Score E
Sequences producing significant alignments: (bits) Value
sp|O16005|OPSD_SEPOF RHODOPSIN >gi|2290717|gb|AAC26329.1| (... 37 0.24
gb|AAC27436.1| (L47533) rhodopsin [Sepia officinalis] 37 0.24
gb|AAB94054.2| (AF017178) pro alpha 1(I) collagen [Homo sap... 34 1.2
gb|AAA51995.1| (K01228) alpha 1 (I) chain propeptide [Homo ... 34 1.2
ref|NP_000079.1| collagen, type I, alpha 1; Collagen I, alp... 34 1.2
pir||CGHU1S collagen alpha 1(I) chain precursor - human 34 1.2
sp|P02452|CA11_HUMAN COLLAGEN ALPHA 1(I) CHAIN PRECURSOR 34 1.2
ref|XP_012651.2| similar to collagen, type I, alpha 1; Coll... 34 1.2
emb|CAA67261.1| (X98705) collagen type I alpha 1 [Homo sapi... 34 1.2
emb|CAA76180.1| (Y16346) COL1A1 and PDGFB fusion transcript... 34 1.2
pir||C38355 basic proline-rich peptide II-2 - human 33 2.0
gb|AAA37333.1| (M14423) pro-alpha-1 type I collagen [Mus mu... 33 2.6
pir||A05269 collagen alpha 1(III) chain precursor - chicken... 33 2.6
sp|P11087|CA11_MOUSE COLLAGEN ALPHA 1(I) CHAIN PRECURSOR >g... 33 2.6
emb|CAB01633.1| (Z78279) Collagen alpha1 [Rattus norvegicus] 33 2.6
gb|AAA37334.1| (M17491) procollagen type I alpha chain [Mus... 33 2.6
gb|AAH03198.1|AAH03198 (BC003198) Unknown (protein for IMAG... 33 2.6
dbj|BAA34502.1| (AB018325) KIAA0782 protein [Homo sapiens] 33 3.4
sp|P33477|ANXB_RABIT ANNEXIN A11 (ANNEXIN XI) (CALCYCLIN-AS... 33 3.4
prf||2005409A rhodopsin [Loligo subulata] 33 3.4
sp|P19198|CAP1_DICDI CAMP BINDING PROTEIN CABP1A/CABP1B (CA... 33 3.4
pir||S13497 cAMP-binding protein - slime mold (Dictyosteliu... 33 3.4
pir||S60755 rhodopsin - Alloteuthis subulata (fragment) 33 3.4
pir||S60756 rhodopsin - Alloteuthis subulata 33 3.4
gb|AAF55102.1| (AE003706) CG14858 gene product [Drosophila ... 33 3.4
gb|AAG50730.1|AC079041_23 (AC079041) hypothetical protein [... 33 3.4
emb|CAB38633.1| (X52688) CABP1 protein [Dictyostelium disco... 33 3.4
gb|AAF55457.1| (AE003718) osa gene product [Drosophila mela... 32 4.4
ref|NP_113627.1| hypothetical protein MGC10895 [Homo sapien... 32 4.4
pir||T00329 hypothetical protein KIAA0553 - human (fragment... 32 4.4
sp|O53426|PRA_MYCTU PROLINE-RICH ANTIGEN HOMOLOG >gi|747882... 32 4.4
sp|Q9UKJ3|Y553_HUMAN HYPOTHETICAL PROTEIN KIAA0553 >gi|6103... 32 4.4
sp|P25304|AGRI_RAT AGRIN PRECURSOR >gi|279665|pir||AGRT agr... 32 4.4
gb|AAA40702.1| (M64780) agrin [Rattus norvegicus] 32 4.4
pir||T13049 eyelid - fruit fly (Drosophila melanogaster) >g... 32 4.4
emb|CAA74577.1| (Y14166) attachment region binding protein ... 32 4.4
gb|AAA40703.1| (M64780) agrin [Rattus norvegicus] 32 4.4
gb|AAF50995.2| (AE003575) CG15635 gene product [Drosophila ... 32 4.4
sp|P04474|PRP3_RAT ACIDIC PROLINE-RICH PROTEIN PRP33 PRECUR... 32 4.4
pir||CGBO1S collagen alpha 1(I) chain - bovine (tentative s... 32 5.8
ref|NP_113687.1| proline rich protein 2 [Mus musculus] >gi|... 32 5.8
pir||D29149 proline-rich protein - mouse (fragment) >gi|200... 32 5.8
sp||CA11_BOVIN_2 [Segment 2 of 2] COLLAGEN ALPHA 1(I) CHAIN 32 5.8
sp|Q01456|OAM_ASCSU OVARIAN ABUNDANT MESSAGE PROTEIN (OAM P... 32 5.8
emb|CAB61840.1| (AJ242804) putative glycine and proline-ric... 32 5.8
emb|CAB94564.1| (AL359152) putative ABC transporter ATP-bin... 32 5.8
sp|P05143|PRP3_MOUSE PROLINE-RICH PROTEIN MP-3 >gi|200549|g... 32 5.8
gb|AAB63335.3| (U83658) FH1/FH2 protein homolog [Aspergillu... 32 7.6
sp|P22357|ASF1_HELAN ANTHER-SPECIFIC PROTEIN SF18 PRECURSOR... 32 7.6
sp|P02812|PRP2_HUMAN SALIVARY PROLINE-RICH PROTEIN PRECURSO... 32 7.6
gb|AAF37297.1|AF232239_1 (AF232239) HES-related repressor p... 32 7.6
ref|NP_036390.1| hairy/enhancer-of-split related with YRPW ... 32 7.6
ref|NP_043392.1| putative [Human papillomavirus type 36] >g... 32 7.6
sp|P39770|SALM_DROME HOMEOTIC PROTEIN SPALT-MAJOR >gi|21337... 32 7.6
pir||S46272 anther-specific protein - common sunflower 32 7.6
gb|AAG46118.1|AC073166_16 (AC073166) putative protein phosp... 32 7.6
emb|CAA68709.1| (Y00724) prepro-alpha-2 chain [Homo sapiens] 32 7.6
gb|AAF53097.1| (AE003632) salm gene product [Drosophila mel... 32 7.6
pir||CGHU2S collagen alpha 2(I) chain precursor - human 32 7.6
gb|AAB50686.1| (S80905) Con1 [Homo sapiens] 32 7.6
ref|XP_004658.3| collagen, type I, alpha 2 [Homo sapiens] >... 32 7.6
sp|P08123|CA21_HUMAN COLLAGEN ALPHA 2(I) CHAIN PRECURSOR >g... 32 7.6
pir||T26281 hypothetical protein W08D2.6 - Caenorhabditis e... 32 7.6
pir||JT0754 extensin-like protein - potato >gi|629719|pir||... 31 9.9
sp|Q9XSJ7|CA11_CANFA COLLAGEN ALPHA 1(I) CHAIN PRECURSOR >g... 31 9.9
gb|AAK38272.1|AF330197_1 (AF330197) Arkadia [Mus musculus] 31 9.9
pir||S23447 annexin XI form B - bovine >gi|78|emb|CAA77801.... 31 9.9
gb|AAD43607.1|AC005698_6 (AC005698) T3P18.6 [Arabidopsis th... 31 9.9
sp|P27214|ANXB_BOVIN ANNEXIN A11 (ANNEXIN XI) (CALCYCLIN-AS... 31 9.9
emb|CAB60182.1| (AL132824) hypothetical protein SCAH10.28 [... 31 9.9
pir||JH0481 basic proline-rich protein MnP4 - crab-eating m... 31 9.9
sp|P13983|EXTN_TOBAC EXTENSIN PRECURSOR (CELL WALL HYDROXYP... 31 9.9
pir||I50694 collagen alpha 1(III) chain - chicken (fragment... 31 9.9
pir||A70525 hypothetical protein Rv0312 - Mycobacterium tub... 31 9.9
gb|AAB51284.1| (U91682) vitelline membrane protein homolog ... 31 9.9
gb|AAK31343.1|AF348329_1 (AF348329) Brahma-associated prote... 31 9.9
gb|AAF46136.1| (AE003437) Spx gene product [Drosophila mela... 31 9.9
gb|AAF46450.1| (AE003446) CG7055 gene product [Drosophila m... 31 9.9
sp|P34304|YKQ9_CAEEL HYPOTHETICAL 70.5 KD PROTEIN C06E1.9 I... 31 9.9
pir||D70509 hypothetical protein Rv1233c - Mycobacterium tu... 31 9.9
gb|AAD54275.1|AF169793_1 (AF169793) HET-C protein [Podospor... 31 9.9
gb|AAK45529.1| (AE007003) hypothetical protein [Mycobacteri... 31 9.9
gb|AAF34753.1|AF217845_1 (AF217845) DESERT [Drosophila mela... 31 9.9
emb|CAA65831.1| (X97197) spliceosomal protein [Drosophila m... 31 9.9
>sp|O16005|OPSD_SEPOF RHODOPSIN
gb|AAC26329.1| (AF000947) rhodopsin [Sepia officinalis]
Length = 464
Score = 36.6 bits (83), Expect = 0.24
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +3
Query: 51 AVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
A YPP +P P GG P G PPP ++GG PQG P
Sbjct: 385 AAYPPQGAYP-PQGGYPPQGYPPPP----AQGGYPPQGYPP 420
Score = 34.7 bits (78), Expect = 0.90
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 57 YPPHTYHPVPS-GGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
YPP Y P P+ GG P G PPP G PQG P
Sbjct: 399 YPPQGYPPPPAQGGYPPQGYPPPPQGYPPAQGYPPQGYPP 438
>gb|AAC27436.1| (L47533) rhodopsin [Sepia officinalis]
Length = 357
Score = 36.6 bits (83), Expect = 0.24
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +3
Query: 51 AVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
A YPP +P P GG P G PPP ++GG PQG P
Sbjct: 278 AAYPPQGAYP-PQGGYPPQGYPPPP----AQGGYPPQGYPP 313
Score = 34.7 bits (78), Expect = 0.90
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 57 YPPHTYHPVPS-GGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
YPP Y P P+ GG P G PPP G PQG P
Sbjct: 292 YPPQGYPPPPAQGGYPPQGYPPPPQGYPPAQGYPPQGYPP 331
>gb|AAB94054.2| (AF017178) pro alpha 1(I) collagen [Homo sapiens]
Length = 1461
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK P+GE
Sbjct: 883 PGPSGNAGPPG---PPGPAGKEGGKGPRGE 909
>gb|AAA51995.1| (K01228) alpha 1 (I) chain propeptide [Homo sapiens]
Length = 1040
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK P+GE
Sbjct: 462 PGPSGNAGPPG---PPGPAGKEGGKGPRGE 488
>ref|NP_000079.1| collagen, type I, alpha 1; Collagen I, alpha-1 polypeptide [Homo
sapiens]
emb|CAA98968.1| (Z74615) prepro-alpha1(I) collagen [Homo sapiens]
Length = 1464
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK P+GE
Sbjct: 886 PGPSGNAGPPG---PPGPAGKEGGKGPRGE 912
>pir||CGHU1S collagen alpha 1(I) chain precursor - human
Length = 1464
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK P+GE
Sbjct: 886 PGPSGNAGPPG---PPGPAGKEGGKGPRGE 912
>sp|P02452|CA11_HUMAN COLLAGEN ALPHA 1(I) CHAIN PRECURSOR
Length = 1464
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK P+GE
Sbjct: 886 PGPSGNAGPPG---PPGPAGKEGGKGPRGE 912
>ref|XP_012651.2| similar to collagen, type I, alpha 1; Collagen I, alpha-1
polypeptide (H. sapiens) [Homo sapiens]
Length = 1106
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK P+GE
Sbjct: 886 PGPSGNAGPPG---PPGPAGKEGGKGPRGE 912
>emb|CAA67261.1| (X98705) collagen type I alpha 1 [Homo sapiens]
Length = 1069
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK P+GE
Sbjct: 886 PGPSGNAGPPG---PPGPAGKEGGKGPRGE 912
>emb|CAA76180.1| (Y16346) COL1A1 and PDGFB fusion transcript [Homo sapiens]
Length = 77
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK P+GE
Sbjct: 6 PGPSGNAGPPG---PPGPAGKEGGKGPRGE 32
>pir||C38355 basic proline-rich peptide II-2 - human
Length = 76
Score = 33.5 bits (75), Expect = 2.0
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGS----EGGKTPQGEQP 173
P P GG P G PPPP +GG PQG P
Sbjct: 23 PSPQGGNKPQGPPPPPPGKPQGPPPQGGNKPQGPPP 58
>gb|AAA37333.1| (M14423) pro-alpha-1 type I collagen [Mus musculus]
prf||1202297A collagen alpha1(I),pro [Mus musculus]
Length = 611
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/30 (56%), Positives = 18/30 (59%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP G EGGK P+GE
Sbjct: 358 PGPSGNAGPPG---PPGPVGKEGGKGPRGE 384
>pir||A05269 collagen alpha 1(III) chain precursor - chicken (fragments)
Length = 615
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/41 (41%), Positives = 19/41 (45%)
Frame = +3
Query: 45 GTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
G + P P P G A P G PP +GS GGK GE
Sbjct: 96 GASGNPGERGEPGPQGQAGPPGPQGPPGRAGSPGGKGEMGE 136
>sp|P11087|CA11_MOUSE COLLAGEN ALPHA 1(I) CHAIN PRECURSOR
pir||S57243 collagen alpha 1(I) chain precursor - mouse
pir||S21626 collagen alpha 1(I) chain precursor - mouse
gb|AAA88912.1| (U08020) collagen pro-alpha-1 type I chain [Mus musculus]
Length = 1453
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/30 (56%), Positives = 18/30 (59%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP G EGGK P+GE
Sbjct: 875 PGPSGNAGPPG---PPGPVGKEGGKGPRGE 901
>emb|CAB01633.1| (Z78279) Collagen alpha1 [Rattus norvegicus]
Length = 1453
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/30 (56%), Positives = 18/30 (59%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP G EGGK P+GE
Sbjct: 875 PGPSGNAGPPG---PPGPVGKEGGKGPRGE 901
>gb|AAA37334.1| (M17491) procollagen type I alpha chain [Mus musculus]
Length = 396
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/30 (56%), Positives = 18/30 (59%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP G EGGK P+GE
Sbjct: 141 PGPSGNAGPPG---PPGPVGKEGGKGPRGE 167
>gb|AAH03198.1|AAH03198 (BC003198) Unknown (protein for IMAGE:3586143) [Mus musculus]
Length = 589
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/30 (56%), Positives = 18/30 (59%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP G EGGK P+GE
Sbjct: 11 PGPSGNAGPPG---PPGPVGKEGGKGPRGE 37
>dbj|BAA34502.1| (AB018325) KIAA0782 protein [Homo sapiens]
Length = 1179
Score = 32.7 bits (73), Expect = 3.4
Identities = 16/31 (51%), Positives = 19/31 (60%), Gaps = 8/31 (25%)
Frame = +3
Query: 66 HTYHPVPSGGAH--------PTGVAPPPPHSGSEGGKTP 158
H Y VP+GG H P+ +A P P G GG TP
Sbjct: 15 HAYEGVPNGGWHTSSLSLSLPSTIAAPHPMDGPPGGSTP 53
>sp|P33477|ANXB_RABIT ANNEXIN A11 (ANNEXIN XI) (CALCYCLIN-ASSOCIATED ANNEXIN 50) (CAP-50)
pir||LURB11 annexin XI - rabbit
dbj|BAA01705.1| (D10883) CAP-50 [Oryctolagus cuniculus]
Length = 503
Score = 32.7 bits (73), Expect = 3.4
Identities = 19/53 (35%), Positives = 24/53 (44%), Gaps = 7/53 (13%)
Frame = +3
Query: 15 YTVPVDHTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSG-------SEGGKTPQGEQP 173
Y P + +G YPP PVP P G PP P+ G + P G+QP
Sbjct: 105 YPPPGGNPPSGVPSYPPFPGAPVPGQPMPPPGHQPPGPYPGQLPVTYPGQSPVPPPGQQP 164
>prf||2005409A rhodopsin [Loligo subulata]
Length = 439
Score = 32.7 bits (73), Expect = 3.4
Identities = 17/39 (43%), Positives = 18/39 (45%)
Frame = +3
Query: 57 YPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
YPP Y P P G P G PPP +G PQG P
Sbjct: 389 YPPQGYPPPPPQGYPPQGY-PPPQGYPPQGYPPPQGPPP 426
>sp|P19198|CAP1_DICDI CAMP BINDING PROTEIN CABP1A/CABP1B (CABP1 PROTEIN)
pir||S11484 CABP1 protein - slime mold (Dictyostelium discoideum)
emb|CAA36913.1| (X52688) CABP1 protein [Dictyostelium discoideum]
gb|AAA33173.1| (M36176) cAMP binding protein [Dictyostelium discoideum]
Length = 333
Score = 32.7 bits (73), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 57 YPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
YPP P+G G P PP G+ GG PQ +QP
Sbjct: 51 YPPQQQQRPPTGAPQQPGGYPTPPPPGAPGGYPPQ-QQP 88
>pir||S13497 cAMP-binding protein - slime mold (Dictyostelium discoideum)
emb|CAA39445.1| (X55975) cyclic AMP-binding protein [Dictyostelium discoideum]
Length = 324
Score = 32.7 bits (73), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 57 YPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
YPP P+G G P PP G+ GG PQ +QP
Sbjct: 51 YPPQQQQRPPTGAPQQPGGYPTPPPPGAPGGYPPQ-QQP 88
>pir||S60755 rhodopsin - Alloteuthis subulata (fragment)
Length = 440
Score = 32.7 bits (73), Expect = 3.4
Identities = 17/39 (43%), Positives = 18/39 (45%)
Frame = +3
Query: 57 YPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
YPP Y P P G P G PPP +G PQG P
Sbjct: 389 YPPQGYPPPPPQGYPPQGY-PPPQGYPPQGYPPPQGPPP 426
>pir||S60756 rhodopsin - Alloteuthis subulata
Length = 440
Score = 32.7 bits (73), Expect = 3.4
Identities = 17/39 (43%), Positives = 18/39 (45%)
Frame = +3
Query: 57 YPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
YPP Y P P G P G PPP +G PQG P
Sbjct: 389 YPPQGYPPPPPQGYPPQGY-PPPQGYPPQGYPPPQGPPP 426
>gb|AAF55102.1| (AE003706) CG14858 gene product [Drosophila melanogaster]
Length = 3232
Score = 32.7 bits (73), Expect = 3.4
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +3
Query: 60 PPHTYHP---VPSGGAHPTGVAPPPPHSGSEGGKTPQGEQ 170
PP TYH +PS GA P VAPPP + S+ EQ
Sbjct: 290 PPSTYHRTKLLPSTGAPPPTVAPPPLNYESQTSSLASDEQ 329
>gb|AAG50730.1|AC079041_23 (AC079041) hypothetical protein [Arabidopsis thaliana]
gb|AAG60137.1|AC074360_2 (AC074360) hypothetical protein [Arabidopsis thaliana]
Length = 176
Score = 32.7 bits (73), Expect = 3.4
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = +3
Query: 33 HTNNGTAVYPPHTYHPVPSG-----GAHPTGVAPPPPH 131
H N+ YPP Y P P G G +P PPPPH
Sbjct: 16 HHNHHGHGYPPGAYPPPPQGAYPPPGGYPPQGYPPPPH 53
>emb|CAB38633.1| (X52688) CABP1 protein [Dictyostelium discoideum]
Length = 296
Score = 32.7 bits (73), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 57 YPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
YPP P+G G P PP G+ GG PQ +QP
Sbjct: 14 YPPQQQQRPPTGAPQQPGGYPTPPPPGAPGGYPPQ-QQP 51
>gb|AAF55457.1| (AE003718) osa gene product [Drosophila melanogaster]
Length = 2703
Score = 32.3 bits (72), Expect = 4.4
Identities = 18/38 (47%), Positives = 19/38 (49%), Gaps = 4/38 (10%)
Frame = +3
Query: 57 YPPHTYHPVPS--GGAHPTGVAPPPPHSGSEGG--KTPQGEQ 170
YPP Y P P GA+ TG PPP GG P G Q
Sbjct: 657 YPPGNYPPRPQYPPGAYATGPPPPPTSQAGAGGANSMPSGAQ 698
>ref|NP_113627.1| hypothetical protein MGC10895 [Homo sapiens]
gb|AAH04299.1|AAH04299 (BC004299) Similar to SRY-box containing gene 7 [Homo sapiens]
Length = 388
Score = 32.3 bits (72), Expect = 4.4
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 1/38 (2%)
Frame = +3
Query: 24 PVDHTNNGTAVYPPHTYHPVPSG-GAHPTGVAPPPPHSG 137
PV A Y P TYHP+ S AH ++PPP H G
Sbjct: 273 PVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPG 311
>pir||T00329 hypothetical protein KIAA0553 - human (fragment)
dbj|BAA25479.1| (AB011125) KIAA0553 protein [Homo sapiens]
Length = 1095
Score = 32.3 bits (72), Expect = 4.4
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 33 HTNNGTAVYP-PHTYHPVPSGGAHPTGVAPPP 125
H +A++P P T+HPVP +PT +AP P
Sbjct: 1033 HIIPASAIHPGPFTFHPVPHAALYPTLLAPRP 1064
>sp|O53426|PRA_MYCTU PROLINE-RICH ANTIGEN HOMOLOG
pir||D70894 probable pra protein - Mycobacterium tuberculosis (strain H37RV)
emb|CAA17194.1| (AL021897) pra [Mycobacterium tuberculosis]
gb|AAK45365.1| (AE006991) proline-rich antigen [Mycobacterium tuberculosis
CDC1551]
Length = 240
Score = 32.3 bits (72), Expect = 4.4
Identities = 18/34 (52%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Frame = +3
Query: 57 YPPHTYHPVPSGGAHPT--------GVAPPPPHSGSEGGKTP 158
YPP P PSGG P G APPPP S G P
Sbjct: 11 YPPPPPPPGPSGGHEPPPAAPPGGSGYAPPPPPSSGSGYPPP 52
>sp|Q9UKJ3|Y553_HUMAN HYPOTHETICAL PROTEIN KIAA0553
gb|AAF03681.1| (AF160252) KIAA0553 protein [Homo sapiens]
Length = 1089
Score = 32.3 bits (72), Expect = 4.4
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 33 HTNNGTAVYP-PHTYHPVPSGGAHPTGVAPPP 125
H +A++P P T+HPVP +PT +AP P
Sbjct: 1027 HIIPASAIHPGPFTFHPVPHAALYPTLLAPRP 1058
>sp|P25304|AGRI_RAT AGRIN PRECURSOR
pir||AGRT agrin - rat
Length = 1959
Score = 32.3 bits (72), Expect = 4.4
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 54 VYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
VYP HT PV A PT PP + + +TP +QP
Sbjct: 1181 VYPSHTSRPVGRTTAPPTTRRPPTTATNMDRPRTPGHQQP 1220
>gb|AAA40702.1| (M64780) agrin [Rattus norvegicus]
Length = 1937
Score = 32.3 bits (72), Expect = 4.4
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 54 VYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
VYP HT PV A PT PP + + +TP +QP
Sbjct: 1178 VYPSHTSRPVGRTTAPPTTRRPPTTATNMDRPRTPGHQQP 1217
>pir||T13049 eyelid - fruit fly (Drosophila melanogaster)
gb|AAC06254.1| (AF053091) eyelid [Drosophila melanogaster]
Length = 2715
Score = 32.3 bits (72), Expect = 4.4
Identities = 18/38 (47%), Positives = 19/38 (49%), Gaps = 4/38 (10%)
Frame = +3
Query: 57 YPPHTYHPVPS--GGAHPTGVAPPPPHSGSEGG--KTPQGEQ 170
YPP Y P P GA+ TG PPP GG P G Q
Sbjct: 656 YPPGNYPPRPQYPPGAYATGPPPPPTSQAGAGGANSMPSGAQ 697
>emb|CAA74577.1| (Y14166) attachment region binding protein [Gallus gallus]
Length = 344
Score = 32.3 bits (72), Expect = 4.4
Identities = 15/43 (34%), Positives = 17/43 (38%)
Frame = +3
Query: 21 VPVDHTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGG 149
V + G PP P+P AHP APP H GG
Sbjct: 235 VKMPFAGGGAPASPPAPPTPLPPSAAHPPPTAPPATHGQGLGG 277
>gb|AAA40703.1| (M64780) agrin [Rattus norvegicus]
Length = 1940
Score = 32.3 bits (72), Expect = 4.4
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 54 VYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
VYP HT PV A PT PP + + +TP +QP
Sbjct: 1181 VYPSHTSRPVGRTTAPPTTRRPPTTATNMDRPRTPGHQQP 1220
>gb|AAF50995.2| (AE003575) CG15635 gene product [Drosophila melanogaster]
Length = 1047
Score = 32.3 bits (72), Expect = 4.4
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 24 PVDHTNNGTAVYPPHTYHPVPSG----GAHPTGVAPPPPHSGSEGGKTPQGEQP 173
P H + +YPP T PSG G HP G + PP+SG G P P
Sbjct: 274 PGSHKPPNSGIYPPSTGWIPPSGSLSQGGHPPG-SQLPPNSGLPPGSIPPLRPP 326
>sp|P04474|PRP3_RAT ACIDIC PROLINE-RICH PROTEIN PRP33 PRECURSOR
pir||PIRT3 acidic proline-rich protein precursor - rat
gb|AAA41949.1| (K02247) proline-rich protein [Rattus norvegicus]
Length = 206
Score = 32.3 bits (72), Expect = 4.4
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 24 PVDHTNNGTAVYPPHTYHPVPSGG----AHPTGVAPPPPHSGSEGGK---TPQGEQP 173
P H N P H + P PSGG + P PPP G +G PQG P
Sbjct: 80 PPPHGGNHQRPPPGHHHGPPPSGGPQTSSQPGNPQGPPPQGGPQGPPQPGNPQGPPP 136
>pir||CGBO1S collagen alpha 1(I) chain - bovine (tentative sequence)
(fragments)
Length = 779
Score = 32.0 bits (71), Expect = 5.8
Identities = 16/30 (53%), Positives = 18/30 (59%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EG K P+GE
Sbjct: 448 PGPSGNAGPPG---PPGPAGKEGSKGPRGE 474
>ref|NP_113687.1| proline rich protein 2 [Mus musculus]
pir||A28996 proline-rich protein M14 precursor - mouse
gb|AAA53048.1| (M23236) proline-rich protein [Mus musculus]
Length = 317
Score = 32.0 bits (71), Expect = 5.8
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 4/38 (10%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAP----PPPHSGSEGGKTPQGEQP 173
PP HP P+ G PTG P PP +G + PQG P
Sbjct: 222 PPGGPHPRPTQGPPPTGPQPRPTQGPPPTGGPQQRPPQGPPP 263
>pir||D29149 proline-rich protein - mouse (fragment)
gb|AAA40002.1| (M19419) proline-rich salivary protein [Mus musculus]
Length = 188
Score = 32.0 bits (71), Expect = 5.8
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 4/38 (10%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAP----PPPHSGSEGGKTPQGEQP 173
PP HP P+ G PTG P PP +G + PQG P
Sbjct: 93 PPAGPHPRPTQGPPPTGPQPRPTQGPPPTGGPQQRPPQGPPP 134
>sp||CA11_BOVIN_2 [Segment 2 of 2] COLLAGEN ALPHA 1(I) CHAIN
Length = 634
Score = 32.0 bits (71), Expect = 5.8
Identities = 16/30 (53%), Positives = 18/30 (59%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EG K P+GE
Sbjct: 303 PGPSGNAGPPG---PPGPAGKEGSKGPRGE 329
>sp|Q01456|OAM_ASCSU OVARIAN ABUNDANT MESSAGE PROTEIN (OAM PROTEIN)
pir||A48461 ovarian abundant message protein oam - common roundworm
gb|AAA73355.1| (M94771) [Ascaris lumbricoides mRNA sequence.], gene product
Length = 590
Score = 32.0 bits (71), Expect = 5.8
Identities = 15/32 (46%), Positives = 17/32 (52%), Gaps = 3/32 (9%)
Frame = +2
Query: 305 HL*CS*ACDRWCWHERRHWSLGHCRFRC---CLPH 400
H+ CS R+C H HCR RC CLPH
Sbjct: 537 HMLCSSTRSRYCSHRLGAACRSHCRLRCGVLCLPH 571
>emb|CAB61840.1| (AJ242804) putative glycine and proline-rich protein [Sporobolus
stapfianus]
Length = 197
Score = 32.0 bits (71), Expect = 5.8
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAPPPPHSG--SEGGKTPQGEQP 173
PP Y P P P G PPPP G GG G P
Sbjct: 49 PPGAYPPPPGAYPPPPGAYPPPPQHGYPQHGGYPQHGGYP 88
>emb|CAB94564.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 423
Score = 32.0 bits (71), Expect = 5.8
Identities = 15/35 (42%), Positives = 18/35 (50%), Gaps = 1/35 (2%)
Frame = +3
Query: 60 PPHTYHPVP-SGGAHPTGVAPPPPHSGSEGGKTPQG 164
PP P+P +G P APPPP G + PQG
Sbjct: 317 PPGAQPPMPVAGQGQPGWYAPPPPQQGGQPFAAPQG 352
>sp|P05143|PRP3_MOUSE PROLINE-RICH PROTEIN MP-3
gb|AAA40005.1| (M12100) proline-rich protein MP-3 [Mus musculus]
Length = 296
Score = 32.0 bits (71), Expect = 5.8
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 4/38 (10%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAP----PPPHSGSEGGKTPQGEQP 173
PP HP P+ G PTG P PP +G + PQG P
Sbjct: 201 PPGGPHPRPTQGPPPTGPQPRPTQGPPPTGGPQQRPPQGPPP 242
>gb|AAB63335.3| (U83658) FH1/FH2 protein homolog [Aspergillus nidulans]
Length = 1790
Score = 31.6 bits (70), Expect = 7.6
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 45 GTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
G A PP P P GG PPPP G GG P P
Sbjct: 1048 GAAPPPPPPPPPPPPGGLGGPPPPPPPPPPGGFGGPPPPPPPP 1090
>sp|P22357|ASF1_HELAN ANTHER-SPECIFIC PROTEIN SF18 PRECURSOR
pir||S12246 anther-specific protein SF18 precursor - common sunflower
(fragment)
emb|CAA37455.1| (X53375) anther-specific protein SF18 [Helianthus annuus]
Length = 161
Score = 31.6 bits (70), Expect = 7.6
Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = +3
Query: 45 GTAVYPPHTYHPVPSGG------AHPTGVAPPPPHSGSEGGKTP 158
G A +PP T P P GG A P G PPP G GG P
Sbjct: 93 GDAPHPPPT--PSPPGGDGGSGPAPPAGGGSPPPAGGDGGGGAP 134
>sp|P02812|PRP2_HUMAN SALIVARY PROLINE-RICH PROTEIN PRECURSOR (CLONE CP7) [CONTAINS:
BASIC PEPTIDE P-F]
pir||PIHUPF salivary proline-rich glycoprotein precursor PRB2 - human
(fragment)
gb|AAA60189.1| (K03208) salivary proline-rich protein precursor [Homo sapiens]
Length = 251
Score = 31.6 bits (70), Expect = 7.6
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +3
Query: 30 DHTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGS---EGGKTPQGEQP 173
D+ + + P P P GG P G PPP +GG PQG P
Sbjct: 2 DNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP 52
>gb|AAF37297.1|AF232239_1 (AF232239) HES-related repressor protein 2 HERP2 [Homo sapiens]
Length = 304
Score = 31.6 bits (70), Expect = 7.6
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 33 HTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTP 158
H N GT P +H G AHP A P SGS G P
Sbjct: 201 HGNAGTTASPTEPHHQGRLGSAHPEAPALRAPPSGSFGPVLP 242
>ref|NP_036390.1| hairy/enhancer-of-split related with YRPW motif 1; hairy and
enhancer of split related-1 [Homo sapiens]
ref|XP_005050.1| hairy/enhancer-of-split related with YRPW motif 1 [Homo sapiens]
sp|Q9Y5J3|HEY1_HUMAN HAIRY/ENHANCER-OF-SPLIT RELATED WITH YRPW MOTIF 1 (HAIRY AND
ENHANCER OF SPLIT RELATED-1) (HESR-1) (CARDIOVASCULAR
HELIX-LOOP-HELIX FACTOR 2) (HES-RELATED REPRESSOR
PROTEIN 2 HERP2)
gb|AAD38967.1|AF151522_1 (AF151522) hairy and enhancer of split related-1 [Homo sapiens]
gb|AAD51749.1|AF176422_1 (AF176422) cardiovascular helix-loop-helix factor 2 [Homo sapiens]
emb|CAB75715.1| (AJ272214) HEY1 protein [Homo sapiens]
gb|AAG31156.1|AF311883_1 (AF311883) hairy-related transcription factor 1 [Homo sapiens]
gb|AAH01873.1|AAH01873 (BC001873) hairy/enhancer-of-split related with YRPW motif 1 [Homo
sapiens]
Length = 304
Score = 31.6 bits (70), Expect = 7.6
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 33 HTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTP 158
H N GT P +H G AHP A P SGS G P
Sbjct: 201 HGNAGTTASPTEPHHQGRLGSAHPEAPALRAPPSGSLGPVLP 242
>ref|NP_043392.1| putative [Human papillomavirus type 36]
gb|AAA79440.1| (U31785) putative [Human papillomavirus type 36]
Length = 241
Score = 31.6 bits (70), Expect = 7.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 93 GAHPTGVAPPPPHSGSEGGKTPQGEQ 170
G HP PPPP +G E G PQG +
Sbjct: 143 GHHPPPPPPPPPTNGHECGPKPQGPE 168
>sp|P39770|SALM_DROME HOMEOTIC PROTEIN SPALT-MAJOR
pir||S40022 spalt protein - fruit fly (Drosophila melanogaster)
emb|CAA53229.1| (X75541) spalt protein [Drosophila melanogaster]
Length = 1355
Score = 31.6 bits (70), Expect = 7.6
Identities = 15/32 (46%), Positives = 19/32 (58%), Gaps = 2/32 (6%)
Frame = +3
Query: 63 PHTYHPV--PSGGAHPTGVAPPPPHSGSEGGKTP 158
P + PV P+GGA P GV PPP H ++P
Sbjct: 740 PEHHSPVRSPAGGALPPGVPPPPHHHPHHMARSP 773
>pir||S46272 anther-specific protein - common sunflower
Length = 152
Score = 31.6 bits (70), Expect = 7.6
Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = +3
Query: 45 GTAVYPPHTYHPVPSGG------AHPTGVAPPPPHSGSEGGKTP 158
G A +PP T P P GG A P G PPP G GG P
Sbjct: 94 GDAPHPPPT--PSPPGGDGGSTPAPPAGGGSPPPAGGDGGGGAP 135
>gb|AAG46118.1|AC073166_16 (AC073166) putative protein phosphatase-2C; tRNA-Lys [Oryza sativa]
Length = 458
Score = 31.6 bits (70), Expect = 7.6
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +3
Query: 66 HTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
H++ G P GV P P S GG TP G +P
Sbjct: 79 HSFSDAGDGRFPPGGVEPETPPGSSSGGSTPVGGKP 114
>emb|CAA68709.1| (Y00724) prepro-alpha-2 chain [Homo sapiens]
Length = 765
Score = 31.6 bits (70), Expect = 7.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 84 PSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P+G A P G A P G GGK P+GE
Sbjct: 722 PNGFAGPAGAAGQPGAKGERGGKGPKGE 749
>gb|AAF53097.1| (AE003632) salm gene product [Drosophila melanogaster]
Length = 1373
Score = 31.6 bits (70), Expect = 7.6
Identities = 15/32 (46%), Positives = 19/32 (58%), Gaps = 2/32 (6%)
Frame = +3
Query: 63 PHTYHPV--PSGGAHPTGVAPPPPHSGSEGGKTP 158
P + PV P+GGA P GV PPP H ++P
Sbjct: 740 PEHHSPVRSPAGGALPPGVPPPPHHHPHHMARSP 773
>pir||CGHU2S collagen alpha 2(I) chain precursor - human
Length = 1366
Score = 31.6 bits (70), Expect = 7.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 84 PSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P+G A P G A P G GGK P+GE
Sbjct: 722 PNGFAGPAGAAGQPGAKGERGGKGPKGE 749
>gb|AAB50686.1| (S80905) Con1 [Homo sapiens]
Length = 382
Score = 31.6 bits (70), Expect = 7.6
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +3
Query: 30 DHTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGS---EGGKTPQGEQP 173
D+ + + P P P GG P G PPP +GG PQG P
Sbjct: 133 DNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP 183
>ref|XP_004658.3| collagen, type I, alpha 2 [Homo sapiens]
gb|AAB93981.1| (AF004877) pro-alpha 2(I) collagen [Homo sapiens]
Length = 1366
Score = 31.6 bits (70), Expect = 7.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 84 PSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P+G A P G A P G GGK P+GE
Sbjct: 722 PNGFAGPAGAAGQPGAKGERGGKGPKGE 749
>sp|P08123|CA21_HUMAN COLLAGEN ALPHA 2(I) CHAIN PRECURSOR
gb|AAB59374.1| (J03464) pre-pro-alpha-2 type I collagen [Homo sapiens]
Length = 1366
Score = 31.6 bits (70), Expect = 7.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 84 PSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P+G A P G A P G GGK P+GE
Sbjct: 722 PNGFAGPAGAAGQPGAKGERGGKGPKGE 749
>pir||T26281 hypothetical protein W08D2.6 - Caenorhabditis elegans
emb|CAA94234.1| (Z70271) predicted using Genefinder~contains similarity to Pfam
domain: PF01391 (Collagen triple helix repeat (20
copies)), Score=73.1, E-value=1.9e-18, N=2; PF01484
(Nematode cuticle collagen N-terminal domain),
Score=67.8, E-value=7.3e-17, N=1~cDNA E>
Length = 358
Score = 31.6 bits (70), Expect = 7.6
Identities = 15/34 (44%), Positives = 17/34 (49%)
Frame = +3
Query: 69 TYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQ 170
T HP G G PP +G +GG PQGEQ
Sbjct: 268 TGHPGAQGTPGHNGPTGPPGDAGPDGGPGPQGEQ 301
>pir||JT0754 extensin-like protein - potato
pir||S33209 extensin-like protein precursor - potato
emb|CAA79930.1| (Z21937) extensin [Solanum tuberosum]
Length = 291
Score = 31.2 bits (69), Expect = 9.9
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 48 TAVY---PPHTYHPVPSGGAHPTGV--APPPPHSGSEGGKTPQGEQP 173
T VY PPH +HPV PT V +PPPP + TP + P
Sbjct: 76 TPVYKSPPPHHHHPVYKSPPPPTPVYKSPPPPKTPHYPPHTPVYKSP 122
>sp|Q9XSJ7|CA11_CANFA COLLAGEN ALPHA 1(I) CHAIN PRECURSOR
gb|AAD34619.1|AF153062_1 (AF153062) type I collagen pre-pro-alpha1(I) chain [Canis
familiaris]
Length = 1460
Score = 31.2 bits (69), Expect = 9.9
Identities = 16/30 (53%), Positives = 18/30 (59%)
Frame = +3
Query: 78 PVPSGGAHPTGVAPPPPHSGSEGGKTPQGE 167
P PSG A P G PP +G EGGK +GE
Sbjct: 882 PGPSGNAGPPG---PPGPAGKEGGKGARGE 908
>gb|AAK38272.1|AF330197_1 (AF330197) Arkadia [Mus musculus]
Length = 989
Score = 31.2 bits (69), Expect = 9.9
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 57 YPPHTYHPVPSGGAHPTGVAPPPP-HSGSEGGKTPQGEQP 173
+P H +H S A VAPPPP H GS PQ P
Sbjct: 682 HPVHAFHSQISSHAASHPVAPPPPTHLGSTAAPIPQHLPP 721
>pir||S23447 annexin XI form B - bovine
emb|CAA77801.1| (Z11742) annexin XI [Bos taurus]
Length = 505
Score = 31.2 bits (69), Expect = 9.9
Identities = 20/53 (37%), Positives = 25/53 (46%), Gaps = 7/53 (13%)
Frame = +3
Query: 15 YTVPVDHTNNGTAVYPPHTYHPVPS-----GGAHPTGVAP--PPPHSGSEGGKTPQGEQP 173
Y P + +G YPP+ PVP G P GV P PP + P G+QP
Sbjct: 107 YPPPGGNPTSGMPSYPPYPGAPVPGQPMLPPGQQPPGVYPGQPPMTYPGQSPVPPPGQQP 166
>gb|AAD43607.1|AC005698_6 (AC005698) T3P18.6 [Arabidopsis thaliana]
Length = 297
Score = 31.2 bits (69), Expect = 9.9
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 63 PHTYHPVPS--GGAHPTGVAPPPPHSGSEGGKTP 158
PH P P GG G PPP H G GGK P
Sbjct: 33 PHPPVPKPPQHGGGGGGGSKPPPHHGGKGGGKPP 66
>sp|P27214|ANXB_BOVIN ANNEXIN A11 (ANNEXIN XI) (CALCYCLIN-ASSOCIATED ANNEXIN 50) (CAP-50)
pir||LUBO11 annexin XI form A - bovine
gb|AAA30379.1| (M82802) annexin [Bos taurus]
Length = 503
Score = 31.2 bits (69), Expect = 9.9
Identities = 20/53 (37%), Positives = 25/53 (46%), Gaps = 7/53 (13%)
Frame = +3
Query: 15 YTVPVDHTNNGTAVYPPHTYHPVPS-----GGAHPTGVAP--PPPHSGSEGGKTPQGEQP 173
Y P + +G YPP+ PVP G P GV P PP + P G+QP
Sbjct: 105 YPPPGGNPTSGMPSYPPYPGAPVPGQPMLPPGQQPPGVYPGQPPMTYPGQSPVPPPGQQP 164
>emb|CAB60182.1| (AL132824) hypothetical protein SCAH10.28 [Streptomyces coelicolor]
Length = 797
Score = 31.2 bits (69), Expect = 9.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQ 170
P T P P+ PT PPPP S +E + G Q
Sbjct: 31 PTPTPTPTPTSPPRPTSPLPPPPPSEAESARGQDGRQ 67
>pir||JH0481 basic proline-rich protein MnP4 - crab-eating macaque
gb|AAA36904.1| (M81321) proline-rich protein [Macaca fascicularis]
gb|AAA36905.1| (M81322) proline-rich protein [Macaca fascicularis]
Length = 188
Score = 31.2 bits (69), Expect = 9.9
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAPPPPHSG--SEGGKTPQGEQP 173
P + P GG P G PP G +GGK PQG P
Sbjct: 54 PGNAQGPPQQGGKKPQGPPPPGKPQGPPKQGGKKPQGPPP 93
>sp|P13983|EXTN_TOBAC EXTENSIN PRECURSOR (CELL WALL HYDROXYPROLINE-RICH GLYCOPROTEIN)
pir||S06733 hydroxyproline-rich glycoprotein precursor - common tobacco
emb|CAA32090.1| (X13885) extensin (AA 1-620) [Nicotiana tabacum]
Length = 620
Score = 31.2 bits (69), Expect = 9.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAPPPPHSG 137
PP +P PS G P V PPPH G
Sbjct: 72 PPRHAYPPPSHGHLPPSVGGPPPHRG 97
>pir||I50694 collagen alpha 1(III) chain - chicken (fragment)
gb|AAA83407.1| (U07973) alpha-1 collagen type III [Gallus gallus]
Length = 886
Score = 31.2 bits (69), Expect = 9.9
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 45 GTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQG 164
G + P P P G A P G PP +GS GGK G
Sbjct: 359 GASGNPGERGEPGPQGQAGPPGPQGPPGRAGSPGGKGEMG 398
>pir||A70525 hypothetical protein Rv0312 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB09584.1| (Z96800) hypothetical protein Rv0312 [Mycobacterium tuberculosis]
gb|AAK44548.1| (AE006939) hypothetical protein [Mycobacterium tuberculosis
CDC1551]
Length = 620
Score = 31.2 bits (69), Expect = 9.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAPPPP 128
PP T P+PS PT VAP PP
Sbjct: 502 PPSTVAPLPSAAPAPTTVAPAPP 524
>gb|AAB51284.1| (U91682) vitelline membrane protein homolog [Aedes aegypti]
Length = 122
Score = 31.2 bits (69), Expect = 9.9
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 60 PPHTYH--PVPSGGAHPTGVAPPPPHSGSEGGKTP 158
PP YH P P AHP PPP H G P
Sbjct: 25 PPKPYHAPPPPPHHAHPPPPPPPPAHYGHHAHPAP 59
>gb|AAK31343.1|AF348329_1 (AF348329) Brahma-associated protein 111kD [Drosophila
melanogaster]
Length = 749
Score = 31.2 bits (69), Expect = 9.9
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 19/51 (37%)
Frame = +3
Query: 21 VPVDHTNNGTAVYP------PHTYHPVPSGGAHP------------TGVAPPPPHSG-SE 143
VP+ G A P PH HP P P G+ PPPPH+G +
Sbjct: 517 VPLPQQQGGPAPPPGMPQMHPHPGHPPPGHSLMPPHMGPHQPPPGMPGLPPPPPHTGYAN 576
Query: 144 GGKTPQGEQP 173
G P G P
Sbjct: 577 YGGPPHGPPP 586
>gb|AAF46136.1| (AE003437) Spx gene product [Drosophila melanogaster]
Length = 347
Score = 31.2 bits (69), Expect = 9.9
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +3
Query: 21 VPVDHTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTP 158
VPV + N G PP PVP P + PPPP GG+ P
Sbjct: 248 VPVSNNNMGMLAPPP----PVPQPAPFPATI-PPPPLPPMTGGQPP 288
>gb|AAF46450.1| (AE003446) CG7055 gene product [Drosophila melanogaster]
emb|CAC20093.1| (AJ002520) DALAO protein [Drosophila melanogaster]
Length = 749
Score = 31.2 bits (69), Expect = 9.9
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 19/51 (37%)
Frame = +3
Query: 21 VPVDHTNNGTAVYP------PHTYHPVPSGGAHP------------TGVAPPPPHSG-SE 143
VP+ G A P PH HP P P G+ PPPPH+G +
Sbjct: 517 VPLPQQQGGPAPPPGMPQMHPHPGHPPPGHSLMPPHMGPHQPPPGMPGLPPPPPHTGYAN 576
Query: 144 GGKTPQGEQP 173
G P G P
Sbjct: 577 YGGPPHGPPP 586
>sp|P34304|YKQ9_CAEEL HYPOTHETICAL 70.5 KD PROTEIN C06E1.9 IN CHROMOSOME III
gb|AAA27929.1| (L16559) coded for by C. elegans cDNA CE2E8 (GenBank: Z14710);
putative [Caenorhabditis elegans]
Length = 627
Score = 31.2 bits (69), Expect = 9.9
Identities = 11/26 (42%), Positives = 18/26 (68%)
Frame = +3
Query: 87 SGGAHPTGVAPPPPHSGSEGGKTPQG 164
+G + P G++ PPP+ GS GG+ +G
Sbjct: 558 AGSSAPPGLSQPPPYQGSRGGRGGRG 583
>pir||D70509 hypothetical protein Rv1233c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB10930.1| (Z98260) hypothetical protein Rv1233c [Mycobacterium tuberculosis]
Length = 198
Score = 31.2 bits (69), Expect = 9.9
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +3
Query: 39 NNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
N+ YPP Y P G +PTG PP P GG P G P
Sbjct: 46 NHPPPAYPPSGYPPAYQPG-YPTGYPPPMP----PGGYAPPGYPP 85
>gb|AAD54275.1|AF169793_1 (AF169793) HET-C protein [Podospora anserina]
Length = 735
Score = 31.2 bits (69), Expect = 9.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 60 PPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTP 158
PP +H GG +P PPPP G G+ P
Sbjct: 694 PPPPHHHGQYGGGYPGQHPPPPPQGGGYPGQQP 726
>gb|AAK45529.1| (AE007003) hypothetical protein [Mycobacterium tuberculosis
CDC1551]
Length = 201
Score = 31.2 bits (69), Expect = 9.9
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +3
Query: 39 NNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTPQGEQP 173
N+ YPP Y P G +PTG PP P GG P G P
Sbjct: 49 NHPPPAYPPSGYPPAYQPG-YPTGYPPPMP----PGGYAPPGYPP 88
>gb|AAF34753.1|AF217845_1 (AF217845) DESERT [Drosophila melanogaster]
Length = 1178
Score = 31.2 bits (69), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (50%)
Frame = +3
Query: 12 TYTVPVDHTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPP 128
TY D T+ T++ P +Y P SGG + PPPP
Sbjct: 24 TYGTSGDSTSRYTSLATPSSYRPSFSGGTYRLKRDPPPP 62
>emb|CAA65831.1| (X97197) spliceosomal protein [Drosophila melanogaster]
Length = 366
Score = 31.2 bits (69), Expect = 9.9
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +3
Query: 21 VPVDHTNNGTAVYPPHTYHPVPSGGAHPTGVAPPPPHSGSEGGKTP 158
VPV + N G PP PVP P + PPPP GG+ P
Sbjct: 267 VPVSNNNMGMLAPPP----PVPQPAPFPATI-PPPPLPPMTGGQPP 307
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,980,635
Number of Sequences: 705144
Number of extensions: 4995864
Number of successful extensions: 26261
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 17909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25379
length of database: 222,175,239
effective HSP length: 117
effective length of database: 139,673,391
effective search space used: 21789048996
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)