The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.3 [Apr-24-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Fgr-S3_1_G10_T7.seq Fgr-S3_1_G10_T7 LENGTH:226bp ;
DIRECTION:5 ; CLONE:Fgr-S3_1_G10 ; CLONELIB: n/a
(226 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
922,381 sequences; 289,601,141 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_037029.1| (NM_012897) adrenergic receptor kinase, be... 30 4.5
pir||A41615 beta-adrenergic-receptor kinase (EC 2.7.1.126) ... 30 5.9
ref|NP_524922.1| (NM_080183) G protein-coupled receptor kin... 30 5.9
gb|AAF87749.1|AF278540_1 (AF278540) bacteriocin boticin B [... 30 5.9
gb|AAF05109.1|AF157046_1 (AF157046) G protein-coupled recep... 30 5.9
ref|NP_612734.1| (NC_003521) tegument protein UL103 [chimpa... 30 5.9
pir||JC1469 beta-adrenergic-receptor kinase (EC 2.7.1.126) ... 30 5.9
ref|NP_005151.1| (NM_005160) beta adrenergic receptor kinas... 30 5.9
emb|CAB45657.1| (AL022329) bK407F11.2 (adrenergic, beta, re... 30 5.9
sp|P26818|ARK2_BOVIN Beta-adrenergic receptor kinase 2 (Bet... 30 5.9
ref|XP_037826.1| (XM_037826) beta adrenergic receptor kinas... 30 5.9
>ref|NP_037029.1| (NM_012897) adrenergic receptor kinase, beta 2 (G-protein-linked
receptor kinase) [Rattus norvegicus]
sp|P26819|ARK2_RAT Beta-adrenergic receptor kinase 2 (Beta-ARK-2) (G-protein coupled
receptor kinase 3)
pir||I73628 beta-adrenergic-receptor kinase (EC 2.7.1.126) 2 - rat
gb|AAA40803.1| (M87855) beta-adrenergic receptor kinase 2 [Rattus norvegicus]
Length = 688
Score = 30.4 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 253 FIVCMTYAFHTPDKLCFILDLMNGGDMHYHLSQHG 287
>pir||A41615 beta-adrenergic-receptor kinase (EC 2.7.1.126) 1 - fruit fly
(Drosophila melanogaster)
Length = 700
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 254 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG 288
>ref|NP_524922.1| (NM_080183) G protein-coupled receptor kinase 1 [Drosophila
melanogaster]
sp|P32865|GPK1_DROME G protein-coupled receptor kinase 1
gb|AAA28588.1| (M80493) G protein-coupled receptor kinase [Drosophila
melanogaster]
Length = 700
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 254 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG 288
>gb|AAF87749.1|AF278540_1 (AF278540) bacteriocin boticin B [Clostridium botulinum]
Length = 50
Score = 30.0 bits (66), Expect = 5.9
Identities = 16/35 (45%), Positives = 21/35 (59%)
Frame = -3
Query: 158 MQKTVSVSSYLGSIRVIDFVCLGFMVGGAACFS*C 54
MQK +S+ LG V +FV L + GGAA F+ C
Sbjct: 1 MQKPEIISADLGLCAVNEFVALAAIPGGAATFAVC 35
>gb|AAF05109.1|AF157046_1 (AF157046) G protein-coupled receptor kinase type 2 [Homarus
americanus]
Length = 690
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 254 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG 288
>ref|NP_612734.1| (NC_003521) tegument protein UL103 [chimpanzee cytomegalovirus]
gb|AAM00740.1|AF480884_92 (AF480884) tegument protein UL103 [chimpanzee cytomegalovirus]
Length = 247
Score = 30.0 bits (66), Expect = 5.9
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 200 LCTLVSCVSCCGIFMQKTVSVSSYLGSIRVIDFVCLGFMVGGAACFS*CLAVYL 39
LCT++SCV C + Q + SYL + V D G ++ +A C A+YL
Sbjct: 105 LCTILSCVENCNLSRQCLFDLLSYLRMMNVRD--SFGKLLQHSARRLICSALYL 156
>pir||JC1469 beta-adrenergic-receptor kinase (EC 2.7.1.126) 2 - human
Length = 688
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 253 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG 287
>ref|NP_005151.1| (NM_005160) beta adrenergic receptor kinase 2 [Homo sapiens]
sp|P35626|ARK2_HUMAN Beta-adrenergic receptor kinase 2 (Beta-ARK-2) (G-protein coupled
receptor kinase 3)
emb|CAA48870.1| (X69117) beta-adrenergic kinase 2 [Homo sapiens]
Length = 688
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 253 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG 287
>emb|CAB45657.1| (AL022329) bK407F11.2 (adrenergic, beta, receptor kinase 2) [Homo
sapiens]
Length = 688
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 253 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG 287
>sp|P26818|ARK2_BOVIN Beta-adrenergic receptor kinase 2 (Beta-ARK-2) (G-protein coupled
receptor kinase 3)
pir||A39336 beta-adrenergic-receptor kinase (EC 2.7.1.126) 2 - bovine
gb|AAA30406.1| (M73216) beta-adrenergic receptor kinase 2 [Bos taurus]
Length = 688
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 253 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG 287
>ref|XP_037826.1| (XM_037826) beta adrenergic receptor kinase 2 [Homo sapiens]
Length = 646
Score = 30.0 bits (66), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 186 FLCIMLWDFHAEDGLCFILSRFNSSNRFCLLGFHG 82
F+ M + FH D LCFIL N + L HG
Sbjct: 253 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG 287
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
Posted date: May 11, 2002 4:54 AM
Number of letters in database: 289,601,141
Number of sequences in database: 922,381
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,717,935
Number of Sequences: 922381
Number of extensions: 2355133
Number of successful extensions: 6191
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6191
length of database: 289,601,141
effective HSP length: 50
effective length of database: 243,482,091
effective search space used: 5843570184
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)