(Linear) MAP of: ./Fgr-C_02_A03_T3.seq check: 7647 from: 1 to: 494 Fgr-C_02_A03_T3 0 0 0 1 494 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI EarI Bce83I Bce83I Bce83I | | | | | | GAATTCGGCACGAGGCTCTCTTCAATATACTTAGTACCTATAATAACTCAAGAATCTCAAGTCATCATGGGTGCTAAATCGGGCACCGCCCTCAAGTTCC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCGAGAGAAGTTATATGAATCATGGATATTATTGAGTTCTTAGAGTTCAGTAGTACCCACGATTTAGCCCGTGGCGGGAGTTCAAGG a E F G T R L S S I Y L V P I I T Q E S Q V I M G A K S G T A L K F L - b N S A R G S L Q Y T * Y L * * L K N L K S S W V L N R A P P S S S - c I R H E A L F N I L S T Y N N S R I S S H H G C * I G H R P Q V P - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N P V L S E E I Y K T G I I V * S D * T M M P A L D P V A R L N - e I R C S A R K L I S L V * L L E L I E L * * P H * I P C R G * T G - f F E A R P E R * Y V * Y R Y Y S L F R L D D H T S F R A G G E L E - BsrDI BcgI| BcgI DrdII| BsmI BsrBI | || | | | TGCAATGGTTCATTCGAGGCATTCAATTCGCTTGCGCCGCTCTCATCCTTGCCATCTACTCCTACTTCCTAGCAACTCTCCATAACCACAACCTCTCAAT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ACGTTACCAAGTAAGCTCCGTAAGTTAAGCGAACGCGGCGAGAGTAGGAACGGTAGATGAGGATGAAGGATCGTTGAGAGGTATTGGTGTTGGAGAGTTA a Q W F I R G I Q F A C A A L I L A I Y S Y F L A T L H N H N L S I - b C N G S F E A F N S L A P L S S L P S T P T S * Q L S I T T T S Q S - c A M V H S R H S I R L R R S H P C H L L L L P S N S P * P Q P L N - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d R C H N M R P M * N A Q A A R M R A M * E * K R A V R W L W L R E I - e A I T * E L C E I R K R R E * G Q W R S R S G L L E G Y G C G R L - f Q L P E N S A N L E S A G S E D K G D V G V E * C S E M V V V E * - EagI BseRI BglI| BseRI | NgoAIV|| | | ||| CAGCAACAAAATCCGTGCTGTGGAGGGCATTTCTGGAATCGCTGTTCTCTACACTGCCGCTGCTCTGCTCCTCCTCTGCTGCCTTGCCGGCCGCACCCTC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GTCGTTGTTTTAGGCACGACACCTCCCGTAAAGACCTTAGCGACAAGAGATGTGACGGCGACGAGACGAGGAGGAGACGACGGAACGGCCGGCGTGGGAG a S N K I R A V E G I S G I A V L Y T A A A L L L L C C L A G R T L - b A T K S V L W R A F L E S L F S T L P L L C S S S A A L P A A P S - c Q Q Q N P C C G G H F W N R C S L H C R C S A P P L L P C R P H P L - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d L L L I R A T S P M E P I A T R * V A A A R S R R Q Q R A P R V R - e * C C F G H Q P P C K Q F R Q E R C Q R Q E A G G R S G Q R G C G - f D A V F D T S H L A N R S D S N E V S G S S Q E E E A A K G A A G E - MscI BstXI EcoRV BsgI NheI PvuII EcoRV | | | | | | | TCATCTTTACTGGCCATTATGTTGGATATCGCCTTTATCGGCGCTTTCATCTACGTTGCTGTCGCCAACAAGGGCGGTGCTAGCAGCTGCACTGGATATC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 AGTAGAAATGACCGGTAATACAACCTATAGCGGAAATAGCCGCGAAAGTAGATGCAACGACAGCGGTTGTTCCCGCCACGATCGTCGACGTGACCTATAG a S S L L A I M L D I A F I G A F I Y V A V A N K G G A S S C T G Y L - b H L Y W P L C W I S P L S A L S S T L L S P T R A V L A A A L D I - c I F T G H Y V G Y R L Y R R F H L R C C R Q Q G R C * Q L H W I S - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d E D K S A M I N S I A K I P A K M * T A T A L L P P A L L Q V P Y - e R M K V P W * T P Y R R * R R K * R R Q Q R W C P R H * C S C Q I D - f * R * Q G N H Q I D G K D A S E D V N S D G V L A T S A A A S S I - BfiI | TCGACACTCCCTTTGGACGTGGAAAGGCTGGTAATACCGCCGAGGGAAGCGACGGTTTCACTGCTCTGCCCAGTTACCGTACCGCCTGCAAGCT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---- 494 AGCTGTGAGGGAAACCTGCACCTTTCCGACCATTATGGCGGCTCCCTTCGCTGCCAAAGTGACGAGACGGGTCAATGGCATGGCGGACGTTCGA a D T P F G R G K A G N T A E G S D G F T A L P S Y R T A C K - b S T L P L D V E R L V I P P R E A T V S L L C P V T V P P A S - c R H S L W T W K G W * Y R R G K R R F H C S A Q L P Y R L Q A - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---- 494 d R S V G K P R P F A P L V A S P L S P K V A R G L * R V A Q L S - e R C E R Q V H F P Q Y Y R R P F R R N * Q E A W N G Y R R C A - f E V S G K S T S L S T I G G L S A V T E S S Q G T V T G G A L - Enzymes that do cut: Bce83I BcgI BfiI BglI BseRI BsgI BsmI BsrBI BsrDI BssSI BstXI DrdII EagI EarI EcoRI EcoRV MscI NgoAIV NheI PvuII Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BclI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BsiWI BsmBI BspEI BspGI BspLU11I BspMI BsrGI BssHII Bst1107I BstEII Bsu36I ClaI DraI DraIII DrdI EciI Eco47III Eco57I EcoNI FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI NarI NcoI NdeI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI