Score E
Sequences producing significant alignments: (bits) Value
sp|Q10157|RL11_SCHPO 60S RIBOSOMAL PROTEIN L11 >gi|7490009|... 260 1e-68
pir||T29860 hypothetical protein F07D10.1 - Caenorhabditis ... 259 2e-68
ref|NP_015427.1| Ribosomal protein L11A (L16A) (rp39A) (YL2... 258 6e-68
ref|NP_011599.1| 60S ribosomal protein L11B (L16B) (rp39B) ... 258 6e-68
emb|CAA25515.1| (X01029) ribosomal protein L16 [Saccharomyc... 256 1e-67
sp|Q94300|RL11_CAEEL PROBABLE 60S RIBOSOMAL PROTEIN L11 >gi... 256 2e-67
gb|AAF13719.1|AF201080_1 (AF201080) ribosomal protein L11 [... 249 2e-65
ref|NP_080195.1| RIKEN cDNA 2010203J19 gene [Mus musculus] ... 247 8e-65
emb|CAB40967.1| (AJ238271) ribosomal protein L11 [Oryzias l... 246 1e-64
dbj|BAB29059.1| (AK013923) putative [Mus musculus] 244 7e-64
emb|CAC12883.1| (AJ295006) ribosomal protein L11-like [Nico... 244 9e-64
dbj|BAA92964.1| (AP001551) ESTs D15590(C0900),D48950(S15542... 243 2e-63
gb|AAD20460.2| (AF101385) ribosomal protein L11 [Homo sapiens] 243 2e-63
ref|XP_001555.3| ribosomal protein L11 [Homo sapiens] 242 3e-63
gb|AAF57560.1| (AE003796) RpL11 gene product [Drosophila me... 242 3e-63
sp|P46287|RL11_MEDSA 60S RIBOSOMAL PROTEIN L11 (L5) >gi|541... 240 1e-62
pir||T49153 ribosomal protein L11-like - Arabidopsis thalia... 239 2e-62
sp|P42795|R111_ARATH 60S RIBOSOMAL PROTEIN L11A (L16A) >gi|... 238 4e-62
sp|P42794|RL11_ARATH 60S RIBOSOMAL PROTEIN L11 (L16) >gi|62... 238 5e-62
ref|NP_000966.1| ribosomal protein L11 [Homo sapiens] >gi|6... 238 5e-62
sp|P42796|R112_ARATH 60S RIBOSOMAL PROTEIN L11B (L16B) >gi|... 238 5e-62
sp|P46222|RL11_DROME 60S RIBOSOMAL PROTEIN L11 >gi|2119109|... 235 4e-61
sp|Q29205|RL11_PIG 60S RIBOSOMAL PROTEIN L11 228 4e-59
sp|P42922|RL11_LEICH 60S RIBOSOMAL PROTEIN L11 >gi|559581|g... 228 5e-59
sp|P48157|RL11_LEIMA 60S RIBOSOMAL PROTEIN L11 >gi|577833|g... 227 1e-58
sp|O22540|RL11_ORYSA 60S RIBOSOMAL PROTEIN L11 >gi|7440682|... 225 4e-58
gb|AAD21733.1| (AC006931) 60S ribosomal protein L11B [Arabi... 222 3e-57
gb|AAG13293.1|AF266173_1 (AF266173) 60S ribosomal protein L... 222 4e-57
sp|P24119|RL11_TETTH 60S RIBOSOMAL PROTEIN L11 (L21) >gi|84... 221 8e-57
sp|P50881|RL11_CHLRE 60S RIBOSOMAL PROTEIN L11 >gi|7440679|... 216 2e-55
ref|NP_113325.1| 60S ribosomal protein L11B [Guillardia the... 200 1e-50
sp|Q94793|RL11_TOXCA 60S RIBOSOMAL PROTEIN L11 >gi|1498473|... 193 2e-48
dbj|BAA12249.1| (D84173) ribosomal protein L11 [Paramecium ... 182 3e-45
sp|Q9UX93|RL5_SULSO 50S RIBOSOMAL PROTEIN L5P >gi|6015772|e... 145 6e-34
sp|O59431|RL5_PYRHO 50S RIBOSOMAL PROTEIN L5P >gi|7440674|p... 142 4e-33
ref|NP_070737.1| LSU ribosomal protein L5P (rpl5P) [Archaeo... 141 8e-33
ref|NP_126019.1| LSU ribosomal protein L5P [Pyrococcus abys... 140 2e-32
sp|P54040|RL5_METJA 50S RIBOSOMAL PROTEIN L5P >gi|2119107|p... 133 2e-30
sp|Q9YF87|RL5_AERPE 50S RIBOSOMAL PROTEIN L5P >gi|7440677|p... 132 3e-30
sp|P14029|RL5_METVA 50S RIBOSOMAL PROTEIN L5P >gi|71105|pir... 131 7e-30
sp|O26124|RL5_METTH 50S RIBOSOMAL PROTEIN L5P >gi|7440673|p... 131 7e-30
sp|P41202|RL5_SULAC 50S RIBOSOMAL PROTEIN L5P >gi|243187|gb... 125 6e-28
sp|P16168|RL11_DICDI 60S RIBOSOMAL PROTEIN L11 (L5) (VEGETA... 124 1e-27
ref|NP_110857.1| 50S ribosomal protein L5 [Thermoplasma vol... 121 7e-27
sp|Q56231|RL5_THEAC 50S RIBOSOMAL PROTEIN L5P >gi|7484228|p... 117 1e-25
sp|P50558|RL5_HALN1 50S RIBOSOMAL PROTEIN L5P (HSAL5) >gi|1... 105 4e-22
sp|P14124|RL5_HALMA 50S RIBOSOMAL PROTEIN L5P (HMAL5) (HL13... 104 9e-22
pdb|1FFK|D Chain D, Crystal Structure Of The Large Ribosoma... 104 9e-22
gb|AAF78516.1|AF195217_1 (AF195217) ribosomal protein L16 [... 91 1e-17
dbj|BAB29449.1| (AK014593) putative [Mus musculus] 88 8e-17
gb|AAK23241.1| (AE005801) ribosomal protein L5 [Caulobacter... 70 2e-11
ref|NP_102132.1| 50S ribosomal protein L5 [Mesorhizobium lo... 67 2e-10
sp|Q9ZCR7|RL5_RICPR 50S RIBOSOMAL PROTEIN L5 >gi|7440671|pi... 67 3e-10
sp|O67568|RL5_AQUAE 50S RIBOSOMAL PROTEIN L5 >gi|7440663|pi... 66 4e-10
sp|Q9ZI40|RL5_AQUPY 50S RIBOSOMAL PROTEIN L5 64 1e-09
sp|P46178|RL5_BUCAK 50S RIBOSOMAL PROTEIN L5 >gi|632227|pir... 64 1e-09
sp|P10136|RL5_MYCCA 50S RIBOSOMAL PROTEIN L5 >gi|71101|pir|... 64 1e-09
gb|AAD08795.1| (AF040101) ribosomal protein L5 [Aquifex pyr... 64 1e-09
sp|P02389|RL5_ECOLI 50S RIBOSOMAL PROTEIN L5 >gi|7428671|pi... 64 2e-09
pir||B72727 hypothetical protein APE0355 - Aeropyrum pernix... 64 2e-09
dbj|BAA25831.1| (AB007171) ribosomal protein L11 [Homo sapi... 63 4e-09
dbj|BAB43330.1| (AP003136) 50S ribosomal protein L5 [Staphy... 62 5e-09
pir||D82718 50S ribosomal protein L5 XF1164 [imported] - Xy... 62 6e-09
emb|CAA79789.1| (Z21677) ribosomal protein L5 [Thermotoga m... 61 1e-08
sp|P38517|RL5_THEMA 50S RIBOSOMAL PROTEIN L5 >gi|7440672|pi... 61 1e-08
pir||S40200 ribosomal protein L5 - Thermotoga maritima 61 1e-08
sp|P08895|RL5_BACST 50S RIBOSOMAL PROTEIN L5 >gi|71100|pir|... 61 1e-08
sp|Q9Z9K2|RL5_BACHD 50S RIBOSOMAL PROTEIN L5 >gi|11276701|p... 60 2e-08
sp|O52344|RL5_MYCGA 50S RIBOSOMAL PROTEIN L5 >gi|2766515|gb... 60 3e-08
sp|P12877|RL5_BACSU 50S RIBOSOMAL PROTEIN L5 (BL6) >gi|7109... 60 3e-08
sp|P57579|RL5_BUCAI 50S RIBOSOMAL PROTEIN L5 >gi|10039171|d... 59 4e-08
pir||B82058 ribosomal protein L5 VC2584 [imported] - Vibrio... 59 4e-08
emb|CAB82082.1| (AL161803) 50S ribosomal protein L5 [Strept... 59 5e-08
sp|P44346|RL5_HAEIN 50S RIBOSOMAL PROTEIN L5 >gi|1075256|pi... 59 5e-08
gb|AAK03487.1| (AE006177) RpL5 [Pasteurella multocida] 59 5e-08
gb|AAK33194.1| (AE006478) 50S ribosomal protein L5 [Strepto... 58 9e-08
gb|AAK06185.1|AE006437_15 (AE006437) 50S ribosomal protein ... 57 2e-07
sp|P33098|RL5_MICLU 50S RIBOSOMAL PROTEIN L5 >gi|322075|pir... 57 3e-07
pir||T01713 ribosomal protein L5, organellar - Arabidopsis ... 57 3e-07
sp|O51443|RL5_BORBU 50S RIBOSOMAL PROTEIN L5 >gi|7440667|pi... 56 5e-07
ref|NP_109865.1| ribosomal protein L5 [Mycoplasma pneumonia... 55 6e-07
ref|NP_041920.1| 50S ribosomal protein L5 [Euglena gracilis... 55 8e-07
sp|Q9XD24|RL5_LEPIN 50S RIBOSOMAL PROTEIN L5 >gi|5163216|gb... 55 8e-07
ref|NP_072826.1| ribosomal protein L5 (rpL5) [Mycoplasma ge... 54 1e-06
ref|NP_078077.1| ribosomal protein L5 [Ureaplasma urealytic... 54 2e-06
ref|NP_050781.1| ribosomal protein L5 [Guillardia theta] >g... 54 2e-06
sp|Q9ZJS4|RL5_HELPJ 50S RIBOSOMAL PROTEIN L5 >gi|7440680|pi... 53 3e-06
sp|P56033|RL5_HELPY 50S RIBOSOMAL PROTEIN L5 >gi|7440666|pi... 53 4e-06
sp|P24315|RL5_THETH 50S RIBOSOMAL PROTEIN L5 >gi|94726|pir|... 52 5e-06
pir||C75535 ribosomal protein L5 - Deinococcus radiodurans ... 52 9e-06
ref|NP_038365.1| ribosomal protein L5 [Mesostigma viride] >... 52 9e-06
pir||C81267 50S ribosomal protein L5 Cj1695c [imported] - C... 52 9e-06
sp|O24701|RL5_SYNP6 50S RIBOSOMAL PROTEIN L5 >gi|2446902|db... 51 1e-05
sp|P95064|RL5_MYCTU 50S RIBOSOMAL PROTEIN L5 >gi|7440662|pi... 51 1e-05
ref|NP_043604.1| 50S ribosomal protein L5 [Odontella sinens... 50 3e-05
emb|CAA34548.1| (X16548) ribosomal protein L5 [Cyanophora p... 49 4e-05
ref|NP_050822.1| ribosomal protein L5 [Nephroselmis olivace... 49 6e-05
ref|NP_043192.1| ribosomal protein L5 [Cyanophora paradoxa]... 49 6e-05
sp|O32995|RL5_MYCLE 50S RIBOSOMAL PROTEIN L5 >gi|11276702|p... 49 7e-05
ref|NP_044764.1| ribosomal protein L5 [Reclinomonas america... 48 1e-04
gb|AAC64970.1| (AF095708) 50S ribosomal protein L5 [Oryza s... 48 1e-04
gb|AAD33268.1|AF126059_9 (AF126059) RpL5 [Streptococcus pne... 48 1e-04
gb|AAF64313.1|AF250923_1 (AF250923) plastid ribosomal prote... 45 0.001
sp|Q9Z7R9|RL5_CHLPN 50S RIBOSOMAL PROTEIN L5 >gi|7440683|pi... 44 0.001
ref|NP_045175.1| unknown; 50S ribosomal protein L5 [Cyanidi... 43 0.003
ref|NP_066313.1| ribosomal protein L5 [Malawimonas jakobifo... 42 0.009
sp|Q9PJM6|RL5_CHLMU 50S RIBOSOMAL PROTEIN L5 >gi|11276703|p... 40 0.034
ref|NP_042260.1| ribosomal protein L5 [Prototheca wickerham... 39 0.045
pir||F42645 ribosomal protein L5 - Chlamydia trachomatis >g... 39 0.077
gb|AAG23666.1|AF288091_11 (AF288091) ribosomal protein L5 [... 36 0.38
gb|AAF40466.1|AC004809_24 (AC004809) F13M7.17 [Arabidopsis ... 35 1.1
ref|NP_111333.1| Predicted helicase [Thermoplasma volcanium... 34 1.4
sp|Q9YCR4|SAT_AERPE SULFATE ADENYLYLTRANSFERASE (SULFATE AD... 33 4.2
sp|O31498|DNLJ_BACSU DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE SY... 33 4.2
dbj|BAB31762.1| (AK019498) putative [Mus musculus] 32 7.2
sp|Q62909|KRP2_RAT KINESIN-RELATED PROTEIN 2 >gi|7441390|pi... 32 9.4
prf||1012293A insulin-like growth factor II precursor [Ratt... 32 9.4
>sp|Q10157|RL11_SCHPO 60S RIBOSOMAL PROTEIN L11
pir||T38395 ribosomal protein L11 - fission yeast (Schizosaccharomyces pombe)
pir||T39733 60s ribosomal protein L11 - fission yeast (Schizosaccharomyces
pombe)
emb|CAA93230.1| (Z69240) 60s ribosomal protein L11 [Schizosaccharomyces pombe]
dbj|BAA31552.1| (AB016005) ribosomal protein L11 homolog [Schizosaccharomyces
pombe]
emb|CAB52808.1| (AL109846) 60s ribosomal protein L11 [Schizosaccharomyces pombe]
Length = 174
Score = 260 bits (664), Expect = 1e-68
Identities = 125/170 (73%), Positives = 142/170 (83%)
Frame = +3
Query: 96 SEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRR 275
+EKA NPM+EL+I KLVLNIS+GESGDRLTRAAKVLEQLSGQTPV+SKARYT+R FGIRR
Sbjct: 2 AEKAQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRR 61
Query: 276 NEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIG 455
NEKIA HVTVRGPKAEEILERGLKVKEYEL+KRNFS TGNFGFGI EHIDLGIKYDPSIG
Sbjct: 62 NEKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIG 121
Query: 456 IYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
IYGMDFY M + ++G +H+I E+T+ WFK ++D +V
Sbjct: 122 IYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVV 171
>pir||T29860 hypothetical protein F07D10.1 - Caenorhabditis elegans
gb|AAA83599.1| (U42845) coded for by C. elegans cDNA yk63a8.5; coded for by C.
elegans cDNA yk83a12.5; coded for by C. elegans cDNA
yk74b10.5; coded for by C. elegans cDNA yk64a6.5; coded
for by C. elegans cDNA yk108g8.5; coded for by C.
elegans cDNA yk90b10.5; coded>
Length = 196
Score = 259 bits (663), Expect = 2e-68
Identities = 125/169 (73%), Positives = 142/169 (83%)
Frame = +3
Query: 99 EKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRN 278
+KA N MRELKIQKL LNI VGESGDRLTRAAKVLEQL+GQTPV+SKARYTVRTFGIRRN
Sbjct: 13 KKARNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRN 72
Query: 279 EKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGI 458
EKIAVH TVRGPKAEEILE+GLKVKEYEL K NFS+TGNFGFG+ EHIDLGIKYDPSIGI
Sbjct: 73 EKIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSDTGNFGFGVQEHIDLGIKYDPSIGI 132
Query: 459 YGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
YGMDFY + ++G SHR++REE++KWF+ ++DGI+
Sbjct: 133 YGMDFYVVLDRAGRRIAKRRRAPGRVGPSHRVEREESIKWFQQKYDGII 181
>ref|NP_015427.1| Ribosomal protein L11A (L16A) (rp39A) (YL22); Rpl11ap
[Saccharomyces cerevisiae]
sp|P06380|RL11_YEAST 60S RIBOSOMAL PROTEIN L11 (L16) (YL16) (39A) (RP39)
pir||S59767 ribosomal protein L11.e.A, cytosolic - yeast (Saccharomyces
cerevisiae)
gb|AAB68072.1| (U32445) 60S ribosomal protein L16 (Swiss Prot. accession number
P06380) [Saccharomyces cerevisiae]
Length = 174
Score = 258 bits (658), Expect = 6e-68
Identities = 129/170 (75%), Positives = 140/170 (81%)
Frame = +3
Query: 96 SEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRR 275
S KA NPMR+LKI+KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVRTFGIRR
Sbjct: 2 SAKAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRR 61
Query: 276 NEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIG 455
NEKIAVHVTVRGPKAEEILERGLKVKEY+LR RNFS TGNFGFGI EHIDLGIKYDPSIG
Sbjct: 62 NEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIG 121
Query: 456 IYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
I+GMDFY M K +G SH+ +E+TV WFK ++D V
Sbjct: 122 IFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADV 171
>ref|NP_011599.1| 60S ribosomal protein L11B (L16B) (rp39B) (YL22); Rpl11bp
[Saccharomyces cerevisiae]
pir||R5BY16 ribosomal protein L11.e.B, cytosolic - yeast (Saccharomyces
cerevisiae)
emb|CAA97087.1| (Z72870) ORF YGR085c [Saccharomyces cerevisiae]
Length = 174
Score = 258 bits (658), Expect = 6e-68
Identities = 129/170 (75%), Positives = 140/170 (81%)
Frame = +3
Query: 96 SEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRR 275
S KA NPMR+LKI+KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVRTFGIRR
Sbjct: 2 STKAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRR 61
Query: 276 NEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIG 455
NEKIAVHVTVRGPKAEEILERGLKVKEY+LR RNFS TGNFGFGI EHIDLGIKYDPSIG
Sbjct: 62 NEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIG 121
Query: 456 IYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
I+GMDFY M K +G SH+ +E+TV WFK ++D V
Sbjct: 122 IFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADV 171
>emb|CAA25515.1| (X01029) ribosomal protein L16 [Saccharomyces pastorianus]
Length = 174
Score = 256 bits (655), Expect = 1e-67
Identities = 128/170 (75%), Positives = 140/170 (82%)
Frame = +3
Query: 96 SEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRR 275
S KA NPMR+LKI+KLVLNISVG+SGDRLTRA+KVLEQLSGQTPV SKARYTVRTFGIRR
Sbjct: 2 SAKAQNPMRDLKIEKLVLNISVGQSGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRR 61
Query: 276 NEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIG 455
NEKIAVHVTVRGPKAEEILERGLKVKEY+LR RNFS TGNFGFGI EHIDLGIKYDPSIG
Sbjct: 62 NEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIG 121
Query: 456 IYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
I+GMDFY M K +G SH+ +E+TV WFK ++D V
Sbjct: 122 IFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADV 171
>sp|Q94300|RL11_CAEEL PROBABLE 60S RIBOSOMAL PROTEIN L11
pir||T30978 hypothetical protein T22F3.4 - Caenorhabditis elegans
gb|AAB18306.1| (U64844) Contains similarity to Pfam domain: PF00673 (L5_C),
Score=194.1, E-value=7.3e-55, N=1 [Caenorhabditis
elegans]
Length = 196
Score = 256 bits (653), Expect = 2e-67
Identities = 124/169 (73%), Positives = 139/169 (81%)
Frame = +3
Query: 99 EKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRN 278
+K N MRELKIQKL LNI VGESGDRLTRAAKVLEQL+GQTPV+SKARYTVRTFGIRRN
Sbjct: 13 KKGRNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRN 72
Query: 279 EKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGI 458
EKIAVH TVRGPKAEEILE+GLKVKEYEL K NFS+TGNFGFG+ EHIDLGIKYDP IGI
Sbjct: 73 EKIAVHCTVRGPKAEEILEKGLKVKEYELFKENFSDTGNFGFGVQEHIDLGIKYDPGIGI 132
Query: 459 YGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
YGMDFY + +IG SHR+ +EET+KWF+ ++DGI+
Sbjct: 133 YGMDFYVVLNRNGVRVSKRRRAPGRIGPSHRVDKEETIKWFQQKYDGII 181
>gb|AAF13719.1|AF201080_1 (AF201080) ribosomal protein L11 [Schizosaccharomyces pombe]
Length = 166
Score = 249 bits (636), Expect = 2e-65
Identities = 120/163 (73%), Positives = 136/163 (82%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVH 296
M+EL+I KLVLNIS+GESGDRLTRAAKVLEQLSGQTPV+SKARYT+R FGIRRNEKIA H
Sbjct: 1 MKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNEKIACH 60
Query: 297 VTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMDFY 476
VTVRGPKAEEILERGLKVKEYEL+KRNFS TGNFGFGI EHIDLGIKYDPSIGIYGMDFY
Sbjct: 61 VTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGIYGMDFY 120
Query: 477 CCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
M + ++G +H+I E+T+ WFK ++D +V
Sbjct: 121 VVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVV 163
>ref|NP_080195.1| RIKEN cDNA 2010203J19 gene [Mus musculus]
sp|P39026|RL11_HUMAN 60S RIBOSOMAL PROTEIN L11
pir||R5RT11 ribosomal protein L11, cytosolic [validated] - rat
emb|CAA44072.1| (X62146) ribosomal protein L11 [Rattus rattus]
gb|AAC15856.1| (L05092) ribosomal protein L11 [Homo sapiens]
dbj|BAB22504.1| (AK002998) putative [Mus musculus]
dbj|BAB25660.1| (AK008422) putative [Mus musculus]
dbj|BAB27470.1| (AK011211) putative [Mus musculus]
dbj|BAB27850.1| (AK011800) putative [Mus musculus]
Length = 178
Score = 247 bits (631), Expect = 8e-65
Identities = 120/165 (72%), Positives = 137/165 (82%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPMREL+I+KL LNI VGESGDRLTRAAKVLEQL+GQTPV+SKARYTVR+FGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 69
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMD 470
VH TVRG KAEEILE+GLKV+EYELRK NFS+TGNFGFGI EHIDLGIKYDPSIGIYG+D
Sbjct: 70 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 129
Query: 471 FYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
FY + IGA HRI +EE ++WF+ ++DGI+
Sbjct: 130 FYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGII 174
>emb|CAB40967.1| (AJ238271) ribosomal protein L11 [Oryzias latipes]
Length = 177
Score = 246 bits (629), Expect = 1e-64
Identities = 121/171 (70%), Positives = 140/171 (81%)
Frame = +3
Query: 87 AMASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
A EK NPM+EL+I+KL LNI VGESGDRLTRAAKVLEQL+GQTPV+SKARYTVR+FG
Sbjct: 1 AEQGEKKENPMKELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIAVH TVRG KAEEILE+GLKV+EYELRK NFS+TGNFGFGI EHIDLGIKYDP
Sbjct: 61 IRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDG 599
SIGIYG+DFY + KS+IG RI++EE ++WF+ ++DG
Sbjct: 121 SIGIYGLDFYVVLGRTGFSIADKKRQKSRIGFRLRIRQEEGMRWFQQKYDG 171
>dbj|BAB29059.1| (AK013923) putative [Mus musculus]
Length = 178
Score = 244 bits (623), Expect = 7e-64
Identities = 119/165 (72%), Positives = 136/165 (82%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPMREL+I+KL LNI VGESGDRLTRAAKVLEQL+GQT V+SKARYTVR+FGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTQVFSKARYTVRSFGIRRNEKIA 69
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMD 470
VH TVRG KAEEILE+GLKV+EYELRK NFS+TGNFGFGI EHIDLGIKYDPSIGIYG+D
Sbjct: 70 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 129
Query: 471 FYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
FY + IGA HRI +EE ++WF+ ++DGI+
Sbjct: 130 FYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGII 174
>emb|CAC12883.1| (AJ295006) ribosomal protein L11-like [Nicotiana tabacum]
Length = 181
Score = 244 bits (622), Expect = 9e-64
Identities = 120/172 (69%), Positives = 143/172 (82%), Gaps = 1/172 (0%)
Frame = +3
Query: 90 MASEKA-NNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
MASEK +NPMRE+K+QKLVLNISVGESGDRLTRAAKVLEQLSGQ+PV+SKARYTVR+FG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFSETG FGFGI EHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
S GIYGMDFY + KS++G HR+ +E+ +KWF+ +++G++
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVI 173
>dbj|BAA92964.1| (AP001551) ESTs D15590(C0900),D48950(S15542),D22684(C0900)
correspond to a region of the predicted gene.~Similar to
Arabidopsis thaliana 60S ribosomal protein L11A (L16A).
(P42795) [Oryza sativa]
Length = 182
Score = 243 bits (620), Expect = 2e-63
Identities = 119/172 (69%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
Frame = +3
Query: 90 MASEKAN-NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
MASEK NPMRE+K+QKLVLNISVGESGDRLTRA+KVLEQLSGQ+PV+SKARYTVR+FG
Sbjct: 1 MASEKKQANPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFSETG FGFGI EHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
S GIYGMDFY + KS++G HR+ +E+ +KWF+ +++G++
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVI 173
>gb|AAD20460.2| (AF101385) ribosomal protein L11 [Homo sapiens]
Length = 177
Score = 243 bits (619), Expect = 2e-63
Identities = 118/165 (71%), Positives = 136/165 (81%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPMREL+I+KL LNI VGESGDRLTRAAKVLEQL+GQTPV+SKARYTVR+FGIRRNEKIA
Sbjct: 9 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMD 470
VH TVRG KAEEILE+GLKV+E ELRK NFS+TGNFGFGI EHIDLGI+YDPSIGIYG+D
Sbjct: 69 VHCTVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIYGLD 128
Query: 471 FYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
FY + IGA HRI +EE ++WF+ ++DGI+
Sbjct: 129 FYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGII 173
>ref|XP_001555.3| ribosomal protein L11 [Homo sapiens]
Length = 167
Score = 242 bits (618), Expect = 3e-63
Identities = 118/163 (72%), Positives = 135/163 (82%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVH 296
MREL+I+KL LNI VGESGDRLTRAAKVLEQL+GQTPV+SKARYTVR+FGIRRNEKIAVH
Sbjct: 1 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 60
Query: 297 VTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMDFY 476
TVRG KAEEILE+GLKV+EYELRK NFS+TGNFGFGI EHIDLGIKYDPSIGIYG+DFY
Sbjct: 61 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 120
Query: 477 CCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
+ IGA HRI +EE ++WF+ ++DGI+
Sbjct: 121 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGII 163
>gb|AAF57560.1| (AE003796) RpL11 gene product [Drosophila melanogaster]
Length = 184
Score = 242 bits (618), Expect = 3e-63
Identities = 117/176 (66%), Positives = 138/176 (77%)
Frame = +3
Query: 78 ITAAMASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVR 257
+T + + A NPMR+L I+KL LNI VGESGDRLTRAAKVLEQL+GQ PV+SKARYTVR
Sbjct: 4 VTKKIKRDPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 63
Query: 258 TFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIK 437
+FGIRRNEKIAVH TVRG KAEEILERGLKV+EYELR+ NFS TGNFGFGI EHIDLGIK
Sbjct: 64 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIK 123
Query: 438 YDPSIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
YDPSIGIYG+DFY + +G HR+ +E+ +KWF+ ++DGI+
Sbjct: 124 YDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGII 179
>sp|P46287|RL11_MEDSA 60S RIBOSOMAL PROTEIN L11 (L5)
pir||S42497 ribosomal protein L11.e - alfalfa
pir||S51819 ribosomal protein L11, cytosolic - alfalfa
emb|CAA55090.1| (X78284) RL5 ribosomal protein [Medicago sativa]
Length = 181
Score = 240 bits (612), Expect = 1e-62
Identities = 117/172 (68%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Frame = +3
Query: 90 MASEKA-NNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
MASEK +NPMRE+K+QKLVLNISVGESGDRLTRAAKVLEQLSGQTPV+SKARYTVR+FG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
S GIYGMDF+ + K+++G HR+ +++ +KWF+ +++G++
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
>pir||T49153 ribosomal protein L11-like - Arabidopsis thaliana
emb|CAB88287.1| (AL353032) ribosomal protein L11-like [Arabidopsis thaliana]
dbj|BAB09220.1| (AB012245) ribosomal protein L11-like [Arabidopsis thaliana]
gb|AAG41458.1|AF326876_1 (AF326876) ribosomal protein L11, cytosolic [Arabidopsis thaliana]
gb|AAK00379.1|AF339697_1 (AF339697) putative ribosomal protein [Arabidopsis thaliana]
gb|AAK60313.1|AF385722_1 (AF385722) AT4g18730/F28A21_140 [Arabidopsis thaliana]
gb|AAK62625.1| (AY039570) AT4g18730/F28A21_140 [Arabidopsis thaliana]
Length = 182
Score = 239 bits (611), Expect = 2e-62
Identities = 116/172 (67%), Positives = 143/172 (82%), Gaps = 1/172 (0%)
Frame = +3
Query: 90 MASEKA-NNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
MASEK +NPMR++K+QKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVR+FG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
S GIYGMDFY + K+++G HR+ +++ +KWF+ +++G++
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVI 173
>sp|P42795|R111_ARATH 60S RIBOSOMAL PROTEIN L11A (L16A)
emb|CAA57395.1| (X81799) ribosomal protein L16 [Arabidopsis thaliana]
Length = 182
Score = 238 bits (608), Expect = 4e-62
Identities = 115/172 (66%), Positives = 143/172 (82%), Gaps = 1/172 (0%)
Frame = +3
Query: 90 MASEKA-NNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
MASEK +NPMR++K+QKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVR+FG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGI+YDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIRYDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
S GIYGMDFY + K+++G HR+ +++ +KWF+ +++G++
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
>sp|P42794|RL11_ARATH 60S RIBOSOMAL PROTEIN L11 (L16)
pir||S49033 ribosomal protein L11, cytosolic - Arabidopsis thaliana
emb|CAA57394.1| (X81798) ribosomal protein L16 [Arabidopsis thaliana]
Length = 182
Score = 238 bits (607), Expect = 5e-62
Identities = 115/172 (66%), Positives = 143/172 (82%), Gaps = 1/172 (0%)
Frame = +3
Query: 90 MASEKA-NNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
MASEK +NPMR++K+QKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVR+FG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
S GIYGM+FY + K+++G HR+ +++ +KWF+ +++G++
Sbjct: 121 STGIYGMEFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVI 173
>ref|NP_000966.1| ribosomal protein L11 [Homo sapiens]
pir||S45049 ribosomal protein L11, cytosolic - human
emb|CAA55816.1| (X79234) ribosomal protein L11 [Homo sapiens]
Length = 178
Score = 238 bits (607), Expect = 5e-62
Identities = 116/165 (70%), Positives = 134/165 (80%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPMREL+I+KL LNI VGESG RLTRAAKVLEQL+GQTPV+SKARYTVR+FGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 69
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMD 470
VH VRG KAEEILE+GLKV+E ELRK NFS+TGNFGFGI EHIDLGI+YDPSIGIYG+D
Sbjct: 70 VHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIYGLD 129
Query: 471 FYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
FY + IGA HRI +EE ++WF+ ++DGI+
Sbjct: 130 FYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGII 174
>sp|P42796|R112_ARATH 60S RIBOSOMAL PROTEIN L11B (L16B)
pir||T04865 ribosomal protein L11, cytosolic - Arabidopsis thaliana
emb|CAA57396.1| (X81800) ribosomal protein L16 [Arabidopsis thaliana]
emb|CAB37458.1| (AL035526) ribosomal protein L11, cytosolic [Arabidopsis thaliana]
emb|CAB78875.1| (AL161549) ribosomal protein L11, cytosolic [Arabidopsis thaliana]
Length = 184
Score = 238 bits (607), Expect = 5e-62
Identities = 112/171 (65%), Positives = 141/171 (81%)
Frame = +3
Query: 93 ASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIR 272
+ +K +NPMR++K+QKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVR+FGIR
Sbjct: 5 SEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIR 64
Query: 273 RNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSI 452
RNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDPS
Sbjct: 65 RNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPST 124
Query: 453 GIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
GIYGMDFY + K+++G HR+ +++ +KWF+ +++G++
Sbjct: 125 GIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVI 175
>sp|P46222|RL11_DROME 60S RIBOSOMAL PROTEIN L11
pir||S60245 ribosomal protein L11.e, cytosolic - fruit fly (Drosophila
melanogaster)
gb|AAC46585.1| (U15643) ribosomal protein DL11 [Drosophila melanogaster]
prf||2108277A ribosomal protein L11 [Drosophila melanogaster]
Length = 184
Score = 235 bits (599), Expect = 4e-61
Identities = 114/176 (64%), Positives = 135/176 (75%)
Frame = +3
Query: 78 ITAAMASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVR 257
+T + + A P +L I+KL LNI VGESGDRLTRAAKVLEQL+GQ PV+SKARYTVR
Sbjct: 4 VTKKIKRDPAQEPDEDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 63
Query: 258 TFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIK 437
+FGIRRNEKIAVH TVRG KAEEILERGLKV+EYELR+ NFS TGNFGFGI EHIDLGIK
Sbjct: 64 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIK 123
Query: 438 YDPSIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
YDPSIGIYG+DFY + +G HR+ +E+ +KWF+ ++DGI+
Sbjct: 124 YDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGII 179
>sp|Q29205|RL11_PIG 60S RIBOSOMAL PROTEIN L11
Length = 166
Score = 228 bits (582), Expect = 4e-59
Identities = 113/157 (71%), Positives = 125/157 (78%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPMREL+I+KL LNI VGESGDRLTR AKVLEQL+GQTPV+SKARYTVR+FGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRXAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 69
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMD 470
VH TVRG KAEEILE+GLKV+EYELRK NFS+TGNFGFGI EHIDLGIKYDPSIGIYG+
Sbjct: 70 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLX 129
Query: 471 FYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWF 581
FY + IGA HR +E +WF
Sbjct: 130 FYVVLGRPGFSIAGKKRRXGFIGAKHRXSKEXAXRWF 166
>sp|P42922|RL11_LEICH 60S RIBOSOMAL PROTEIN L11
gb|AAC46921.1| (U16018) ribosomal protein L-11 [Leishmania chagasi]
Length = 188
Score = 228 bits (581), Expect = 5e-59
Identities = 112/172 (65%), Positives = 133/172 (77%)
Frame = +3
Query: 90 MASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGI 269
+A KA NPMRE+ ++KL +NI VGESGDRLTRA+KVLEQL QTPV S+AR TVRTFGI
Sbjct: 2 VAESKAANPMREIVVKKLCINICVGESGDRLTRASKVLEQLCEQTPVLSRARLTVRTFGI 61
Query: 270 RRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPS 449
RRNEKIAVH TVRG KAEE+LE+GLKVKE+EL+ NFS+TG+FGFGI EHIDLGIKYDPS
Sbjct: 62 RRNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFSDTGSFGFGIDEHIDLGIKYDPS 121
Query: 450 IGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
GIYGMDFY + S++G SH + +EE +KWF+ DGI+
Sbjct: 122 TGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGII 173
>sp|P48157|RL11_LEIMA 60S RIBOSOMAL PROTEIN L11
gb|AAC46922.1| (U16999) ribosomal protein [Leishmania major]
emb|CAC22698.1| (AL389894) 60S ribosomal protein L11 (L5, L16) [Leishmania major]
Length = 188
Score = 227 bits (578), Expect = 1e-58
Identities = 111/172 (64%), Positives = 133/172 (76%)
Frame = +3
Query: 90 MASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGI 269
+A KA NPMRE+ ++KL +NI VGESGDRLTRA+KVLEQL QTPV S+AR TVRTFGI
Sbjct: 2 VAESKAANPMREIVVKKLCINICVGESGDRLTRASKVLEQLCEQTPVLSRARLTVRTFGI 61
Query: 270 RRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPS 449
RRNEKIAVH TVRG KAEE+LE+GLKVKE+EL+ NF++TG+FGFGI EHIDLGIKYDPS
Sbjct: 62 RRNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFADTGSFGFGIDEHIDLGIKYDPS 121
Query: 450 IGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
GIYGMDFY + S++G SH + +EE +KWF+ DGI+
Sbjct: 122 TGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGII 173
>sp|O22540|RL11_ORYSA 60S RIBOSOMAL PROTEIN L11
pir||T02091 ribosomal protein L11 - rice
gb|AAB82139.1| (AF022736) ribosomal protein [Oryza sativa]
Length = 182
Score = 225 bits (573), Expect = 4e-58
Identities = 111/172 (64%), Positives = 138/172 (79%), Gaps = 1/172 (0%)
Frame = +3
Query: 90 MASEKA-NNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
MASEK +NPMR++K+QKLVLNISVGESGDRLTRA+KVLEQL GQ+PV+SKARYTVR+FG
Sbjct: 1 MASEKKQSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLIGQSPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIA +VTVRG KA ++LE GLKVKE EL +R+ SETG FGFGI EHIDLGI+ DP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKECELLRRSCSETGCFGFGIQEHIDLGIQCDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
S G YGMDFY + KS++G HR+ +E+ +KWF+ +++G++
Sbjct: 121 STGFYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVI 173
>gb|AAD21733.1| (AC006931) 60S ribosomal protein L11B [Arabidopsis thaliana]
Length = 182
Score = 222 bits (566), Expect = 3e-57
Identities = 109/163 (66%), Positives = 135/163 (81%), Gaps = 10/163 (6%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKV----------LEQLSGQTPVYSKARYTVRTFG 266
MR++K+QKLVLNISVGESGDRLTRA+KV LEQLSGQTPV+SKARYTVR+FG
Sbjct: 1 MRDIKVQKLVLNISVGESGDRLTRASKVPPVFYPFSVVLEQLSGQTPVFSKARYTVRSFG 60
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDP 446
IRRNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 447 SIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
S GIYGMDFY + K+++G HR+ +++ +KWF+ +++G++
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
>gb|AAG13293.1|AF266173_1 (AF266173) 60S ribosomal protein L11 [Gillichthys mirabilis]
Length = 177
Score = 222 bits (565), Expect = 4e-57
Identities = 108/126 (85%), Positives = 118/126 (92%)
Frame = +3
Query: 99 EKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRN 278
EK NPM+EL+I+KL LNI VGESGDRLTRAAKVLEQL+GQTPV+SKARYTVR+FGIRRN
Sbjct: 6 EKKENPMKELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Query: 279 EKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGI 458
EKIAVH TVRG KAEEILE+GLKV+EYELRK NFS+TGNFGFGI EHIDLGIKYDPSIGI
Sbjct: 66 EKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGI 125
Query: 459 YGMDFY 476
YG+DFY
Sbjct: 126 YGLDFY 131
>sp|P24119|RL11_TETTH 60S RIBOSOMAL PROTEIN L11 (L21)
pir||JU0456 ribosomal protein L11.e - Tetrahymena thermophila
gb|AAB00917.1| (M37892) ribosomal protein L21 [Tetrahymena thermophila]
Length = 172
Score = 221 bits (562), Expect = 8e-57
Identities = 105/170 (61%), Positives = 131/170 (76%)
Frame = +3
Query: 96 SEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRR 275
++K N MRE+KI KLV+N VGESGD+LT+AAKVL+ LSGQ PV+S+ARYT+R+FGI+R
Sbjct: 2 TDKKENKMREVKIAKLVINCCVGESGDKLTKAAKVLKDLSGQEPVFSRARYTIRSFGIKR 61
Query: 276 NEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIG 455
NEK+AVHVT+RG KA +IL RGLKVKE ELRK+NFS TGNFGFGI EHIDLG+KYDPS G
Sbjct: 62 NEKMAVHVTIRGDKARDILTRGLKVKEMELRKKNFSNTGNFGFGIQEHIDLGMKYDPSTG 121
Query: 456 IYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
I+GMDFY + S++G + I +EE + WFK+ F+G V
Sbjct: 122 IFGMDFYVVLERPGTRVARRRRATSRVGNNQMISKEECINWFKTEFEGNV 171
>sp|P50881|RL11_CHLRE 60S RIBOSOMAL PROTEIN L11
pir||T08155 ribosomal protein L11 - Chlamydomonas reinhardtii
emb|CAA64625.1| (X95313) 60S ribosomal protein L11 [Chlamydomonas reinhardtii]
Length = 170
Score = 216 bits (550), Expect = 2e-55
Identities = 99/163 (60%), Positives = 128/163 (77%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVH 296
MRE++I KLVLNI+V ESGDRL +AAKVLEQL+ Q PVY +AR+TVR+F IRRNEKI+ +
Sbjct: 1 MREIRISKLVLNIAVAESGDRLQKAAKVLEQLTSQVPVYGRARFTVRSFAIRRNEKISCY 60
Query: 297 VTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMDFY 476
VTVRG KA ++++RGL VKE+EL ++NFS+TGNFGFGI EHIDLG+KYDPS GIYGMDFY
Sbjct: 61 VTVRGEKAYDLVKRGLAVKEFELIRKNFSDTGNFGFGIQEHIDLGLKYDPSTGIYGMDFY 120
Query: 477 CCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFDGIV 605
C+ K+ +G H++ +E+ +KWF+ FDG+V
Sbjct: 121 VCLERRGYRVARRRKQKAHVGVKHKVTKEDAIKWFQQEFDGVV 163
>ref|NP_113325.1| 60S ribosomal protein L11B [Guillardia theta]
gb|AAK39882.1|AF165818_90 (AF165818) 60S ribosomal protein L11B [Guillardia theta]
Length = 174
Score = 200 bits (509), Expect = 1e-50
Identities = 93/164 (56%), Positives = 125/164 (75%)
Frame = +3
Query: 102 KANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNE 281
K +N MR +K++KLV+N +GESGD+L +AA+VLEQL+GQTP +SKA+ T+R +GIRRNE
Sbjct: 3 KLDNDMRNIKLEKLVINCCIGESGDKLKKAARVLEQLTGQTPTFSKAKITIRNWGIRRNE 62
Query: 282 KIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIY 461
+IA VTVRG KAEE+LER LKVK++ + +++FS TGNFGFGI EHIDLGIKYDP +GI+
Sbjct: 63 EIACKVTVRGIKAEELLERALKVKDFMINEKSFSTTGNFGFGIEEHIDLGIKYDPLVGIF 122
Query: 462 GMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRF 593
GMDFYC + +S IG RIK+ +++ WF ++F
Sbjct: 123 GMDFYCVLCRNGHRIKYKKRSRSCIGKKQRIKKSDSIIWFNNKF 166
>sp|Q94793|RL11_TOXCA 60S RIBOSOMAL PROTEIN L11
gb|AAB07369.1| (U63521) 60S ribosomal protein [Toxocara canis]
Length = 125
Score = 193 bits (490), Expect = 2e-48
Identities = 97/113 (85%), Positives = 103/113 (90%)
Frame = +3
Query: 99 EKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRN 278
+KA N MRELKIQKL LNI VGE GDRLTRAAKVLEQL+GQTPV+SKARYTVRTFGIRRN
Sbjct: 13 KKARNVMRELKIQKLCLNICVGEFGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRN 72
Query: 279 EKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIK 437
EKIAVH TVRGPKAEEILE+GLKVKEYEL K NFS+TGNFG G+ EHIDLGIK
Sbjct: 73 EKIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSDTGNFGLGVQEHIDLGIK 125
>dbj|BAA12249.1| (D84173) ribosomal protein L11 [Paramecium caudatum]
Length = 166
Score = 182 bits (463), Expect = 3e-45
Identities = 86/154 (55%), Positives = 115/154 (73%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVH 296
MR+++I+KL+++I GESGD+LT+AAKVLE L+GQ PV+ KARYTVR+FGIRRNEKI+V+
Sbjct: 1 MRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRNEKISVY 60
Query: 297 VTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMDFY 476
T+RG +A +IL RGL+VKE EL+KRNFS++GNFG GI EHIDLG+KYDP GI+GMDFY
Sbjct: 61 CTIRGDQARDILVRGLRVKEMELKKRNFSDSGNFGLGIQEHIDLGLKYDPYTGIFGMDFY 120
Query: 477 CCMXXXXXXXXXXXXXKSKIGASHRIKREETVKW 578
+ S++G + ++ W
Sbjct: 121 VALSRPGLRVAERKSRNSRLGTKPKSHPKKEAGW 154
>sp|Q9UX93|RL5_SULSO 50S RIBOSOMAL PROTEIN L5P
emb|CAB57599.1| (Y18930) ribosomal protein L5 (HMAL5) [Sulfolobus solfataricus]
gb|AAK41006.1| (AE006696) LSU ribosomal protein L5AB (rpl5AB) [Sulfolobus
solfataricus]
Length = 182
Score = 145 bits (365), Expect = 6e-34
Identities = 69/164 (42%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Frame = +3
Query: 105 ANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEK 284
+ NPMR++K+ K+ +NI +GESGDRL +A ++L++L+G PVY+ ++ T+R FGIR+ ++
Sbjct: 12 SQNPMRKVKLSKVTVNIGLGESGDRLQKAYQLLQELTGAKPVYTISKKTIREFGIRKGQE 71
Query: 285 IAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIY 461
I V VT+RG +AEE L + L+ Y L+K +F + GN FGI+EH+ L G +YDP IGI+
Sbjct: 72 IGVKVTLRGAQAEEFLRKVLEAIGYRLKKSSFDDYGNVSFGIAEHVILPGARYDPEIGIF 131
Query: 462 GMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFD 596
GMD + K+KI HR+ +EE +++ ++ F+
Sbjct: 132 GMDIAITLERAGYRISRRRRKKAKIPKRHRVTKEEAMEFLRNNFN 176
>sp|O59431|RL5_PYRHO 50S RIBOSOMAL PROTEIN L5P
pir||A71186 probable ribosomal protein L5 - Pyrococcus horikoshii
dbj|BAA30880.1| (AP000007) 188aa long hypothetical 50S ribosomal protein L5
[Pyrococcus horikoshii]
Length = 188
Score = 142 bits (358), Expect = 4e-33
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
+PMR +IQK+ +NI VGESG+RLT+A +L++L+GQ P+ KA+ T R FGIRR E IA
Sbjct: 18 HPMRRPRIQKVTINIGVGESGERLTKAEIMLQRLTGQKPIRRKAKKTNRDFGIRRGEPIA 77
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGM 467
V VT+RGPKA E+L+R L +Y+L+ +F E GN FGI EHI++ G++YDP IGI+GM
Sbjct: 78 VKVTLRGPKAYEMLKRLLAAVDYKLKASSFDEHGNVCFGIEEHINIPGVEYDPEIGIFGM 137
Query: 468 DFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRF 593
D + +++I H++ +EE + + F
Sbjct: 138 DVCVTLERPGFRVARRKRKRARIPTRHKLTKEEGMLYMMEEF 179
>ref|NP_070737.1| LSU ribosomal protein L5P (rpl5P) [Archaeoglobus fulgidus]
sp|O28367|RL5_ARCFU 50S RIBOSOMAL PROTEIN L5P
pir||G69488 LSU ribosomal protein L5P (rpl5P) homolog - Archaeoglobus fulgidus
gb|AAB89357.1| (AE000971) LSU ribosomal protein L5P (rpl5P) [Archaeoglobus
fulgidus]
Length = 178
Score = 141 bits (355), Expect = 8e-33
Identities = 71/159 (44%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPMRE+ + K+V+NI VGESG+R +A +LE+L Q P + A+ T++ FGIR+ E I
Sbjct: 14 NPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEAIG 73
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGM 467
+ VT+RG KA + L+ L VKE L +++ E G F FGI+EHIDL G+ YDP +GI+GM
Sbjct: 74 IKVTLRGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGM 132
Query: 468 DFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKS 587
D + K+KI SHR+ +E+T++W +S
Sbjct: 133 DVCVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLES 172
>ref|NP_126019.1| LSU ribosomal protein L5P [Pyrococcus abyssi]
sp|Q9V1U9|RL5_PYRAB 50S RIBOSOMAL PROTEIN L5P
pir||C75146 lsu ribosomal protein l5p (rpl5p) PAB2130 - Pyrococcus abyssi
(strain Orsay)
emb|CAB49250.1| (AJ248284) LSU ribosomal protein L5P (rpl5P) [Pyrococcus abyssi]
Length = 188
Score = 140 bits (352), Expect = 2e-32
Identities = 73/161 (45%), Positives = 105/161 (64%), Gaps = 1/161 (0%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
+PMR+ +I+K+ +NI VGESG+RLT+A +LE+L+GQ P+ KA+ T R FGIRR E IA
Sbjct: 18 HPMRKPRIEKVTINIGVGESGERLTKAEIMLERLTGQKPIRRKAKKTNRDFGIRRGEPIA 77
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGM 467
V VT+RGPKA E+L+R L + L+ +F E GN FGI EHI++ G++YDP IGI+GM
Sbjct: 78 VKVTLRGPKAYEMLKRLLAAVDNRLKASSFDEHGNVCFGIDEHINIPGVEYDPEIGIFGM 137
Query: 468 DFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRF 593
D + ++KI H++ +EE + + F
Sbjct: 138 DVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVYMMEEF 179
>sp|P54040|RL5_METJA 50S RIBOSOMAL PROTEIN L5P
pir||E64358 ribosomal protein L5 - Methanococcus jannaschii
gb|AAB98458.1| (U67497) LSU ribosomal protein L5P (rplE) [Methanococcus
jannaschii]
Length = 190
Score = 133 bits (335), Expect = 2e-30
Identities = 71/161 (44%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPM + +I+K+V+N VGESGDRLT+ A+V+E+L+GQ P+ ++A+ T +FGIR+ I
Sbjct: 10 NPMLKPRIEKVVVNFGVGESGDRLTKGAQVIEELTGQKPIRTRAKQTNPSFGIRKKLPIG 69
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRK---RNFSETGNFGFGISEHIDL-GIKYDPSIGI 458
+ VT+RG KAEE L+ + + E +K +F + GNF FGI EHID G KYDP IGI
Sbjct: 70 LKVTLRGKKAEEFLKNAFEAFQKEGKKLYDYSFDDYGNFSFGIHEHIDFPGQKYDPMIGI 129
Query: 459 YGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRF 593
+GMD + ++KI HR+ REE +++ + F
Sbjct: 130 FGMDVCVTLERPGFRVKRRKRCRAKIPRRHRLTREEAIEFIEKTF 174
>sp|Q9YF87|RL5_AERPE 50S RIBOSOMAL PROTEIN L5P
pir||A72727 probable ribosomal protein L5 APE0354 - Aeropyrum pernix (strain
K1)
dbj|BAA79309.1| (AP000059) 194aa long hypothetical 50S ribosomal protein L5
[Aeropyrum pernix]
Length = 194
Score = 132 bits (333), Expect = 3e-30
Identities = 73/174 (41%), Positives = 106/174 (59%), Gaps = 2/174 (1%)
Frame = +3
Query: 51 RQVPSPGRLITAAMASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPV 230
+ +P P ++ + E +PMR +I K+ +NIS+G+SG+RL RAA+VLE+L+GQ PV
Sbjct: 8 QSLPIPPERVSEIL-DEWKRSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPV 66
Query: 231 YSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGI 410
+ KA+ T+R FG+R+ E IAV VT+RG KA L+R L + ++ + E GN FGI
Sbjct: 67 FRKAKRTIRAFGVRKGENIAVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGI 126
Query: 411 SEHIDL-GIKYDPSIGIYGMDFYCCMXX-XXXXXXXXXXXKSKIGASHRIKREETV 572
EHI + G+KYDP +GI GMD + + I HR+ REET+
Sbjct: 127 EEHILIPGVKYDPRVGILGMDVAITIQRPGHRIVERRRQRRGHIPRRHRVTREETM 182
>sp|P14029|RL5_METVA 50S RIBOSOMAL PROTEIN L5P
pir||R5MX5 ribosomal protein L5 - Methanococcus vannielii
emb|CAA34693.1| (X16720) rpL5 (AA 1-181) [Methanococcus vannielii]
Length = 181
Score = 131 bits (330), Expect = 7e-30
Identities = 71/160 (44%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 114 PMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAV 293
PM++ +IQK+ +N VGE+GDRLT AKV+E L+GQ PV + A+ T FGIR+ I +
Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIETLTGQAPVRTLAKQTNPAFGIRKKLPIGL 70
Query: 294 HVTVRGPKAEEILER---GLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIY 461
VT+RG AEE LE KV L +F + GNF FG+ EHID G KYDP++GIY
Sbjct: 71 KVTLRGKNAEEFLENAFVAFKVSGKVLYASSFDKVGNFSFGVPEHIDFPGQKYDPTVGIY 130
Query: 462 GMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRF 593
GMD +S I A H +K+EE +++ + +F
Sbjct: 131 GMDICVTFEKPGYRVKSRKLKRSHIPAKHLVKKEEAIEYIEKKF 174
>sp|O26124|RL5_METTH 50S RIBOSOMAL PROTEIN L5P
pir||E69080 ribosomal protein L5 - Methanobacterium thermoautotrophicum
(strain Delta H)
gb|AAB84517.1| (AE000795) ribosomal protein L11 (E.coli L5) [Methanothermobacter
thermautotrophicus]
Length = 168
Score = 131 bits (330), Expect = 7e-30
Identities = 67/161 (41%), Positives = 99/161 (60%), Gaps = 1/161 (0%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPM E++I K+ LNI VGE G++L RA ++LE++SGQ PV + ++ T FGIR+ + IA
Sbjct: 2 NPMEEVRIFKVTLNIGVGEGGEKLARAERLLEEMSGQKPVRTHSKVTNPEFGIRKKQPIA 61
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGM 467
VT+RG +AE++L+ L+ L+ F E GN GI EHID+ G+KYDP IGI+GM
Sbjct: 62 CKVTLRGERAEKVLKMFLEGIGNRLKASQFDEYGNVSMGIDEHIDIPGMKYDPEIGIFGM 121
Query: 468 DFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRF 593
+ + K+ HR+ REE +++ K +F
Sbjct: 122 NLSVTFEKPGHRINRRRIQRRKVPQKHRVSREEAIEFMKEKF 163
>sp|P41202|RL5_SULAC 50S RIBOSOMAL PROTEIN L5P
gb|AAB21095.1| (S77838) ribosomal protein L5 [Sulfolobus acidocaldarius, Peptide,
178 aa]
emb|CAA69090.1| (Y07778) ribosomal protein L5 [Sulfolobus acidocaldarius]
Length = 178
Score = 125 bits (313), Expect = 6e-28
Identities = 62/170 (36%), Positives = 99/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 87 AMASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFG 266
+M K N MR + + K+ +NI VGESG+RL +A +++++L+G PVY+K R ++R FG
Sbjct: 2 SMQEAKKENVMRRVVLDKVTVNIGVGESGERLQKAYQLVQELTGVKPVYTKGRKSIREFG 61
Query: 267 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYD 443
+R+ I V T+R A E L++ L + L++ +F GN FGI+EH+ + G +YD
Sbjct: 62 VRKGAPIGVKATLRRQAAVEFLKKVLPAVNFRLKQSSFDNYGNVSFGIAEHVLIPGTRYD 121
Query: 444 PSIGIYGMDFYCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFD 596
P IGI+GMD + K+ I HR+ +EE + + K F+
Sbjct: 122 PEIGIFGMDVAITLVRPGYRTMKRKRKKASIPRRHRVTKEEAINFMKENFN 172
>sp|P16168|RL11_DICDI 60S RIBOSOMAL PROTEIN L11 (L5) (VEGETATIVE SPECIFIC PROTEIN V18)
pir||S07562 ribosomal protein L11.e - slime mold (Dictyostelium discoideum)
(fragment)
emb|CAA33442.1| (X15382) V18 [Dictyostelium discoideum]
Length = 79
Score = 124 bits (311), Expect = 1e-27
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVH 296
MR L+I+KLVLNI VGESGDRL RAAKVLEQL+GQTPVYSKARYTVR+F IRRNE+IA H
Sbjct: 1 MRGLRIEKLVLNICVGESGDRLVRAAKVLEQLTGQTPVYSKARYTVRSFNIRRNEQIAAH 60
Query: 297 VTVRGPKAEEILERGLKVK 353
VTVRG KA EILE GL V+
Sbjct: 61 VTVRGEKAAEILEIGLNVR 79
>ref|NP_110857.1| 50S ribosomal protein L5 [Thermoplasma volcanium]
dbj|BAB59484.1| (AP000992) ribosomal protein large subunit L11 [Thermoplasma
volcanium]
Length = 170
Score = 121 bits (304), Expect = 7e-27
Identities = 69/161 (42%), Positives = 99/161 (60%), Gaps = 2/161 (1%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
N M+E+ I K+V+NI VG++GDRLT+AAKVLE L+G P + A+ +VR F IR+ I
Sbjct: 2 NQMQEIIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKPTQTLAKKSVRDFNIRKRLPIG 61
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGM 467
V VT+R A L + L VK+Y++ +F + GN FGIS++ D G+KYDP IGI+GM
Sbjct: 62 VKVTLRKDDAVNFLNKALYVKDYKIPDYSFDKHGNAYFGISDYTDFKGMKYDPDIGIFGM 121
Query: 468 DFYCCM-XXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRF 593
D + K I +S RIK++E V++ + F
Sbjct: 122 DVAIVLKRRGGYRIEKRKIGKKTIPSSIRIKKDEAVEFLEKNF 164
>sp|Q56231|RL5_THEAC 50S RIBOSOMAL PROTEIN L5P
pir||T37468 ribosomal protein L5 - Thermoplasma acidophilum
gb|AAB02245.1| (U57643) ribosomal protein L5 [Thermoplasma acidophilum]
emb|CAC12382.1| (AL445067) 50S RIBOSOMAL PROTEIN L5 [Thermoplasma acidophilum]
Length = 170
Score = 117 bits (293), Expect = 1e-25
Identities = 67/161 (41%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIA 290
NPM E+ I K+V+NI VG++GDRLT+AAKVLE L+G + A+ ++R F IR+ I
Sbjct: 2 NPMEEVIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKATNTLAKKSIRDFNIRKRLPIG 61
Query: 291 VHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGM 467
V VT+R A E L++ VK+Y++ +F + GN FGIS++ D G+KYDP IGI+GM
Sbjct: 62 VKVTLRKKDAMEFLQKAFYVKDYKITDYSFDKHGNAYFGISDYTDFKGMKYDPDIGIFGM 121
Query: 468 DFYCCMXXXXXXXXXXXXXKSK-IGASHRIKREETVKWFKSRF 593
D SK I S R+++EE + + F
Sbjct: 122 DVAIVFRRRGGYRIERRRIGSKTIPNSIRVRKEEAQDFLQKNF 164
>sp|P50558|RL5_HALN1 50S RIBOSOMAL PROTEIN L5P (HSAL5)
gb|AAG19949.1| (AE005077) 50S ribosomal protein L5P; Rpl5p [Halobacterium sp.
NRC-1]
Length = 175
Score = 105 bits (263), Expect = 4e-22
Identities = 60/160 (37%), Positives = 88/160 (54%), Gaps = 1/160 (0%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVH 296
MRE +I+K+V+++ VG+ G L A +LE ++GQ V +KA+ FG+R+ + I
Sbjct: 12 MREPRIEKVVVHMGVGQGGVELQNAETILEAITGQQTVRTKAKSPEPEFGLRQGDPIGAK 71
Query: 297 VTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGMDF 473
VT+R A + LER L +L +R F TGN FGI EH D +YDP+IGIYGMD
Sbjct: 72 VTLRDDTAVDFLERALPAA--DLDRRQFDNTGNVSFGIEEHTDFPSQEYDPNIGIYGMDV 129
Query: 474 YCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFD 596
+ +I ++HR+ E+ V + S FD
Sbjct: 130 TVNLTRPGYRVAKRDQGTRQIPSNHRLNSEDAVSFLVSNFD 170
>sp|P14124|RL5_HALMA 50S RIBOSOMAL PROTEIN L5P (HMAL5) (HL13)
pir||R5HSL5 ribosomal protein L5 [validated] - Haloarcula marismortui
emb|CAA41284.1| (X58395) ribosomal protein [Haloarcula marismortui]
prf||1718307A ribosomal protein L5 [Haloarcula marismortui]
Length = 177
Score = 104 bits (260), Expect = 9e-22
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVH 296
MRE +I+K+V+++ +G G L A +L +++GQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 297 VTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGMDF 473
VT+R AEE L+ L + EL F +TGNF FG+ EH + +YDPSIGIYG+D
Sbjct: 74 VTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDV 131
Query: 474 YCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFD 596
+ I HR+ + V + +S +D
Sbjct: 132 TVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYD 172
>pdb|1FFK|D Chain D, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
pdb|1GIY|G Chain G, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1giy, Contains The 50s Ribosome Subunit. The
30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
In The File 1gix
Length = 176
Score = 104 bits (260), Expect = 9e-22
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVH 296
MRE +I+K+V+++ +G G L A +L +++GQ PV +KA+ TV F IR + I
Sbjct: 13 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 72
Query: 297 VTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGMDF 473
VT+R AEE L+ L + EL F +TGNF FG+ EH + +YDPSIGIYG+D
Sbjct: 73 VTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDV 130
Query: 474 YCCMXXXXXXXXXXXXXKSKIGASHRIKREETVKWFKSRFD 596
+ I HR+ + V + +S +D
Sbjct: 131 TVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYD 171
>gb|AAF78516.1|AF195217_1 (AF195217) ribosomal protein L16 [Pyrus pyrifolia]
Length = 59
Score = 90.9 bits (224), Expect = 1e-17
Identities = 41/51 (80%), Positives = 46/51 (89%)
Frame = +3
Query: 324 EILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMDFY 476
++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDPS GIYGMDF+
Sbjct: 2 QLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFF 52
>dbj|BAB29449.1| (AK014593) putative [Mus musculus]
Length = 156
Score = 88.2 bits (217), Expect = 8e-17
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = +3
Query: 342 LKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPSIGIYGMDFY 476
++V+EYELRK NFS+TGNFGFGI EHIDLGIKYDPSIGIYG+DFY
Sbjct: 17 IQVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 61
>gb|AAK23241.1| (AE005801) ribosomal protein L5 [Caulobacter crescentus]
Length = 185
Score = 70.1 bits (170), Expect = 2e-11
Identities = 48/135 (35%), Positives = 77/135 (56%), Gaps = 11/135 (8%)
Frame = +3
Query: 78 ITAAMASEKA-NNPMRELKIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKAR 245
I AAM + N M+ K+ K+VLN+ +GE+ + A K L+ ++GQ PV +KAR
Sbjct: 18 IRAAMKEQFGYTNEMQIPKLDKIVLNMGIGEAVADSKKAQTALKDLQAIAGQKPVATKAR 77
Query: 246 YTVRTFGIRRNEKIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFG 407
++ F +R + VT+R + E L+R + +VK++ L ++F GN+ G
Sbjct: 78 KSIAGFKLREGMVVGAKVTLRKDRMYEFLDRLVTIALPRVKDFRGLNGKSFDGRGNYAMG 137
Query: 408 ISEHIDL-GIKYDPSIGIYGMDFYCC 482
+ EH+ I YD I+GMD C
Sbjct: 138 LKEHLVFPEINYDQIEQIWGMDIIVC 163
>ref|NP_102132.1| 50S ribosomal protein L5 [Mesorhizobium loti]
dbj|BAB47918.1| (AP002994) 50S ribosomal protein L5 [Mesorhizobium loti]
Length = 192
Score = 67.4 bits (163), Expect = 2e-10
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Frame = +3
Query: 108 NNPMRELKIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRN 278
+N M+ ++ K+VLN+ VGE+ + + AA+ L ++GQ V ++AR ++ F +R N
Sbjct: 36 DNDMQVPRLDKIVLNMGVGEATADSKKPSVAAEDLALIAGQKAVVTRARNSIAGFKVREN 95
Query: 279 EKIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIK 437
I VT+R + E L+R + +V+++ L ++F GN+ GI EHI I
Sbjct: 96 MPIGAKVTLRKERMYEFLDRLVNIALPRVRDFRGLNPKSFDGRGNYAMGIKEHIVFPEIN 155
Query: 438 YDPSIGIYGMDFYCC 482
YD I+GMD C
Sbjct: 156 YDKVDQIWGMDVIVC 170
>sp|Q9ZCR7|RL5_RICPR 50S RIBOSOMAL PROTEIN L5
pir||E71670 ribosomal protein L5 - Rickettsia prowazekii
emb|CAA15087.1| (AJ235272) 50S RIBOSOMAL PROTEIN L5 (rplE) [Rickettsia prowazekii]
Length = 179
Score = 66.6 bits (161), Expect = 3e-10
Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Frame = +3
Query: 129 KIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHV 299
KI+K+V+N+ VGE+ + A L +SGQ PV + AR ++ TF +R N KI V
Sbjct: 30 KIKKIVINMGVGEAIADSKVINNALNDLTLISGQKPVVTLARKSIATFKLRENMKIGCKV 89
Query: 300 TVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKYDPSIGI 458
T+R + + LER + +VKE+ ++F GNF FG+ E I I YD I
Sbjct: 90 TLRKDRMYDFLERLVIVALPRVKEFRGFSYKSFDGKGNFTFGLKEQIVFPEINYDKIDTI 149
Query: 459 YGMD 470
GMD
Sbjct: 150 RGMD 153
>sp|O67568|RL5_AQUAE 50S RIBOSOMAL PROTEIN L5
pir||G70442 ribosomal protein L5 - Aquifex aeolicus
gb|AAC07529.1| (AE000749) ribosomal protein L05 [Aquifex aeolicus]
Length = 188
Score = 65.9 bits (159), Expect = 4e-10
Identities = 45/120 (37%), Positives = 75/120 (62%), Gaps = 10/120 (8%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGD---RLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNE 281
+PM+ ++QK+V+N+ VGE+ +L RA + L ++GQ PV ++AR + F +R+
Sbjct: 32 SPMQIPRLQKIVVNMGVGEAVQDIRQLERAVEDLRAITGQQPVITRARKSEAGFKLRKGM 91
Query: 282 KIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKY 440
I VT+R + + L++ + +VK+++ L R+F GN+ FGI+E I I Y
Sbjct: 92 PIGCKVTLRKERMWDFLDKLISVALPRVKDFKGLSPRSFDGRGNYAFGIAEQIVFPEIDY 151
Query: 441 DPSIGIYGMD 470
D I GMD
Sbjct: 152 DKVDRIRGMD 161
>sp|Q9ZI40|RL5_AQUPY 50S RIBOSOMAL PROTEIN L5
Length = 188
Score = 64.3 bits (155), Expect = 1e-09
Identities = 44/120 (36%), Positives = 73/120 (60%), Gaps = 10/120 (8%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGD---RLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNE 281
NPM+ ++ K+V+N+ VGE+ +L RA + L ++GQ P+ ++AR + F +R+
Sbjct: 32 NPMQVPRLVKIVVNMGVGEAVQDIKQLERAVEDLRAITGQQPMITRARKSKAGFKLRKGM 91
Query: 282 KIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKY 440
I VT+R + L++ + +VK+++ L R+F GN+ FGI+E I I Y
Sbjct: 92 PIGCKVTLRNHTMWDFLDKVISVALPRVKDFKGLNPRSFDGRGNYAFGIAEQIVFPEIDY 151
Query: 441 DPSIGIYGMD 470
D I GMD
Sbjct: 152 DKVDRIRGMD 161
>sp|P46178|RL5_BUCAK 50S RIBOSOMAL PROTEIN L5
pir||JC2278 ribosomal protein L5 - pea aphid symbiont bacterium
dbj|BAA06587.1| (D31786) ribosomal protein L5 [Acyrthosiphon kondoi endosymbiont]
Length = 179
Score = 64.3 bits (155), Expect = 1e-09
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Frame = +3
Query: 30 LRQLHDLRQVPSPGRLITAAMASEKANNPMRELKIQKLVLNISVGES-GDR--LTRAAKV 200
+ +LHD + +I M+ N+ M+ +++K+ LN+ VGE+ D+ L AA
Sbjct: 1 MAKLHDYYK----DEVIKQLMSQFDYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAAD 56
Query: 201 LEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGL-----KVKEYE- 362
L +SGQ P+ +KAR +V F IR+ I VT+RG + E ER + +++++
Sbjct: 57 LAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLISIAVPRIRDFRG 116
Query: 363 LRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGMD 470
L ++F GN+ G+ E I I YD + G+D
Sbjct: 117 LSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLD 153
>sp|P10136|RL5_MYCCA 50S RIBOSOMAL PROTEIN L5
pir||R5YM5C ribosomal protein L5 - Mycoplasma capricolum
emb|CAA29716.1| (X06414) ribosomal protein L5 (AA 1-180) [Mycoplasma capricolum]
Length = 180
Score = 64.3 bits (155), Expect = 1e-09
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGD---RLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKI 287
M+ KIQK+V+N+ +G++ +L A LE+LSGQ P+ +KA+ ++ F +R I
Sbjct: 27 MQVPKIQKIVINMGIGDATTDPKKLDAAIFELEKLSGQKPIVTKAKKSLAVFKLREGMAI 86
Query: 288 AVHVTVRGPKAEEILERGLKVKEYELR------KRNFSETGNFGFGISEHIDL-GIKYDP 446
VT+RG K + L++ + V +R K +F GNF GI E I + +D
Sbjct: 87 GAKVTLRGKKMYDFLDKLINVALPRVRDFRGVSKTSFDGFGNFYTGIKEQIIFPEVDHDK 146
Query: 447 SIGIYGMD 470
I + GMD
Sbjct: 147 VIRLRGMD 154
>gb|AAD08795.1| (AF040101) ribosomal protein L5 [Aquifex pyrophilus]
Length = 203
Score = 64.3 bits (155), Expect = 1e-09
Identities = 44/120 (36%), Positives = 73/120 (60%), Gaps = 10/120 (8%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGD---RLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNE 281
NPM+ ++ K+V+N+ VGE+ +L RA + L ++GQ P+ ++AR + F +R+
Sbjct: 32 NPMQVPRLVKIVVNMGVGEAVQDIKQLERAVEDLRAITGQQPMITRARKSKAGFKLRKGM 91
Query: 282 KIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKY 440
I VT+R + L++ + +VK+++ L R+F GN+ FGI+E I I Y
Sbjct: 92 PIGCKVTLRNHTMWDFLDKVISVALPRVKDFKGLNPRSFDGRGNYAFGIAEQIVFPEIDY 151
Query: 441 DPSIGIYGMD 470
D I GMD
Sbjct: 152 DKVDRIRGMD 161
>sp|P02389|RL5_ECOLI 50S RIBOSOMAL PROTEIN L5
pir||R5EC5 ribosomal protein L5 [validated] - Escherichia coli
emb|CAA25717.1| (X01563) L5 (rp1E) (aa 1-179) [Escherichia coli]
gb|AAA58105.1| (U18997) 50S ribosomal subunit protein L5 [Escherichia coli]
gb|AAC76333.1| (AE000408) 50S ribosomal subunit protein L5 [Escherichia coli K12]
gb|AAG58429.1|AE005556_22 (AE005556) 50S ribosomal subunit protein L5 [Escherichia coli
O157:H7 EDL933]
dbj|BAB37596.1| (AP002564) 50S ribosomal subunit protein L5 [Escherichia coli
O157:H7]
Length = 179
Score = 63.9 bits (154), Expect = 2e-09
Identities = 48/147 (32%), Positives = 81/147 (54%), Gaps = 10/147 (6%)
Frame = +3
Query: 30 LRQLHDLRQVPSPGRLITAAMASEKANNPMRELKIQKLVLNISVGES-GDR--LTRAAKV 200
+ +LHD + ++ M N+ M+ +++K+ LN+ VGE+ D+ L AA
Sbjct: 1 MAKLHDYYK----DEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAAD 56
Query: 201 LEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGL-----KVKEYE- 362
L +SGQ P+ +KAR +V F IR+ I VT+RG + E ER + +++++
Sbjct: 57 LAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRG 116
Query: 363 LRKRNFSETGNFGFGISEHIDL-GIKYDPSIGIYGMD 470
L ++F GN+ G+ E I I YD + G+D
Sbjct: 117 LSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLD 153
>pir||B72727 hypothetical protein APE0355 - Aeropyrum pernix (strain K1)
dbj|BAA79310.1| (AP000059) 165aa long hypothetical protein [Aeropyrum pernix]
Length = 165
Score = 63.5 bits (153), Expect = 2e-09
Identities = 51/128 (39%), Positives = 58/128 (44%), Gaps = 1/128 (0%)
Frame = -3
Query: 469 SMP*IPIEGSYLIPR-SMCSLIPKPKLPVSEKXXXXXXXXXXXXXXXRISSALGPRTVTW 293
SMP IP GSY P MCS IPK LP S R A PR+VT
Sbjct: 6 SMPSIPTLGSYFTPGIRMCSSIPKETLPCSSILLVFILWPTASNALLRKFKAFSPRSVTM 65
Query: 292 TAIFSLRRIPKVRTV*RALL*TGVCPESCSRTLAARVSLSPDSPTEMFRTSF*IFSSRMG 113
TA+FS P V A TG P S SRT AA SLSP P M +F I +G
Sbjct: 66 TAMFSPFLTPNALIVLLAFRKTGFWPVSSSRTSAALWSLSPLWPMLMLTVTFTILGLLIG 125
Query: 112 LFAFSEAMA 86
L S +++
Sbjct: 126 LLFHSSSIS 134
>dbj|BAA25831.1| (AB007171) ribosomal protein L11 [Homo sapiens]
Length = 36
Score = 62.8 bits (151), Expect = 4e-09
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +3
Query: 132 IQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSK 239
I+KL LNI VGESGDRLTRAAKVLEQL+GQTPV+SK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>dbj|BAB43330.1| (AP003136) 50S ribosomal protein L5 [Staphylococcus aureus subsp.
aureus N315]
dbj|BAB58400.1| (AP003364) 50S ribosomal protein L5 [Staphylococcus aureus subsp.
aureus Mu50]
Length = 179
Score = 62.4 bits (150), Expect = 5e-09
Identities = 39/114 (34%), Positives = 69/114 (60%), Gaps = 10/114 (8%)
Frame = +3
Query: 129 KIQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHV 299
KI K+V+N+ VG++ L A + LE ++GQ P+ +KA+ ++ TF +R I V
Sbjct: 30 KIDKIVVNMGVGDAVQNSKVLDNAVEELELITGQKPLVTKAKKSIATFRLREGMPIGAKV 89
Query: 300 TVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKYDPSIGI 458
T+RG + E L++ + +V++++ + K+ F GN+ G+ E + I YD +
Sbjct: 90 TLRGERMYEFLDKLISVSLPRVRDFQGVSKKAFDGRGNYTLGVKEQLIFPEIDYDKVSKV 149
Query: 459 YGMD 470
GMD
Sbjct: 150 RGMD 153
>pir||D82718 50S ribosomal protein L5 XF1164 [imported] - Xylella fastidiosa
(strain 9a5c)
gb|AAF83974.1|AE003950_24 (AE003950) 50S ribosomal protein L5 [Xylella fastidiosa 9a5c]
Length = 179
Score = 62.0 bits (149), Expect = 6e-09
Identities = 42/121 (34%), Positives = 67/121 (54%), Gaps = 10/121 (8%)
Frame = +3
Query: 108 NNPMRELKIQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRN 278
+NPM ++ K+ LN+ VGE+ L A + ++SGQ P+ +K+R +V +F IR
Sbjct: 23 SNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 82
Query: 279 EKIAVHVTVRGPKAEEILERGLK-----VKEYE-LRKRNFSETGNFGFGISEHIDL-GIK 437
I T+R K E L+R + V+++ + R+F GNF G+ E + I
Sbjct: 83 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 142
Query: 438 YDPSIGIYGMD 470
+D I GMD
Sbjct: 143 FDAVDAIRGMD 153
>emb|CAA79789.1| (Z21677) ribosomal protein L5 [Thermotoga maritima]
Length = 184
Score = 61.2 bits (147), Expect = 1e-08
Identities = 37/116 (31%), Positives = 67/116 (56%), Gaps = 9/116 (7%)
Frame = +3
Query: 75 LITAAMASEKANNPMRELKIQKLVLNISVGESG---DRLTRAAKVLEQLSGQTPVYSKAR 245
++ A M N + K+ K+V+N+ +GE D + R A L +++GQ P+ ++AR
Sbjct: 16 IVPALMKELNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRAR 75
Query: 246 YTVRTFGIRRNEKIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFG 407
++ F IR+ I + VT+RG + L + + KV+++ L +F GN+ FG
Sbjct: 76 KSISNFKIRKGMPIGLKVTLRGARMYSFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFG 135
Query: 408 ISEHI 422
+SE +
Sbjct: 136 LSEQL 140
>sp|P38517|RL5_THEMA 50S RIBOSOMAL PROTEIN L5
pir||H72248 ribosomal protein L5 - Thermotoga maritima (strain MSB8)
gb|AAD36554.1|AE001798_19 (AE001798) ribosomal protein L5 [Thermotoga maritima]
Length = 184
Score = 61.2 bits (147), Expect = 1e-08
Identities = 37/116 (31%), Positives = 67/116 (56%), Gaps = 9/116 (7%)
Frame = +3
Query: 75 LITAAMASEKANNPMRELKIQKLVLNISVGESG---DRLTRAAKVLEQLSGQTPVYSKAR 245
++ A M N + K+ K+V+N+ +GE D + R A L +++GQ P+ ++AR
Sbjct: 16 IVPALMKEFNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRAR 75
Query: 246 YTVRTFGIRRNEKIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFG 407
++ F IR+ I + VT+RG + L + + KV+++ L +F GN+ FG
Sbjct: 76 KSISNFKIRKGMPIGLKVTLRGARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFG 135
Query: 408 ISEHI 422
+SE +
Sbjct: 136 LSEQL 140
>pir||S40200 ribosomal protein L5 - Thermotoga maritima
Length = 184
Score = 61.2 bits (147), Expect = 1e-08
Identities = 37/116 (31%), Positives = 67/116 (56%), Gaps = 9/116 (7%)
Frame = +3
Query: 75 LITAAMASEKANNPMRELKIQKLVLNISVGESG---DRLTRAAKVLEQLSGQTPVYSKAR 245
++ A M N + K+ K+V+N+ +GE D + R A L +++GQ P+ ++AR
Sbjct: 16 IVPALMKELNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRAR 75
Query: 246 YTVRTFGIRRNEKIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFG 407
++ F IR+ I + VT+RG + L + + KV+++ L +F GN+ FG
Sbjct: 76 KSISNFKIRKGMPIGLKVTLRGARMYSFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFG 135
Query: 408 ISEHI 422
+SE +
Sbjct: 136 LSEQL 140
>sp|P08895|RL5_BACST 50S RIBOSOMAL PROTEIN L5
pir||R5BS5F ribosomal protein L5 - Bacillus stearothermophilus
Length = 179
Score = 60.8 bits (146), Expect = 1e-08
Identities = 42/132 (31%), Positives = 73/132 (54%), Gaps = 10/132 (7%)
Frame = +3
Query: 75 LITAAMASEKANNPMRELKIQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKAR 245
++ A M+ + M+ KI+K+V+N+ VG++ L A + L ++GQ PV ++A+
Sbjct: 12 VVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAK 71
Query: 246 YTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYELR------KRNFSETGNFGFG 407
++ F +R+ I VT+RG + E L++ + V +R K+ F GN+ G
Sbjct: 72 KSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKKAFDGRGNYTLG 131
Query: 408 ISEHIDL-GIKYDPSIGIYGMD 470
I E + I YD + GMD
Sbjct: 132 IKEQLIFPEIDYDKVNKVRGMD 153
>sp|Q9Z9K2|RL5_BACHD 50S RIBOSOMAL PROTEIN L5
pir||T44395 ribosomal protein L5 [imported] - Bacillus halodurans
dbj|BAA75283.1| (AB017508) rplE homologue (identity of 86% to B. subtilis )
[Bacillus halodurans]
dbj|BAB03865.1| (AP001507) 50S ribosomal protein L5 [Bacillus halodurans]
Length = 179
Score = 60.5 bits (145), Expect = 2e-08
Identities = 37/114 (32%), Positives = 66/114 (57%), Gaps = 10/114 (8%)
Frame = +3
Query: 129 KIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHV 299
K++K+V+N+ VG++ L +A + L +++GQ P+ +KA+ ++ F +R I V
Sbjct: 30 KLEKIVVNMGVGDAVQNAKALDKAVEELTEITGQKPIITKAKKSIAGFKLREGMPIGAKV 89
Query: 300 TVRGPKAEEILERGLKVKEYELR------KRNFSETGNFGFGISEHIDL-GIKYDPSIGI 458
T+RG + E L++ + V +R K+ F GN+ G+ E + I YD +
Sbjct: 90 TLRGERMYEFLDKLISVSLPRVRDFRGISKKAFDGRGNYTLGVKEQLIFPEIDYDKVDKV 149
Query: 459 YGMD 470
GMD
Sbjct: 150 RGMD 153
>sp|O52344|RL5_MYCGA 50S RIBOSOMAL PROTEIN L5
gb|AAB95399.1| (AF036708) ribosomal protein L5 [Mycoplasma gallisepticum]
Length = 185
Score = 59.7 bits (143), Expect = 3e-08
Identities = 47/118 (39%), Positives = 70/118 (58%), Gaps = 14/118 (11%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDRLTRAAKVLE-------QLSGQTPVYSKARYTVRTFGIRR 275
M+ KI+K+V+N+ VG++ T+ AK+LE +SGQ PV +KA + +F IR+
Sbjct: 25 MQVPKIEKIVINMGVGDA----TKDAKLLELAQAELQAISGQKPVITKAHSSNASFKIRQ 80
Query: 276 NEKIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GI 434
+ I VT+RG K LE+ + +V+++ L R F GN+ GI E I I
Sbjct: 81 GQAIGCKVTLRGEKMWNFLEKLINIALPRVRDFRGLSNRAFDARGNYTLGIKEQIIFPEI 140
Query: 435 KYDPSIGIYGMD 470
YD I G D
Sbjct: 141 IYDNVKKIRGFD 152
>sp|P12877|RL5_BACSU 50S RIBOSOMAL PROTEIN L5 (BL6)
pir||R5BS5 ribosomal protein L5 - Bacillus subtilis
emb|CAA33703.1| (X15664) L5 protein (AA 1-179) [Bacillus subtilis]
gb|AAB06811.1| (L47971) ribosomal protein L5 [Bacillus subtilis]
emb|CAB11904.1| (Z99104) ribosomal protein L5 (BL6) [Bacillus subtilis]
Length = 179
Score = 59.7 bits (143), Expect = 3e-08
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Frame = +3
Query: 84 AAMASEKANNPMRELKIQKLVLNISVGESGDRLTRAAKVLEQLS---GQTPVYSKARYTV 254
A M ++ M+ KI+K+V+N+ VG++ +E+L+ GQ PV ++A+ ++
Sbjct: 15 ALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAIDSAVEELTFIAGQKPVVTRAKKSI 74
Query: 255 RTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYELR------KRNFSETGNFGFGISE 416
F +R I VT+RG + + L++ + V +R K++F GN+ GI E
Sbjct: 75 AGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKE 134
Query: 417 HIDL-GIKYDPSIGIYGMD 470
+ I YD + GMD
Sbjct: 135 QLIFPEIDYDKVTKVRGMD 153
>sp|P57579|RL5_BUCAI 50S RIBOSOMAL PROTEIN L5
dbj|BAB13205.1| (AP001119) 50S ribosomal protein L5 [Buchnera sp. APS]
Length = 179
Score = 59.3 bits (142), Expect = 4e-08
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Frame = +3
Query: 72 RLITAAMASEKANNPMRELKIQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKA 242
++IT M ++ M+ KI K+ LN+ VG + L A L +SGQ P+ +KA
Sbjct: 11 KVITQLMHELNYSSVMQVPKIDKITLNMGVGGAASDKKILDNAILDLTAISGQKPLITKA 70
Query: 243 RYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGF 404
R +V F IR+ I VT+RG K ER + +++++ L +F GN+
Sbjct: 71 RKSVAGFKIRQGYPIGCKVTLRGQKKWHFFERLIIIAVPRIRDFRGLSSHSFDGQGNYSL 130
Query: 405 GISEHIDL-GIKYDPSIGIYGMD 470
GI E I I YD + G+D
Sbjct: 131 GIREQIIFPEIDYDKIDRVRGLD 153
>pir||B82058 ribosomal protein L5 VC2584 [imported] - Vibrio cholerae (group O1
strain N16961)
gb|AAF95725.1| (AE004326) ribosomal protein L5 [Vibrio cholerae]
Length = 179
Score = 59.3 bits (142), Expect = 4e-08
Identities = 43/118 (36%), Positives = 70/118 (58%), Gaps = 10/118 (8%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKI 287
M+ +I+K+ LN+ VGE+ D+ L AA + +SGQ P+ +KAR +V F IR I
Sbjct: 26 MQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGYPI 85
Query: 288 AVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKYDP 446
VT+RG + + LER + +V+++ + ++F GN+ G+ E I I YD
Sbjct: 86 GCKVTLRGERMWDFLERLISIALPRVRDFRGVNGKSFDGRGNYSMGVREQIIFPEIDYDK 145
Query: 447 SIGIYGMD 470
+ G+D
Sbjct: 146 VDRVRGLD 153
>emb|CAB82082.1| (AL161803) 50S ribosomal protein L5 [Streptomyces coelicolor A3(2)]
Length = 185
Score = 58.9 bits (141), Expect = 5e-08
Identities = 34/104 (32%), Positives = 63/104 (59%), Gaps = 9/104 (8%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESG---DRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNE 281
N M+ + K+V+N+ VG++ + A + L ++GQ P +KAR ++ F +R +
Sbjct: 29 NVMQIPGLVKIVVNMGVGDAARDSKLIEGAIRDLTTITGQKPAVTKARKSIAQFKLREGQ 88
Query: 282 KIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHI 422
I HVT+RG + E L+R L +++++ L + F GN+ FG++E +
Sbjct: 89 PIGAHVTLRGDRMWEFLDRTLSLALPRIRDFRGLSPKQFDGRGNYTFGLTEQV 141
>sp|P44346|RL5_HAEIN 50S RIBOSOMAL PROTEIN L5
pir||H64093 ribosomal protein L5 - Haemophilus influenzae (strain Rd KW20)
gb|AAC22448.1| (U32762) ribosomal protein L5 (rpL5) [Haemophilus influenzae Rd]
Length = 179
Score = 58.9 bits (141), Expect = 5e-08
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKI 287
M+ +I+K+ LN+ VGE+ L A L +SGQ P+ +KAR +V F IR+ I
Sbjct: 26 MQVPRIEKITLNMGVGEALTDKKLLDNAVADLAAISGQKPLVTKARKSVAGFKIRQGYPI 85
Query: 288 AVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKYDP 446
VT+RG + E ER + +++++ L ++F GN+ G+ E I I YD
Sbjct: 86 GCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDK 145
Query: 447 SIGIYGMD 470
+ G+D
Sbjct: 146 VDRVRGLD 153
>gb|AAK03487.1| (AE006177) RpL5 [Pasteurella multocida]
Length = 179
Score = 58.9 bits (141), Expect = 5e-08
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKI 287
M+ +I+K+ LN+ VGE+ L A L +SGQ P+ +KAR +V F IR+ I
Sbjct: 26 MQVPRIEKITLNMGVGEALTDKKLLDNAVADLAAISGQKPLITKARKSVAGFKIRQGYPI 85
Query: 288 AVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKYDP 446
VT+RG + E ER + +++++ L ++F GN+ G+ E I I YD
Sbjct: 86 GCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDK 145
Query: 447 SIGIYGMD 470
+ G+D
Sbjct: 146 VDRVRGLD 153
>gb|AAK33194.1| (AE006478) 50S ribosomal protein L5 [Streptococcus pyogenes M1 GAS]
Length = 180
Score = 58.2 bits (139), Expect = 9e-08
Identities = 37/114 (32%), Positives = 65/114 (56%), Gaps = 10/114 (8%)
Frame = +3
Query: 129 KIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHV 299
K++K+VLN+ VG++ L +AA L +SGQ P+ +KA+ ++ F +R I V
Sbjct: 31 KVEKIVLNMGVGDAVSNAKNLEKAAAELALISGQKPLITKAKKSIAGFRLREGVAIGAKV 90
Query: 300 TVRGPKAEEILERGLKVKEYELR------KRNFSETGNFGFGISEHIDL-GIKYDPSIGI 458
T+RG + E L++ + V +R ++F GN+ G+ E + I +D +
Sbjct: 91 TLRGERMYEFLDKLVSVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEISFDDVDKV 150
Query: 459 YGMD 470
G+D
Sbjct: 151 RGLD 154
>gb|AAK06185.1|AE006437_15 (AE006437) 50S ribosomal protein L5 [Lactococcus lactis subsp.
lactis]
Length = 180
Score = 57.4 bits (137), Expect = 2e-07
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Frame = +3
Query: 129 KIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHV 299
K+ K+V+N+ VG++ L +A L +SGQ P+ +KA+ +V F +R I V
Sbjct: 31 KVDKIVINMGVGDAVNNSKNLDKAVAELALISGQKPLITKAKKSVAAFRLREGMPIGAKV 90
Query: 300 TVRGPKAEEILERGLKVKEYELR------KRNFSETGNFGFGISEHIDL-GIKYDPSIGI 458
T+RG + E L++ + V +R + F GN+ G+ E + I YD +
Sbjct: 91 TLRGERMFEFLDKLVTVSLPRVRDFHGVSNKAFDGRGNYTLGVKEQLIFPEINYDDVDKV 150
Query: 459 YGMD 470
GMD
Sbjct: 151 RGMD 154
>sp|P33098|RL5_MICLU 50S RIBOSOMAL PROTEIN L5
pir||S29884 Ribosomal protein L5 - Micrococcus luteus
emb|CAA35560.1| (X17524) L5 protein [Micrococcus luteus]
Length = 191
Score = 56.6 bits (135), Expect = 3e-07
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Frame = +3
Query: 111 NPMRELKIQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNE 281
N M+ + K+V+N+ VGE+ + A L ++GQ P+ +KAR ++ F +R
Sbjct: 34 NVMQVPGLVKVVVNMGVGEAAKDSKIIDDAVTDLTAITGQKPMITKARKSIAQFKLREGM 93
Query: 282 KIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEH-IDLGIKY 440
I H T+RG + E L+R + +++++ L R F GN+ FG+SE + I
Sbjct: 94 PIGTHATLRGDRMWEFLDRLVTLPLPRIRDFRGLSDRQFDGNGNYTFGLSEQTVFHEIDQ 153
Query: 441 DPSIGIYGMD 470
D + GMD
Sbjct: 154 DKIDRVRGMD 163
>pir||T01713 ribosomal protein L5, organellar - Arabidopsis thaliana
gb|AAB61015.1| (AF007269) belongs to the L5P family of ribosomal proteins
[Arabidopsis thaliana]
emb|CAB80940.1| (AL161491) putative L5 ribosomal protein [Arabidopsis thaliana]
Length = 262
Score = 56.6 bits (135), Expect = 3e-07
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 10/133 (7%)
Frame = +3
Query: 72 RLITAAMASEKANNPMRELKIQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKA 242
R+I A K N + K+QK+V+N +G++ L A K + ++GQ P+ ++A
Sbjct: 66 RIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRA 125
Query: 243 RYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGF 404
R ++ TF IR ++ + + VT+RG L+R + + ++++ + +F GN+
Sbjct: 126 RASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSI 185
Query: 405 GISEH-IDLGIKYDPSIGIYGMD 470
G+ + + I++D GMD
Sbjct: 186 GVKDQGVFPEIRFDAVGKTRGMD 208
>sp|O51443|RL5_BORBU 50S RIBOSOMAL PROTEIN L5
pir||A70161 ribosomal protein L5 (rplE) - Lyme disease spirochete
gb|AAC66852.1| (AE001152) ribosomal protein L5 (rplE) [Borrelia burgdorferi]
Length = 182
Score = 55.8 bits (133), Expect = 5e-07
Identities = 41/118 (34%), Positives = 68/118 (56%), Gaps = 10/118 (8%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKI 287
M+ K++K+V+++ VGE+ L A L Q++GQ V +KA+ + F IR+ ++I
Sbjct: 29 MQVPKLEKIVISVGVGEAVRNKKLLDSAVLELAQITGQKAVKTKAKKAIAGFKIRQGQEI 88
Query: 288 AVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDLG-IKYDP 446
VT+RG E L + + +VK++ + F GN+ FGI+E I I YD
Sbjct: 89 GAKVTLRGNAMYEFLYKLIHLALPRVKDFRGINGDAFDGNGNYSFGITEQIIFSEIDYDK 148
Query: 447 SIGIYGMD 470
I G++
Sbjct: 149 IERISGLN 156
>ref|NP_109865.1| ribosomal protein L5 [Mycoplasma pneumoniae]
sp|Q50306|RL5_MYCPN 50S RIBOSOMAL PROTEIN L5
pir||S62829 ribosomal protein L5 - Mycoplasma pneumoniae (strain ATCC 29342)
pir||S73980 ribosomal protein L5 - Mycoplasma pneumoniae (SGC3) (ATCC 29342)
gb|AAC43704.1| (U34795) RplE [Mycoplasma pneumoniae]
gb|AAB96302.1| (AE000061) ribosomal protein L5 [Mycoplasma pneumoniae]
Length = 180
Score = 55.5 bits (132), Expect = 6e-07
Identities = 40/118 (33%), Positives = 67/118 (55%), Gaps = 10/118 (8%)
Frame = +3
Query: 117 MRELKIQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKI 287
M+ +++K+V+N+ VG++ L A L +SGQ PV +KA+ + T+ +R + I
Sbjct: 26 MQVPRLEKIVINMGVGDAIRDSKFLESALNELHLISGQKPVATKAKNAISTYKLRAGQLI 85
Query: 288 AVHVTVRGPKAEEILERGL-----KVKEYE-LRKRNFSETGNFGFGISEHIDL-GIKYDP 446
VT+RG + LE+ + +V+++ L ++F GN+ GI E I I YD
Sbjct: 86 GCKVTLRGERMWAFLEKLIYVALPRVRDFRGLSLKSFDGRGNYTIGIKEQIIFPEIVYDD 145
Query: 447 SIGIYGMD 470
I G D
Sbjct: 146 IKRIRGFD 153
>ref|NP_041920.1|<