctttcggcctcgccttaggggcc 1342
Query: 77 gactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagttt 136
|||| || |||| ||||| |||| | ||| || |||||||||| ||||||||| | ||
Sbjct: 1341 gactcactctgctccgattgacgtcgaacagaaacccttggtcttccggcgtgcggggtt 1282
Query: 137 ttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 196
||||| |||||| |||||||||||||||||||||||||| ||||| ||||||| ||||
Sbjct: 1281 ttcacccgcattatcgttactcatgtcagcattcgcactcgtgatatctccagcgcgctt 1222
Query: 197 ctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatc--aaagatgaca 254
|||||| | ||||||||| |||||| ||||||||||||| | ||||| | |||||
Sbjct: 1221 ctcaacgccccttcacagacttacacgacgctcctctaccac-tcatccagaggatgagt 1163
Query: 255 cccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgact 314
| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 c-cgtagcttcggcacctggtttgagccccgttacatcttccgcgcaggccgactcgact 1104
Query: 315 agtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtct 374
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1103 agtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtct 1044
Query: 375 aagccttcccacatc 389
|||||||||||||||
Sbjct: 1043 aagccttcccacatc 1029
>emb|AJ306883.1|HPA306883 Halomonas pantelleriensis partial 23S rRNA gene, strain DSM 9661
Length = 2912
Score = 367 bits (185), Expect = 6e-99
Identities = 331/376 (88%), Gaps = 4/376 (1%)
Strand = Plus / Minus
Query: 16 aggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggac 75
|||||| |||||||| ||| |||| ||||||||||||| |||| |||||||||||||| |
Sbjct: 1403 aggtacgggaatattgacccgtttcccatcgactacgcctttcggcctcgccttaggggc 1344
Query: 76 cgactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtt 135
||||| || |||| ||||| | | | ||| || |||||||||| ||||| | |||||
Sbjct: 1343 cgactcactctgctctgattagcatcgaacagaaacccttggtcttccggcgggggagtt 1284
Query: 136 tttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagct 195
|||||||| | || |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1283 tttcactccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcagact 1224
Query: 196 tctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatc--aaagatgac 253
|||||| ||||||| |||||||| ||||||||||||||| ||||| || |||||
Sbjct: 1223 tctcaatctaccttcatcggcttacacgacgctcctctaccgc-tcatcctaaggatga- 1166
Query: 254 acccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgac 313
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 acccgtagcttcggtacctggtttgagccccgttacatcttccgcgcaggccgactcgac 1106
Query: 314 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 373
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1105 tagtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtc 1046
Query: 374 taagccttcccacatc 389
| ||||||||||||||
Sbjct: 1045 tgagccttcccacatc 1030
>emb|X87280.1|AC23S3000 A.calcoaceticus 23S rRNA gene
Length = 2903
Score = 365 bits (184), Expect = 2e-98
Identities = 323/368 (87%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 23 ggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccgactaa 82
|||||||||||| ||| ||||||||||||| |||| |||||||||||||| ||||| |
Sbjct: 1389 ggaatattaaccaatttcccatcgactacgcctttcggcctcgccttaggggtcgactca 1330
Query: 83 ccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttttcact 142
||| || |||||||||||| | |||| |||||||||||||||| || |||||||||
Sbjct: 1329 cccagccccgattaacgttggactggaacccttggtctttcggcgaacgggtttttcacc 1270
Query: 143 cgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaac 202
|| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1269 cgttttgtcgttactcacgtcagcattcgcacttctgatacctccagcatacttctcaat 1210
Query: 203 tcaccttcacaggcttacagaacgctcctctaccgcgtca-tcaaagatgacacccgtag 261
|||||||| ||||||||||||||||| ||||| | | | | ||| | | | ||| ||
Sbjct: 1209 acaccttcatcggcttacagaacgctcccctaccacttgacttaaaagtcaaatccgcag 1150
Query: 262 cttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagtgagc 321
|||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 cttcggcacatagttttagccccgttacatcttccgcgcaggccgactcgactagtgagc 1090
Query: 322 tattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaagcctt 381
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1089 tattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctatgcctt 1030
Query: 382 cccacatc 389
||||||||
Sbjct: 1029 cccacatc 1022
>emb|AJ306884.1|HSA306884 Halomonas salina partial 23S rRNA gene, strain DSM 5928
Length = 2908
Score = 359 bits (181), Expect = 1e-96
Identities = 328/373 (87%), Gaps = 3/373 (0%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||| |||||||| ||| |||| ||||||||||||| |||| |||||||||||||| |||
Sbjct: 1398 gtacgggaatattgacccgtttcccatcgactacgcctttcggcctcgccttaggggccg 1339
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||| || |||| |||||| ||| | ||| || |||||||||| ||||| | |||||
Sbjct: 1338 actcactctgctccgattagcgtcgaacagaaacccttggtcttccggcggggaggtttt 1279
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttc 197
|||| | | || |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1278 tcaccccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcaagcctc 1219
Query: 198 tcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaa-gatgacacc 256
|| |||||||||| ||| |||| |||||||||||||||| ||||| |||| ||||
Sbjct: 1218 tcgactcaccttcgtcggcgtacacgacgctcctctaccgcg-catcattcgatg-cacc 1161
Query: 257 cgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactag 316
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 cgtagcttcggtacctggtttgagccccgttacatcttccgcgcaggccgactcgactag 1101
Query: 317 tgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaa 376
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 1100 tgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtctga 1041
Query: 377 gccttcccacatc 389
|||||||||||||
Sbjct: 1040 gccttcccacatc 1028
>emb|AJ306885.1|HSU306885 Halomonas subglaciescola partial 23S rRNA gene, strain DSM 4683
Length = 2910
Score = 353 bits (178), Expect = 9e-95
Identities = 331/377 (87%), Gaps = 5/377 (1%)
Strand = Plus / Minus
Query: 15 gaggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttaggga 74
||||||| |||||||| ||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 1403 gaggtacgggaatattgacccgttttccatcgactacgcctttcggcctcgccttaggag 1344
Query: 75 ccgactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagt 134
|||||| || |||| ||||||| ||| | ||| || |||||||||| ||||| | | ||
Sbjct: 1343 ccgactcactctgcttcgattagcgtcgaacagaaacccttggtcttccggcgagggcgt 1284
Query: 135 ttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagc 194
||||||| | | || |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 1283 ttttcacgccctttatcgttactcatgtcagcattcgcactcgtgatacctccagcagac 1224
Query: 195 ttctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaa--gatga 252
||||||| |||||||| |||||||| ||||||||||||||| ||||| | |||||
Sbjct: 1223 ttctcaatccaccttcatcggcttacacgacgctcctctaccgc-tcatccataggatga 1165
Query: 253 cacccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcga 312
||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1164 -acccgtagcttcggtacctggttt-agccccgttacatcttccgcgcaggccgactcga 1107
Query: 313 ctagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgt 372
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1106 ctagtgagctattacgctttcttgaaaggatggctgcttctaagccaacctcctagctgt 1047
Query: 373 ctaagccttcccacatc 389
|| ||||||||||||||
Sbjct: 1046 ctgagccttcccacatc 1030
>gb|AF362021.1|AF362021 Acidithiobacillus thiooxidans strain 8930P 16S ribosomal RNA gene,
partial sequence; 16S-23S ribosomal RNA intergenic spacer
region, complete sequence; and 23S ribosomal RNA gene,
partial sequence
Length = 3677
Score = 349 bits (176), Expect = 1e-93
Identities = 321/368 (87%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 23 ggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccgactaa 82
|||||||||||| ||| ||||| |||||| | || ||||| |||||||| |||||| |
Sbjct: 3295 ggaatattaaccgatttcccatcagctacgcctctcggcctcaccttaggggccgactca 3236
Query: 83 ccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttttcact 142
||||||| |||| || | |||||||| |||||| ||| ||||| | | | |||||||
Sbjct: 3235 ccctgcgcagattgacttgacgcaggaacccttgggcttacggcgagggtggttttcaca 3176
Query: 143 cgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaac 202
| | || ||| |||||||||||||||||||||||| ||||||||||||| |||| ||||
Sbjct: 3175 ccctttatcgctactcatgtcagcattcgcacttcggatacctccagcacgctttccaac 3116
Query: 203 tcaccttcacaggcttacagaacgctcctctaccgcgtcatc-aaagatgacacccgtag 261
||||||||||||||||| ||||||||||||||||||| || ||||| ||||||| ||
Sbjct: 3115 gcaccttcacaggcttaccgaacgctcctctaccgcgtgttccaaagaacacacccgcag 3056
Query: 262 cttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagtgagc 321
||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 3055 cttcggtatatggcttgagccccggtaaatcttccgcgcaggccgactcgactagtgagc 2996
Query: 322 tattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaagcctt 381
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2995 tattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctatgcctt 2936
Query: 382 cccacatc 389
||||||||
Sbjct: 2935 cccacatc 2928
>emb|AJ306886.1|HVA306886 Halomonas variabilis partial 23S rRNA gene, strain DSM 3051
Length = 2912
Score = 349 bits (176), Expect = 1e-93
Identities = 327/375 (87%), Gaps = 3/375 (0%)
Strand = Plus / Minus
Query: 17 ggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggacc 76
||||| |||||||| ||| |||| ||||||||||||| |||| |||||||||||||| ||
Sbjct: 1402 ggtacgggaatattgacccgtttcccatcgactacgcctttcggcctcgccttaggggcc 1343
Query: 77 gactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagttt 136
|||| || |||| |||||| ||| | ||| || |||||||||| ||||| | ||||||
Sbjct: 1342 gactcactctgctccgattagcgtcgaacagaaacccttggtcttccggcgagggagttt 1283
Query: 137 ttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 196
||||||| | || |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 1282 ttcactccctttatcgttactcatgtcagcattcgcactcgtgatacctccagcagactt 1223
Query: 197 ctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaag--atgaca 254
||||| |||||||| ||| |||| |||||||||||||||| || || | |||
Sbjct: 1222 ctcaatccaccttcattggcgtacacgacgctcctctaccgcgagttcctagggaacaca 1163
Query: 255 cccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgact 314
|||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1162 cccgtagcttcggtacctggttt-agccccgttacatcttccgcgcaggccgactcgact 1104
Query: 315 agtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtct 374
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1103 agtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtct 1044
Query: 375 aagccttcccacatc 389
||||||||||||||
Sbjct: 1043 gagccttcccacatc 1029
>emb|AJ306881.1|HME306881 Halomonas meridiana partial 23S rRNA gene, strain DSM 5425
Length = 2914
Score = 349 bits (176), Expect = 1e-93
Identities = 329/375 (87%), Gaps = 5/375 (1%)
Strand = Plus / Minus
Query: 17 ggtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggacc 76
||||| |||||||| ||| |||| ||||||||||||| |||| || |||||| |||| ||
Sbjct: 1401 ggtacgggaatattgacccgtttcccatcgactacgcctttcggcttcgcctaaggggcc 1342
Query: 77 gactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagttt 136
|||| || | || |||||| ||| | ||| || |||||||||| ||||| | ||||||
Sbjct: 1341 gactcactccgctccgattagcgtcgaacagaaacccttggtcttccggcgagggagttt 1282
Query: 137 ttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 196
||||||| | || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1281 ttcactccccttatcgttactcatgtcagcattcgcactcgtgatacctccagcaagcct 1222
Query: 197 ctcaactcaccttcacaggcttacagaacgctcctctaccgcgtcatcaaa--gatgaca 254
|||||| ||||||| |||||||| ||||||||||||||| ||||| | ||||| |
Sbjct: 1221 ctcaaccaaccttcatcggcttacacgacgctcctctaccgc-tcatccagaggatga-a 1164
Query: 255 cccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgact 314
|||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1163 cccgtagcttcggtacctggttt-agccccgttacatcttccgcgcaggccgactcgact 1105
Query: 315 agtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtct 374
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1104 agtgagctattacgctttctttaaaggatggctgcttctaagccaacctcctagctgtct 1045
Query: 375 aagccttcccacatc 389
||||||||||||||
Sbjct: 1044 gagccttcccacatc 1030
>gb|U65012.1|PSU65012 Pseudomonas stutzeri 16S rRNA, 23S rRNA, 5S rRNA, tRNA-Ile, and
tRNA-Ala genes, complete sequences
Length = 5785
Score = 331 bits (167), Expect = 3e-88
Identities = 211/223 (94%), Gaps = 2/223 (0%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacct-gttttccatcgacta-cgcttttcagcctcgccttagggac 75
|||| |||||||||||| |||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 3904 gtacgggaatattaaccccgtttcccatcgactaacgctcttcagcctcgccttagggac 3845
Query: 76 cgactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtt 135
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3844 cgactcaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgcgagtt 3785
Query: 136 tttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagct 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 3784 tttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagccaact 3725
Query: 196 tctcaactcaccttcacaggcttacagaacgctcctctaccgc 238
|||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 3724 tctcaattgaccttcacaggcttacagaacgctcctctaccgc 3682
Score = 254 bits (128), Expect = 6e-65
Identities = 134/136 (98%)
Strand = Plus / Minus
Query: 254 acccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgac 313
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3667 acccgtagcttcggtacctggtttgagccccgttacatcttccgcgcaggccgactcgac 3608
Query: 314 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3607 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 3548
Query: 374 taagccttcccacatc 389
||||||||||||||||
Sbjct: 3547 taagccttcccacatc 3532
>gb|L03788.1|PSERRNAPM Pseudomonas perfectomarina 23S ribosomal RNA subunit gene
Length = 2884
Score = 331 bits (167), Expect = 3e-88
Identities = 211/223 (94%), Gaps = 2/223 (0%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacct-gttttccatcgacta-cgcttttcagcctcgccttagggac 75
|||| |||||||||||| |||| |||||||||| |||| ||||||||||||||||||||
Sbjct: 1395 gtacgggaatattaaccccgtttcccatcgactaacgctcttcagcctcgccttagggac 1336
Query: 76 cgactaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtt 135
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1335 cgactcaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgcgagtt 1276
Query: 136 tttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagct 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 1275 tttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagccaact 1216
Query: 196 tctcaactcaccttcacaggcttacagaacgctcctctaccgc 238
|||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1215 tctcaattgaccttcacaggcttacagaacgctcctctaccgc 1173
Score = 254 bits (128), Expect = 6e-65
Identities = 134/136 (98%)
Strand = Plus / Minus
Query: 254 acccgtagcttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgac 313
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 acccgtagcttcggtacctggtttgagccccgttacatcttccgcgcaggccgactcgac 1099
Query: 314 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 tagtgagctattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtc 1039
Query: 374 taagccttcccacatc 389
||||||||||||||||
Sbjct: 1038 taagccttcccacatc 1023
>gb|M26757.1|PSERGGA P.aeruginosa 23S rRNA gene
Length = 354
Score = 291 bits (147), Expect = 3e-76
Identities = 171/179 (95%)
Strand = Plus / Minus
Query: 18 gtacaggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccg 77
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 179 gtacaggaatattaacctgtttcccatcgactacgcttttcagcctcgccttaggaaccg 120
Query: 78 actaaccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttt 137
||||||||||||||||||||||||||||||||| |||||||||||||||||| | | |||
Sbjct: 119 actaaccctgcgtcgattaacgttgcgcaggaacccttggtctttcggcgtgggtgcttt 60
Query: 138 tcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 196
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tcacacccattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagctt 1
>emb|X68323.1|BPG23S B.pertussis gene for 23S ribosomal RNA
Length = 2864
Score = 281 bits (142), Expect = 3e-73
Identities = 312/365 (85%), Gaps = 4/365 (1%)
Strand = Plus / Minus
Query: 23 ggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccgactaa 82
|||||||||||| | || ||||| |||||| | || |||||||||||||| |||||| |
Sbjct: 1384 ggaatattaaccagcttcccatcagctacgcatctctgcctcgccttaggggccgactca 1325
Query: 83 ccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttttcact 142
||||||| |||| |||||||||||||||||||||| ||| ||||| | | | |||||||
Sbjct: 1324 ccctgcgccgatgaacgttgcgcaggaaaccttggacttacggcgagggggcttttcacc 1265
Query: 143 cgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaac 202
| | || ||| |||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 1264 ccctttatcgctactcatgtcagcattcgcacttctgatacctccagcagcctttacaag 1205
Query: 203 tcaccttcacaggcttacagaacgctcctctaccgcgtca-tcaaagatgacacccgtag 261
||||||| |||||||||||||||||| ||||||| || | |||| ||||||| ||
Sbjct: 1204 ccaccttcgcaggcttacagaacgctctcctaccgctgcactaaaagtgcacacccgcag 1145
Query: 262 cttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagtgagc 321
||||||| || | || ||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 1144 cttcggtttatcgctt-agc--cgttacatcttccgcgcaggacgactcgatcagtgagc 1088
Query: 322 tattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaagcctt 381
||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1087 tattacgctttctttaaagggtggctgcttctaagccaacctcctgactgtctatgcctt 1028
Query: 382 cccac 386
|||||
Sbjct: 1027 cccac 1023
>emb|X68368.1|BP23SRRA B.parapertussis gene for 23S ribosomal RNA
Length = 2865
Score = 281 bits (142), Expect = 3e-73
Identities = 312/365 (85%), Gaps = 4/365 (1%)
Strand = Plus / Minus
Query: 23 ggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccgactaa 82
|||||||||||| | || ||||| |||||| | || |||||||||||||| |||||| |
Sbjct: 1384 ggaatattaaccagcttcccatcagctacgcatctctgcctcgccttaggggccgactca 1325
Query: 83 ccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttttcact 142
||||||| |||| |||||||||||||||||||||| ||| ||||| | | | |||||||
Sbjct: 1324 ccctgcgccgatgaacgttgcgcaggaaaccttggacttacggcgagggggcttttcacc 1265
Query: 143 cgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaac 202
| | || ||| |||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 1264 ccctttatcgctactcatgtcagcattcgcacttctgatacctccagcagcctttacaag 1205
Query: 203 tcaccttcacaggcttacagaacgctcctctaccgcgtca-tcaaagatgacacccgtag 261
||||||| |||||||||||||||||| ||||||| || | |||| ||||||| ||
Sbjct: 1204 ccaccttcgcaggcttacagaacgctctcctaccgctgcactaaaagtgcacacccgcag 1145
Query: 262 cttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagtgagc 321
||||||| || | || ||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 1144 cttcggtttatcgctt-agc--cgttacatcttccgcgcaggacgactcgatcagtgagc 1088
Query: 322 tattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaagcctt 381
||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1087 tattacgctttctttaaagggtggctgcttctaagccaacctcctgactgtctatgcctt 1028
Query: 382 cccac 386
|||||
Sbjct: 1027 cccac 1023
>emb|X70371.1|BB23SRRA B.bronchiseptica gene for 23S rRNA
Length = 2865
Score = 274 bits (138), Expect = 7e-71
Identities = 311/365 (85%), Gaps = 4/365 (1%)
Strand = Plus / Minus
Query: 23 ggaatattaacctgttttccatcgactacgcttttcagcctcgccttagggaccgactaa 82
|||||||||||| | || ||||| |||||| | || |||||||||||||| |||||| |
Sbjct: 1383 ggaatattaaccagcttcccatcagctacgcatctctgcctcgccttaggggccgactca 1324
Query: 83 ccctgcgtcgattaacgttgcgcaggaaaccttggtctttcggcgtgcgagtttttcact 142
||||||| |||| |||||||||||||||||||||| ||| ||||| | | | |||||||
Sbjct: 1323 ccctgcgccgatgaacgttgcgcaggaaaccttggacttacggcgagggggcttttcacc 1264
Query: 143 cgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaac 202
| | || | | |||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 1263 ccctttatggctactcatgtcagcattcgcacttctgatacctccagcagcctttacaag 1204
Query: 203 tcaccttcacaggcttacagaacgctcctctaccgcgtca-tcaaagatgacacccgtag 261
||||||| |||||||||||||||||| ||||||| || | |||| ||||||| ||
Sbjct: 1203 ccaccttcgcaggcttacagaacgctctcctaccgctgcactaaaagtgcacacccgcag 1144
Query: 262 cttcggtgcatggtttgagccccgttacatcttccgcgcaggccgactcgactagtgagc 321
||||||| || | || ||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 1143 cttcggtttatcgctt-agc--cgttacatcttccgcgcaggacgactcgatcagtgagc 1087
Query: 322 tattacgctttctttaaagggtggctgcttctaagccaacctcctagctgtctaagcctt 381
||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1086 tattacgctttctttaaagggtggctgcttctaagccaacctcctgactgtctatgcctt 1027
Query: 382 cccac 386
|||||
Sbjct: 1026 cccac 1022
>emb|AJ414159.1|AJ414159 Yersinia pestis strain CO92 complete genome; segment 19/20
Length = 199050
Score = 260 bits (131), Expect = 1e-66
Identities = 197/219 (89%)
Strand = Plus / Plus