(Linear) MAP of: ./Fgr-C_02_A01_T3.seq check: 7124 from: 1 to: 443 Fgr-C_02_A01_T3 0 0 0 1 443 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI Pfl1108I BbsI | | | | GAATTCGGCACGAGGAAACACAAGACGACACTGATTCTACGAAAACCATTATCCGTTACCTTTTTATCTTTGGTCTTCCTTTAGTAGTTCTCGTCATCTG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCTTTGTGTTCTGCTGTGACTAAGATGCTTTTGGTAATAGGCAATGGAAAAATAGAAACCAGAAGGAAATCATCAAGAGCAGTAGAC a E F G T R K H K T T L I L R K P L S V T F L S L V F L * * F S S S G - b N S A R G N T R R H * F Y E N H Y P L P F Y L W S S F S S S R H L - c I R H E E T Q D D T D S T K T I I R Y L F I F G L P L V V L V I W - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N P V L F C L V V S I R R F G N D T V K K D K T K R * Y N E D D - e I R C S S V C S S V S E V F V M I R * R K I K P R G K T T R T M Q - f F E A R P F V L R C Q N * S F W * G N G K * R Q D E K L L E R * R - BspLU11I Eco57I BbsI | BsrBI PstI | | | | | GAACAAATTATTTAGCAGCACCAAAACGGAGAGGACGACAGAAGCAAACATGTCTTCAGGAAGAATCGCCCCGCTCGTATTTCCTGCAGCATCGCAGCAC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CTTGTTTAATAAATCGTCGTGGTTTTGCCTCTCCTGCTGTCTTCGTTTGTACAGAAGTCCTTCTTAGCGGGGCGAGCATAAAGGACGTCGTAGCGTCGTG a T N Y L A A P K R R G R Q K Q T C L Q E E S P R S Y F L Q H R S T - b E Q I I * Q H Q N G E D D R S K H V F R K N R P A R I S C S I A A H - c N K L F S S T K T E R T T E A N M S S G R I A P L V F P A A S Q H - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d P V F * K A A G F R L P R C F C V H R * S S D G R E Y K R C C R L V - e F L N N L L V L V S L V V S A F M D E P L I A G S T N G A A D C C - f S C I I * C C W F P S S S L L L C T K L F F R G A R I E Q L M A A - NgoAIV SgrAI BsaI BspGI Eco47III NarI | | | | | | ACTGCCACAGTCATCTTTGTTCACGGTCTCGGTGACACTGGACATGGCTGGGCAAGCGCTGTTGAGAACTGGCGCCGGCGACAGAAGATGGATGAGGTCA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TGACGGTGTCAGTAGAAACAAGTGCCAGAGCCACTGTGACCTGTACCGACCCGTTCGCGACAACTCTTGACCGCGGCCGCTGTCTTCTACCTACTCCAGT a L P Q S S L F T V S V T L D M A G Q A L L R T G A G D R R W M R S - b C H S H L C S R S R * H W T W L G K R C * E L A P A T E D G * G Q - c T A T V I F V H G L G D T G H G W A S A V E N W R R R Q K M D E V K - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S G C D D K N V T E T V S S M A P C A S N L V P A P S L L H I L D - e V A V T M K T * P R P S V P C P Q A L A T S F Q R R R C F I S S T - f C Q W L * R Q E R D R H C Q V H S P L R Q Q S S A G A V S S P H P * - SalI BsmI EcoRV BsaXI | | | | | AGTTCATTCTGCCCCATGCACCCCAAATCCCTATCAGCGTGAACATGGGAATGAGAATGCCTGGATGGTTTGATATCAAACAACTTGGAGGTGATGTCGA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TCAAGTAAGACGGGGTACGTGGGGTTTAGGGATAGTCGCACTTGTACCCTTACTCTTACGGACCTACCAAACTATAGTTTGTTGAACCTCCACTACAGCT a S S F C P M H P K S L S A * T W E * E C L D G L I S N N L E V M S T - b V H S A P C T P N P Y Q R E H G N E N A W M V * Y Q T T W R * C R - c F I L P H A P Q I P I S V N M G M R M P G W F D I K Q L G G D V D - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d L E N Q G M C G L D R D A H V H S H S H R S P K I D F L K S T I D - e L N M R G W A G W I G I L T F M P I L I G P H N S I L C S P P S T S - f T * E A G H V G F G * * R S C P F S F A Q I T Q Y * V V Q L H H R - Bpu1102I | CTCTCTCATCCGCAACGAGGACACCGAGGGCATTAAGCTCAGC 401 ---------+---------+---------+---------+--- 443 GAGAGAGTAGGCGTTGCTCCTGTGGCTCCCGTAATTCGAGTCG a L S S A T R T P R A L S S - b L S H P Q R G H R G H * A Q - c S L I R N E D T E G I K L S - 401 ---------+---------+---------+---------+--- 443 d V R E D A V L V G L A N L E A - e E R M R L S S V S P M L S L - f S E * G C R P C R P C * A * - Enzymes that do cut: BbsI Bpu1102I BsaI BsaXI BsmI BspGI BspLU11I BsrBI BssSI Eco47III Eco57I EcoRI EcoRV NarI NgoAIV Pfl1108I PstI SalI SgrAI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI Bce83I BcgI BclI BfiI BglI BglII BplI BpmI Bpu10I BsaBI BsbI BseRI BsgI BsiWI BsmBI BspEI BspMI BsrDI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI EarI EciI EcoNI FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NcoI NdeI NheI NotI NruI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SacI SacII SanDI SapI ScaI SexAI SfiI SgfI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI