(Linear) MAP of: ./Fgr-C_02_A02_T3.seq check: 5651 from: 1 to: 571 Fgr-C_02_A02_T3 0 0 0 1 571 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI BsbI DraI | | | | GAATTCGGCACGAGGTACAACTACAACAATCGCTATACCAACACTCGTTTAAATAACCTCGATCTACTTCTCTTTCAACCTTTTACTCAAACCAAACCCA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCATGTTGATGTTGTTAGCGATATGGTTGTGAGCAAATTTATTGGAGCTAGATGAAGAGAAAGTTGGAAAATGAGTTTGGTTTGGGT a E F G T R Y N Y N N R Y T N T R L N N L D L L L F Q P F T Q T K P N - b N S A R G T T T T I A I P T L V * I T S I Y F S F N L L L K P N P - c I R H E V Q L Q Q S L Y Q H S F K * P R S T S L S T F Y S N Q T Q - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I R C S T C S C C D S Y W C E N L Y G R D V E R E V K * E F W V W - e F E A R P V V V V I A I G V S T * I V E I * K E K L R K S L G F G - f N P V L Y L * L L R * V L V R K F L R S R S R K * G K V * V L G - ACAAACCAAACCAACCTTCAAAATGCACGCCTCCGCTGCCGTCCTCGCTTTCGTCGCTGTTGCGGCTGCTGCCCAGACCCCTGTGGCCCCCGTTGCTACT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TGTTTGGTTTGGTTGGAAGTTTTACGTGCGGAGGCGACGGCAGGAGCGAAAGCAGCGACAACGCCGACGACGGGTCTGGGGACACCGGGGGCAACGATGA a K P N Q P S K C T P P L P S S L S S L L R L L P R P L W P P L L L - b T N Q T N L Q N A R L R C R P R F R R C C G C C P D P C G P R C Y S - c Q T K P T F K M H A S A A V L A F V A V A A A A Q T P V A P V A T - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d C V L G V K L I C A E A A T R A K T A T A A A A W V G T A G T A V - e V F W V L R * F A R R R Q R G R K R R Q Q P Q Q G S G Q P G R Q * - f L L G F W G E F H V G G S G D E S E D S N R S S G L G R H G G N S S - BspEI DrdII | DrdII | | | CCCATCGCTACTCCCGGTGCCCCTACCAACGGTACTAAGCCCGGTCACGGCTCTGGCTCTGGTTCCGGATCTGGTTCCGGCTCCGGCTCCCAGACCCCCT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GGGTAGCGATGAGGGCCACGGGGATGGTTGCCATGATTCGGGCCAGTGCCGAGACCGAGACCAAGGCCTAGACCAAGGCCGAGGCCGAGGGTCTGGGGGA a P S L L P V P L P T V L S P V T A L A L V P D L V P A P A P R P P - b H R Y S R C P Y Q R Y * A R S R L W L W F R I W F R L R L P D P L - c P I A T P G A P T N G T K P G H G S G S G S G S G S G S G S Q T P S - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d G M A V G P A G V L P V L G P * P E P E P E P D P E P E P E W V G - e E W R * E R H G * W R Y * A R D R S Q S Q N R I Q N R S R S G S G R - f G D S S G T G R G V T S L G T V A R A R T G S R T G A G A G L G G - NarI BsrDI BplI | | | CCGGCGCCGCCGCCCTTGGCCTCAGTGGTCTTGCTGGTGCCCTCGCCATTGCTCTTGCTCTGTAAATGTCTTTCAATGAGACTTTCTCAGAGTTGGTGGA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GGCCGCGGCGGCGGGAACCGGAGTCACCAGAACGACCACGGGAGCGGTAACGAGAACGAGACATTTACAGAAAGTTACTCTGAAAGAGTCTCAACCACCT a P A P P P L A S V V L L V P S P L L L L C K C L S M R L S Q S W W I - b R R R R P W P Q W S C W C P R H C S C S V N V F Q * D F L R V G G - c G A A A L G L S G L A G A L A I A L A L * M S F N E T F S E L V D - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d E P A A A R P R L P R A P A R A M A R A R Y I D K L S V K E S N T S - e R R R R G Q G * H D Q Q H G R W Q E Q E T F T K * H S K R L T P P - f G A G G G K A E T T K S T G E G N S K S Q L H R E I L S E * L Q H - BamHI HgiEII BsaXI BpmI | | | | TATGAGGATCCTGCGACAGACAACCTTGTAGGGTTCTGGAGGAATCGTGCTGGTGCGCGTTTAACTTTCGATGGAGATAGATCGGGTTTTCGATTGTCCC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 ATACTCCTAGGACGCTGTCTGTTGGAACATCCCAAGACCTCCTTAGCACGACCACGCGCAAATTGAAAGCTACCTCTATCTAGCCCAAAAGCTAACAGGG a * G S C D R Q P C R V L E E S C W C A F N F R W R * I G F S I V P - b Y E D P A T D N L V G F W R N R A G A R L T F D G D R S G F R L S R - c M R I L R Q T T L * G S G G I V L V R V * L S M E I D R V F D C P - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d I L I R R C V V K Y P E P P I T S T R T * S E I S I S R T K S Q G - e Y S S G A V S L R T P N Q L F R A P A R K V K S P S L D P K R N D - f I H P D Q S L C G Q L T R S S D H Q H A N L K R H L Y I P N E I T G - BpmI VspI | | GACTAGAATAGAATAGATCAATGGAGCGTGATCGCTCCAGCTACATTAATACTAATCGCATACCACCAAAA 501 ---------+---------+---------+---------+---------+---------+---------+- 571 CTGATCTTATCTTATCTAGTTACCTCGCACTAGCGAGGTCGATGTAATTATGATTAGCGTATGGTGGTTTT a T R I E * I N G A * S L Q L H * Y * S H T T K - b L E * N R S M E R D R S S Y I N T N R I P P K - c D * N R I D Q W S V I A P A T L I L I A Y H Q - 501 ---------+---------+---------+---------+---------+---------+---------+- 571 d S * F L I S * H L T I A G A V N I S I A Y W W F - e R S S Y F L D I S R S R E L * M L V L R M G G F - f V L I S Y I L P A H D S W S C * Y * D C V V L - Enzymes that do cut: BamHI BplI BpmI BsaXI BsbI BspEI BsrDI BssSI DraI DrdII EcoRI HgiEII NarI VspI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BbsI Bce83I BcgI BclI BfiI BglI BglII Bpu10I Bpu1102I BsaI BsaBI BseRI BsgI BsiWI BsmI BsmBI BspGI BspLU11I BspMI BsrBI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraIII DrdI EagI EarI EciI Eco47III Eco57I EcoNI EcoRV FseI FspI HindIII HpaI KpnI MfeI MluI MscI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I XbaI XcmI XhoI XmnI